Tbat007176.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- stc
- Assembly
- GCA_905147785.1
- Location
- LR990496.1:8385002-8392136[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.8 2.3e+04 -4.0 1.6 15 19 457 461 456 461 0.81 2 12 0.031 3.9e+02 1.7 1.2 2 10 488 496 488 496 0.93 3 12 5.7e-06 0.072 13.6 16.2 4 19 504 519 502 519 0.93 4 12 2.5e-08 0.00032 21.1 13.2 1 19 555 573 555 573 0.97 5 12 1.4 1.8e+04 -3.6 2.4 7 11 577 581 577 582 0.89 6 12 0.00052 6.5 7.4 13.8 1 19 614 632 614 632 0.98 7 12 7.3e-05 0.92 10.1 10.6 1 19 673 695 673 695 0.87 8 12 2 2.5e+04 -5.0 2.2 6 10 725 729 725 729 0.94 9 12 0.0044 56 4.4 7.5 1 11 735 745 735 749 0.92 10 12 0.064 8e+02 0.7 0.3 2 10 762 770 762 770 0.91 11 12 8.1e-10 1e-05 25.9 13.8 1 19 776 794 776 794 0.99 12 12 0.0081 1e+02 3.5 15.8 1 18 833 849 833 850 0.85
Sequence Information
- Coding Sequence
- ATGTCCCAGTGGAATAATTCGTACGCATATAACCAGTACCAAGGAGCTAGCAATAGCTGGAATGGGGATGTGAATAGGCAGTACATGAATCAAAACTATTATCCCAATAGACAAGAACCTAGTAATCAATATGTGAGTTTCAATGAGTTTCTGACTCAGATGCAAGGTGCCAGTGCAATGCAACCTAGTACAGCCAACTTGAACCAAGCTCAGTTTGAGAACTACCCTGCAAATCGGTATGAATTTCAAAATATGCCATCAACCTCTCAAAATGATAGCTACAATTATACAGCTAGTAACACCCCTAGTGTGCCCAATGAGTCAGATTATCATCAGGTACAACAGCAATATATGCCTGAACAAAGTTCTTTTTCGAATGAAATAATACTCAAATCAAATCTTACACCTACTGCTATGGAATTTGTGCCAAAAAATACTGCAGTGCAACCATCTGGGAGTAATCAGAACATTCCAGAAAGAGTACAGGCTAGCCAACCCAGCAACAATAGTGGGAATGAAGCAAGGAGTCACCATAGCAATTCTTCAGAGACAAACTGGAGAGAAAGACCATCAAACTCTCAGAATGGTGATGGGTCAAGTAAACAAGAATCAAATGGCCGTTCTCAGGAAACCTACCGAAACCAGGAGAATGGTCGCAATAGGGACACAAACTATCGCAACAATGAATCTAACGGTCGGTATTATGAATCAAATAACCGTAACAATGATCAAAACAATAGGAACTATGAGGGTGGCAGCCGTAATAATGATTCAAACAACCGTAGTTATGACTCCAACTCTCGTAATGAGTCTAACTCTCGCAGTCATGAGACTAATAGCCGTTTTGATAATCGCAACGAAAAGAGGAATCAATCCAAACAAAATACAAAAGCAAAGGGGAAAGATTCTGATGCACGCACATTCTATAATAGTGCTATTAATAAAGATAGTCAGGATGTAAGAAATGGAAGGAATGAAGGTGGTGGTCGCAATAGAAACTGGGCTGGGAGCCAAAGACTAAAAGCCACTGAACGCAATAGCGTAGAAGATGAAGAGTATGCTAATACATATTTGCAACGTAAAGATGAAAGAGTTGAGAGGGTATCTAAGACTAAAAATGTACAATCCAGTCCATCTAGATCGAAAAGTAAAGCTTCATCAGAACAAGCAATTTCAGCCAACGTAGAGATGACCCAGCGCGAACGATTGACGGAGCAGCTAGACAAGGGCACGTTGGAGTGCCTAGTCTGTTGCGAACGAGTCAAACAGACCGACCCCGTCTGGTCCTGTGGGAACTGTTACCACGTCCTGCATCTGAGGTGTATCAGGAAATGGGCAATGAGCAGTATGGTCGAGGGCAAGTGGCGTTGTCCAGCCTGCCAGAACACCAGCTCGGAGGTTCCCACCGAGTACAGGTGCATGTGCGGTGCGACCCGAGGGCCTGAACACCGAGCTGGGGGTGGAGCCCACACCTGCGGCCGGGCCTGTCGCCGCGCCCGCACTTGTGTGCATCCCTGTACCCTGCTGTGTCATCCGGGGCCTTGCCCTCCTTGCCAGGCGACCGTGCAAAAACAGTGCGGCTGCGGTGCGGAAACCCGGTCGGTGTTATGCAGCAGTAAGCTATCCCAGGTCTGCGGGCGCGTGTGCCAGCGCGTGCTCGAGTGCGGAGTCCACACGTGCACTAAGGACTGCCACGAGGGTCCATGCGATACTTGCACTCAGTTTGTTGAACAGGTGTGCCACTGTCCGGTAGCCAAGTCTCGGTCTGTAGCGTGCACGTCCACGACGGGCACGTGCCCGAGCTGGGCGTGCGGCGCGGCGTGCTCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGACACGTGCCACCCGCCGCCCTGCAGGGACTGTCCCCTGCTGCCTGCCGCTGTGCTCACGTGCCCCTGTGGGAATACTAGGTTAGACAAGGAGCAACGTAAATTATGCACGGACCCGATACCTCTGTGCGGGAACATCTGCGCCAAGCCGCTGCCTTGCGGCCCGGCCGGGGACAAACACTTCTGCAAACTCGACTGCCATGAAGGTGCATGTCCCGATTGCCCTGAGAAGACCCTTCTCCAATGCCGTTGCGGGCACTCGAGCCGCGAAGTGCCTTGCGTCGATCTACCGGAAATGTACAACAATGTACTATGTCAGAAGAAGTGTAATAAGAAGTTATCCTGCGGTCGTCACCATTGCCGCGCGGTGTGCTGTGCTGCGGGGGCCGGGGCGGGGGTCGGGGCGGGGTCGGGGTCCGGGGCCGGGGCGCATCGTTGCCTGGCTGCATGTTCCCGGTCGTTGCCCTGCGGTACCCACCGGTGTGAGGAGCTGTGCCATACAGGGAGGTGTGCGCCGTGTCCGAGACTCAGTTTCGAGGAGTTGACGTGCGAATGTGGTGCCGAGGTGGTCCTGCCCCCCGTGCGGTGCGGAACCAAGCCCCCCGCGTGCTCCGCCCCGTGCCGCCGGCCCCGCGCCTGCGGACACGCCCCGCACCACTCGTGCCACTCGGGGGACTGTCCCCCCTGCGTCGTGCTCACCGCCAAGCACTGCCACGGCCGGCACGAGCGTCGTGACTACCCTTGGTGGTCCTGCCCCCCGCGTGCTCCGCCCCGTGCCGCCGGCCCCGCGCCTGCGGACACGCCCCGCACCACTCGTGCCACTCGGGGGACTGTCCCCCCTGCGTCGTGCTCACCGCCAAGCACTGCCACGGCCGGCACGAGCGTCGTGACTACCCTTGGTGGTCCTGCCCCCCGCGTGCTCCGCCCCGTGCCGCCGGCCCCGCGCCTGCGGACACGCCCCGCACCACTCGTGCCACTCGGGGGACTGTCCCCCCTGCGTCGTGCTCACCGCCAAGCACTGCCACGGCCGGCACGAGGTCAGTTACATGGGTGTCTATAG
- Protein Sequence
- MSQWNNSYAYNQYQGASNSWNGDVNRQYMNQNYYPNRQEPSNQYVSFNEFLTQMQGASAMQPSTANLNQAQFENYPANRYEFQNMPSTSQNDSYNYTASNTPSVPNESDYHQVQQQYMPEQSSFSNEIILKSNLTPTAMEFVPKNTAVQPSGSNQNIPERVQASQPSNNSGNEARSHHSNSSETNWRERPSNSQNGDGSSKQESNGRSQETYRNQENGRNRDTNYRNNESNGRYYESNNRNNDQNNRNYEGGSRNNDSNNRSYDSNSRNESNSRSHETNSRFDNRNEKRNQSKQNTKAKGKDSDARTFYNSAINKDSQDVRNGRNEGGGRNRNWAGSQRLKATERNSVEDEEYANTYLQRKDERVERVSKTKNVQSSPSRSKSKASSEQAISANVEMTQRERLTEQLDKGTLECLVCCERVKQTDPVWSCGNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTSSEVPTEYRCMCGATRGPEHRAGGGAHTCGRACRRARTCVHPCTLLCHPGPCPPCQATVQKQCGCGAETRSVLCSSKLSQVCGRVCQRVLECGVHTCTKDCHEGPCDTCTQFVEQVCHCPVAKSRSVACTSTTGTCPSWACGAACSRVLACGAHVCRDTCHPPPCRDCPLLPAAVLTCPCGNTRLDKEQRKLCTDPIPLCGNICAKPLPCGPAGDKHFCKLDCHEGACPDCPEKTLLQCRCGHSSREVPCVDLPEMYNNVLCQKKCNKKLSCGRHHCRAVCCAAGAGAGVGAGSGSGAGAHRCLAACSRSLPCGTHRCEELCHTGRCAPCPRLSFEELTCECGAEVVLPPVRCGTKPPACSAPCRRPRACGHAPHHSCHSGDCPPCVVLTAKHCHGRHERRDYPWWSCPPRAPPRAAGPAPADTPRTTRATRGTVPPASCSPPSTATAGTSVVTTLGGPAPRVLRPVPPAPRLRTRPAPLVPLGGLSPLRRAHRQALPRPARGQLHGCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -