Tact017266.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638224.1:6046007-6067260[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5e-07 0.00047 20.7 0.0 1 37 12 48 12 55 0.88 2 3 2.8e-07 0.00027 21.5 0.0 1 42 76 117 76 119 0.92 3 3 1.7e-10 1.5e-07 31.9 0.0 1 42 141 182 141 184 0.93
Sequence Information
- Coding Sequence
- ATGACCGAGAAAACGAAAAAGGTTCGCAGGTACACTGAAGAAGAACTAAAACAAGCTATAATTGACATACGGGTAAACGGAAAGTCAATAAAAGAGGCCGGTGGAGTATATGGGATTCCTCTATCGACAATGTACGGTCGATTATATGGGATTGTCAAAACTGAAGGACTAGACATGCTCTCGACTCCGAATGTGAGCGTGAAAAAGAAAAAGGTTTGCAGGTACACTGAAGAGGAACTAAAACAAGCTATCCATGAAATACAGGTGAACGGAAAGCCAATAAGAGAGACCTGTCGATTATATGGGATTCCTCCATCGACAATGCAGACTCGATTAAATGGGATTGTCAAAACTGAAGGACTAGATCCTATGCTCTCGACCCCGAATGTGAGCGTGAAAAAGAAAAAGGTTTGCAGGTACACTGAAGAGGAACTACAACAAGCTATCCATGAAATACGGGTGAACGGAAAGCCAATAAGAGAGGCCTGTCGATTATATGGGATTCCTCAATCGACAATGCAGTCTCGATTAAATGGGATTGTCGAAGCTAGAGAACTAGATCCTGCACTAGGAGtggaaaatgaaaaaaagattAAAGAGTGGATTTTAAAAAGAGCCAAATTTggatttccaataaaaaagcaGGAGCTTCTGGATGCTGTCCAAAAAATTGTGAAAGATTCTGGAAAGAGAAATTCTTTTAAGGACGACCGTACAGGAAAATCTTGGTATAAGAATTTTTTAAAGCGAAATCCCAAATTACGTAATATTACAATAGTAGGGAAGAATAGGTGTAGCACACGAATAACTGAAGAATCGATAAGAAATTGGTTCAATGGATTAGAAACCTTTTTAGAAGAAACTGATAATAAGGATATATTAGAACACTCAGAACGCATTTTTAATGGATGTGAAAGTAGCTTTTCTATGTCTACTAAAACTGGAAAAATTATGACACCAATGGCATTAGATAGTTTGTTCCAGCTTAAATTGTGTAAGGAAACAAAACCTATTACAGTGTTAGTCATTTTCAACGCTAATACCCAGATATGTCCACCGCTGGTTGTTATTCCATACATACGCCCCCCGAAAACAGTTATAGAGAGGATGCCCCCAGAATGGTGCCTGGGGCTATCGGAAAGTGGGTTGATTAAGTCGGACATATTGTTCAGATATATCACGAACGATTTTGATAAATGGGTAGAGCACAATTCTATAAAAAAGCCAATATTGCTGCTATACGGTGGTGATAGTTCGCACATTTCACAAGATTTGAGCACAAAACGCATGAAGAAAAAGAGCAAGAGAAAAGGTTTtgtacagcggttgcacgtcccctcgcTCCAAGTGCACCTCACAAATATTCGAGGTCTGCACTCAAACCTTACCTCAGTCCACCACCATCTAGAGGCTGAGAAGCCCCActtgctctttttgacggagacgcagataCGATGTCCATCAAGCTTGGCATACCTAGACTACCCTGGATACACTTTAGAGCACAATTTCCActctcgcgccggagtctgtgtgtatgcccgcaacgacatctgTTGCCAGCGTCTCCGTCATCTTGAAGACCCCACTTTTTCCACTATTTGGGTCTTGGTAGATACAGGGACTGACAAGATCTTGTACTCCTGTGTCTATCGATCGCACGGCGGTGATCAGGAGACAACCCGACTATTTGAGCACCTCAGCGGGATGGCTGATGTGGCACTGCATCGGCACCCTACTGCGCAActggtttttctgggggacttcaacgcctgtcatcaagactggctgttcccataccagaaaaccgaccatgccgGGAGAGAAGCGAGGACTTTTGCCCTATCGCTTggcctctcccagctggtaaagcaagcgacTAGGGTGCCTGACGTTGATGGTCACACAGCAAAttgcctggaccttctgctgacaaccgatccagacagATATGTTGTTGAAGTTTCCTCCCCACTGGGAACCTCcgaccactgtctggtgaagTCTGTTTCGTCATATTCCGTTCCTGATCACGTACCAGGAGGTACGCGGAGGGTATGGCattacaagtcagcagattgggatgagatgcgacattTCTTCGCATCCTATCCTTGGCGACAGGTCTGCTTTTCTTCTGAAGATCCGTCGAGCTctgcggatgctataaccgatgtggttcgtCAGGGAATGGagtattttatccctttttctgaCGTTCCTAccggtggcaaagctcgcccatggttcaacgCCGAATGCGCTCAAGCTGAAAAGCGCAAACACTCGGCGTACCTCGCCTGGGTTGATGCTCGgaaccgcaaagctccggatataaGACCAAAGAAGAAAGCCTTTAACCGTGCCGCCAAGtcctacaaaaaggcattacggaAGGTTAGTAGCGACCGCATAATACATATCGGCGCCAAGCTCTCTGACCAACCATCtggcagtagagctttttggtccctcgccaaggcggtcgagactaacttctgtcgTCCCGTGCTGCCGCCGCTGGTAAAACCTGATGGCTCCCTGGCTCATTCGGCGAAAGAGAAAGCGAACCTGTTTgcatctctttttgctgagaattcgcgtctagACACTGGCAATAACCATCCACCACCGATACCTCATTGTGGTACTTCTATGTCGGAGGTCCACATATACAATAAGGAGGTCCTAAAAATCTtgcgaagtctagacgtgaaAAAAGCCAGTGGACCTGACGACGTAGCCCACGGGCGACACGCGTACTCGTTCCCCGCCACCTTGGGTCCCCACCTCGTGGTTGACTCCGAGGAGTCAGGGCATCGGCGCACCAGTCCTCAGTGCGCACCCGACGTTCCGCTGCCGGCGCGGGTTGTGGACTCCGTTTCCACGCCCTATCTGCGGAGCGTCAAGTCGGGGGTTATCGAACCCAGCGTGACGTGA
- Protein Sequence
- MTEKTKKVRRYTEEELKQAIIDIRVNGKSIKEAGGVYGIPLSTMYGRLYGIVKTEGLDMLSTPNVSVKKKKVCRYTEEELKQAIHEIQVNGKPIRETCRLYGIPPSTMQTRLNGIVKTEGLDPMLSTPNVSVKKKKVCRYTEEELQQAIHEIRVNGKPIREACRLYGIPQSTMQSRLNGIVEARELDPALGVENEKKIKEWILKRAKFGFPIKKQELLDAVQKIVKDSGKRNSFKDDRTGKSWYKNFLKRNPKLRNITIVGKNRCSTRITEESIRNWFNGLETFLEETDNKDILEHSERIFNGCESSFSMSTKTGKIMTPMALDSLFQLKLCKETKPITVLVIFNANTQICPPLVVIPYIRPPKTVIERMPPEWCLGLSESGLIKSDILFRYITNDFDKWVEHNSIKKPILLLYGGDSSHISQDLSTKRMKKKSKRKGFVQRLHVPSLQVHLTNIRGLHSNLTSVHHHLEAEKPHLLFLTETQIRCPSSLAYLDYPGYTLEHNFHSRAGVCVYARNDICCQRLRHLEDPTFSTIWVLVDTGTDKILYSCVYRSHGGDQETTRLFEHLSGMADVALHRHPTAQLVFLGDFNACHQDWLFPYQKTDHAGREARTFALSLGLSQLVKQATRVPDVDGHTANCLDLLLTTDPDRYVVEVSSPLGTSDHCLVKSVSSYSVPDHVPGGTRRVWHYKSADWDEMRHFFASYPWRQVCFSSEDPSSSADAITDVVRQGMEYFIPFSDVPTGGKARPWFNAECAQAEKRKHSAYLAWVDARNRKAPDIRPKKKAFNRAAKSYKKALRKVSSDRIIHIGAKLSDQPSGSRAFWSLAKAVETNFCRPVLPPLVKPDGSLAHSAKEKANLFASLFAENSRLDTGNNHPPPIPHCGTSMSEVHIYNKEVLKILRSLDVKKASGPDDVAHGRHAYSFPATLGPHLVVDSEESGHRRTSPQCAPDVPLPARVVDSVSTPYLRSVKSGVIEPSVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -