Basic Information

Gene Symbol
kn
Assembly
GCA_951805285.1
Location
OX638224.1:12430788-12440186[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-122 2.6e-118 396.8 0.0 205 387 1 201 1 204 0.99
2 2 2e-07 0.0014 18.0 0.6 420 471 210 264 202 295 0.84

Sequence Information

Coding Sequence
ATGAGAAGATTTCAAGTGGTAATATCAACGCAAGTGATGGTCGACGGACCTCTGCTCGCGATATCAGACAACATGTTCGTGCACAATAACAGCAAACATGGCCGCCGAGCGAAACGTCTCGACCCTACAGAAGGTACTGACGCCGCGCCCGAACATACTTCGGGTTTATACCCACCGTTACCAGTAGCAACACCTTGTATTAAAGCCATATCACCGAGCGAAGGATGGACGTCAGGAGGTTCGACAGTAATAATTGTAGGCGATAACTTCTTCGATGGACTTCAAGTAGTATTCGGAACTATGCTTGTTTGGAGTGAGTTAATAACATCACACGCAATACGAGTCCAAACGCCGCCGCGTCACATCCCCGGCGTGGTTGAAGTGACTCTCTCCTACAAAAGCAAACAGTTCTGCAAAGGAGCACCGGGAAGATTTGTCTATGTTTCAGCACTCAACGAGCCTACGATAGATTACGGCTTTCAGAGGCTCCAGAAACTTATACCCAGACATCCGGGCGACCCGGAAAAACTACCTAAGGAAATCATACTGAAGCGGGCAGCGGACTTAGCCGAGGCGTTGTATTCGATGCCTCGTAACAACCAGCTAGGGTTGGGCGCGCCGCGCTCCCCGCCAGCCAGTATGCCTTTCAACTCCTACACTGGCCAACTGGCAGTCAGCGTTCAGGACACCGCAGCTTCGCAGTGGACTGAAGAGGAGTacgcgcgcggcggcggcggatcTGTGTCGCCGCGGTACTGCTCGGCCGCGAGTACCCCGCACGCGCCCGCGTACCCCCCGCAGCACTACCCCGCGCCGCCTACCTCGCTCTTTAATACTACCTCACTGTCTCTAGGACCCTACCACCCAGCCAACGCGACGCATTTATCGTCTGACCATCACCACTATAACGCGTATAACGCGAAAGATAGCGGCCATTACAGTGAAAGAAACGGGAAATGTAAGAACGCGACCGAGTATCAAGCAAACACTCATGCAAAATTCACCGGCGACGATATGAAAGACCAACTGGGTAAAGAGACTAAGCTAAGAAGCGCCTTTGCGGTTGTCAGACATTCGCCCGTCAATTTTCAACATCAACAGAATTGGCAACATCTAGCCGTCCAGTGTTAG
Protein Sequence
MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPEHTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARGGGGSVSPRYCSAASTPHAPAYPPQHYPAPPTSLFNTTSLSLGPYHPANATHLSSDHHHYNAYNAKDSGHYSERNGKCKNATEYQANTHAKFTGDDMKDQLGKETKLRSAFAVVRHSPVNFQHQQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00277115;
90% Identity
iTF_01359503;
80% Identity
-