Basic Information

Gene Symbol
-
Assembly
GCA_951805285.1
Location
OX638214.1:14106245-14120697[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-10 7.2e-07 30.4 0.0 4 89 267 338 264 338 0.84

Sequence Information

Coding Sequence
ATGTGCTGCTCGCCTGTGCTCTGCAACTCTTGTGCTAGATGCAAAGTAacttgcgtgatatttgccgagaccccccctctctccaacGACGAAGTGCTAGCAATCAACGACAAAGTGGTAGTGCGGGCGGAGGACCTCGTCAGCTGGGTGTGGAGCGGCGCGGGCTGGCGCTGGGGGCTGCGGGCCGTGTGGCGCGGCGCCTGCGCCCCGCCCGCCGAGACGCAGCCCTCCGCGCCGCTGCACCAGGCCAAGCTCGACTTCAGCGATGTGGACCAGGAGAAGAACGCTATGACGGTGGACTCGGACAGCCCAGGGGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGGTACCGCGCGCTGCTGAGCCGGCTGGAGGGCGTGCAGGGCGACTGGCTGCGGGACTCGCTGGTGGCCGCGCTCGGGGGGTACGCCGCGCCCACCACCAATACCAGGATACTGTATTGTAAGGACACGTTCGAGTACCCGGAGCTAGAAGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGAAGCTGAAGGGCCGGCCGCggggccgccgccgccgcgccccgTCCCGGGAACGCGACCGGGACCGGGACCACTCGCGGTCCTCGCGCTCCAGCGATAGTGATGCGCCTGTACCGCACTGCGCGCCGACTGAGTTTGCGACCCCGAGAAGACTGTCGCTCCGCAACGGCGCGGAGAGACGCAACCTGAGCGAGGAGGAGCGCGGGGGCGGCGAGCGCGGGGAGGCGCGCGGGGAGATCGGGGAGAGGCGCGAGGAGAGCGCGGAGGACGTGGCGTTCGTCACGCAGCTGCGGACGTTCTACGCGCGCAGCGAGCGGGCGCACGCGTTGCGAGCCGTGCCGCACTTGTCTCTGCGCTCGCTGTACGCGGGTGTGGTGTCGCGCGGCGGGTACGAGGCCGTGTGTCGCCGGCGGCTGTGGCGCGCGCTGCACGCCGACCAGCCCGCGCGGACCCGACGGCTGTATGAGAAATACCTCCTCCCCTTCGAGAACCACGAGCGGCGGAACGGCTCGAAGCTATACAAGCTGAACGGGCTGCACGAGCCGCCCACCATCGCCACCATCGACGTCACGGACTCCCCGCTACGGGACGCGCCGCCGGGGGGACCGGGGGGACCGCCGGGGGCCGAACCCCCCAGCGACAAGCGGCTGCGGACCCCCGAGCCCGACGACAAGTATAAGGAGGAGAAGATTGTGGATAATGAGACGGGAGAGGTGACGACCAAGGATGAACTGAACATAACATCGAAGCCCGCTGAGGAGTTGAACAGGGAATTTCTGGACTCCTTGCCCAAGGAACCCGCCAAAATCACTGTCAAACCGGTGGAGCAGCTACTAGAGCGTCGGTACGAGGGGGGCGCGCGGCTAGAGAACGGCTCGCCCGTCGaacccgccgcccccgcccccgcccccgccgcgcCCATAGACCTCGCCGACCGGCTACACTTAGGTAATTCAGAGGCAGCATCGCGCGAACTCCCACCCCCTAGCGCGGCGGCCACTGCGCTAAGCAGTCTGTCCTCTCTAGGGGACAAATACGCTGTCAACGGTCACGCTACGCCCCCCGGAGAACAGAAAGTGCGTCCCGGGAAGAGTTCGTTGCGCGCGGTGCGGGTCAAACCGATACGCACGCCGCTTGCGAGCAGTTCTGCCAATACACCGCCCAACCCGCCCACGAGCACGAGCACGAGCACGAGCGCGAGCGCGGAGCCGCCCACCGTCACCAACTTCGGCATCcaccgcccgccgcccgcgcaGCACGAGGACGACGACATCGTAGAGGTGCCGTACAAACCGAAAACCCCAGAGATTATAGACTTGGACGAGTACCCTGAAAGCCCGCAGGCCGTCAAGAAGAAGAAGCTCGACATTCTCAAGGAACGGGGACTGGAAGTAACTGCCGTCCCCCCCACCTGGACCCCGCTCAACCCCATCACCCCCCTCATTACACCGAACCCCCTCATGCTGAACCCCGCCGTTCAGCATCAGATCATGAGCCAAGCTCAGATCTTTCAAATGTACAACATCATCCCCCCGAACTATCCGAATGGCGTACAACCGCCGAAAGTGTTTCAAGCGACGAGCATCTTCGGGTCCTCTGGTCCGGAGAAGACGGTGTACGGGAACCCCAAGGACCCCTTCATGCCGCCGCCGCACATCCTCCACGGCACCCCGGTCAAGCCGCAGAGGATTCAGACCCCGACGACACCGCCTCAGGATATCCTAGACTTAACCTGCAAGACCTCCCCGGGGCCCAAGCCGGCCGTCGAGATAGTCCGGGTTCCCTCCGCACCGTCCCCGTCCAAAACCCTATCTGCAGCTCAGAACCTATCCAAAAACTACACCCTCGTGGACGGGAAGGCCGTCGTCGGCTCCAACCTGGAGATAACGTTAGTCAATCCAAAGACCCAGCCGCAGACCCCGAAGCGGCCGACCCAGAAGCGGTCCTCCAACGGCAAGTTCGTGTCGGCGAAGACCCCGACGCCTCCCAAAGACATCCCAAAGCCGTACCAGTCGCCAGCTAAGAAGAACCCGATCGTGGTGCCCAACTTCCAGTCCAACTCCCGCGACGACGTGTCTCCCACCAGCTCGACGGGTTCCAGCAACTCGCAGACCGCTCAAAGCAATCTCCTGAACGCTTTCAAGGGACAGAATCTAGCCCAACTGATCGAGATGCAGAAGAATGTTCCGAACATGAGCCAATTCATCGACCCCATGTACATGAGCGCGTTCTACAACTCCCTCGGCCAGATGGACCAACGGCAGCTGGCCATGTATCGAGACTTCATGGCCAACCAGTTCAGAGGGTACTCCGGCCTGCTGAACATAGGCACCCCCACGACGAAGAATTAG
Protein Sequence
MCCSPVLCNSCARCKVTCVIFAETPPLSNDEVLAINDKVVVRAEDLVSWVWSGAGWRWGLRAVWRGACAPPAETQPSAPLHQAKLDFSDVDQEKNAMTVDSDSPGVVVFSYPRYCRYRALLSRLEGVQGDWLRDSLVAALGGYAAPTTNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAPSRERDRDRDHSRSSRSSDSDAPVPHCAPTEFATPRRLSLRNGAERRNLSEEERGGGERGEARGEIGERREESAEDVAFVTQLRTFYARSERAHALRAVPHLSLRSLYAGVVSRGGYEAVCRRRLWRALHADQPARTRRLYEKYLLPFENHERRNGSKLYKLNGLHEPPTIATIDVTDSPLRDAPPGGPGGPPGAEPPSDKRLRTPEPDDKYKEEKIVDNETGEVTTKDELNITSKPAEELNREFLDSLPKEPAKITVKPVEQLLERRYEGGARLENGSPVEPAAPAPAPAAPIDLADRLHLGNSEAASRELPPPSAAATALSSLSSLGDKYAVNGHATPPGEQKVRPGKSSLRAVRVKPIRTPLASSSANTPPNPPTSTSTSTSASAEPPTVTNFGIHRPPPAQHEDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTAVPPTWTPLNPITPLITPNPLMLNPAVQHQIMSQAQIFQMYNIIPPNYPNGVQPPKVFQATSIFGSSGPEKTVYGNPKDPFMPPPHILHGTPVKPQRIQTPTTPPQDILDLTCKTSPGPKPAVEIVRVPSAPSPSKTLSAAQNLSKNYTLVDGKAVVGSNLEITLVNPKTQPQTPKRPTQKRSSNGKFVSAKTPTPPKDIPKPYQSPAKKNPIVVPNFQSNSRDDVSPTSSTGSSNSQTAQSNLLNAFKGQNLAQLIEMQKNVPNMSQFIDPMYMSAFYNSLGQMDQRQLAMYRDFMANQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00795484;
90% Identity
iTF_01438683;
80% Identity
-