Tact018788.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638225.1:18018835-18024773[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.7e-11 6.3e-08 33.1 0.0 4 39 48 84 46 88 0.90 2 4 8.9e-12 8.3e-09 35.9 0.2 3 39 101 137 99 141 0.92 3 4 4e-13 3.8e-10 40.2 0.1 4 43 157 197 154 199 0.94 4 4 8e-19 7.5e-16 58.5 0.1 2 42 207 248 206 250 0.95
Sequence Information
- Coding Sequence
- ATGCGATATTCTGTACCACCCTCAGAACACCACCTGAGCGGCGACGACACGAGCGATTCtggcgggggcggcggcggcgggggcgggaGCGGCGGGGCGGGGGGCAGCGCGCGCGGCTCGCCCAAGTCCTGGTCACAGCGGGACATGGACAGCGCGCTCGACGCACTTAGGAACCACCACATGAGTCTCACCAAGGCATCGGCAACATACGGCATCCCGTCCACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGACGGCGCCGCCAAGTCGTGGGGCGACGCCGACCTGCGCGCCGCGCTCGCCGCGCTGCGCGGGGGACGCATCTCCGCCAACAAGGCCAGCAAGGCTTACGGCATCCCCAGCAGCACGCTGTACAAGATAGCGCGGCGGGAGGGCATCCGGCTGTCCGCGCCGTTCAACGCGGCGCCCACCGCGTGGCGGCGCTGCGACCTGTCCCGCGCGCTGGCCGCCATCCGCTGCGGCGCGGCGTCCGTCGCGCGCGCGGCCGCGGCCTTCGGCATCCCCGCCGGCACGCTGTACGGCCGCTGCAAGCGCGAGGGCATCGGGCTCGCGCGCGCCAACCCCGCGCCCTGGTCCGAGGGGGCCATGGCCGAGGCGCTCGAGGCTGTCAGGGTGGGCCAGATGTCCATCAACCAGGCGGCCATCCACTACAATCTGCCCTACTCCTCGCTGTACGGCCGCTTCAAGCGCTGCAAGTACCAGATCCAGGGCCCCCCGCCCCCACCGCACCCGCCGCCGCCGGAGCTGTCCCCGGAGCCGCGCGAGCAGTGGGAGCAGCCCGGCTGCCCGGCGGCCCCCGCGGAGCCCTACAGCCACATGTTCCCGGAGTGCGAGCAGTACTACGCCTGCAGCCCCATCTCCAGTTGA
- Protein Sequence
- MRYSVPPSEHHLSGDDTSDSGGGGGGGGGSGGAGGSARGSPKSWSQRDMDSALDALRNHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKDGAAKSWGDADLRAALAALRGGRISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRCDLSRALAAIRCGAASVARAAAAFGIPAGTLYGRCKREGIGLARANPAPWSEGAMAEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQIQGPPPPPHPPPPELSPEPREQWEQPGCPAAPAEPYSHMFPECEQYYACSPISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -