Tbat010768.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thyatira batis
Gene Symbol
-
Assembly
GCA_905147785.1
Location
LR990509.1:1253252-1256610[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00068 0.051 14.5 0.4 1 21 97 117 97 118 0.94
2 8 0.00068 0.051 14.5 0.4 1 21 176 196 176 197 0.94
3 8 0.00068 0.051 14.5 0.4 1 21 255 275 255 276 0.94
4 8 0.00068 0.051 14.5 0.4 1 21 334 354 334 355 0.94
5 8 0.00068 0.051 14.5 0.4 1 21 413 433 413 434 0.94
6 8 0.00068 0.051 14.5 0.4 1 21 492 512 492 513 0.94
7 8 0.00068 0.051 14.5 0.4 1 21 571 591 571 592 0.94
8 8 0.00068 0.051 14.5 0.4 1 21 650 670 650 671 0.94

Sequence Information

Coding Sequence
ATGAAACTGCGAGGAGCTTCTAGTAGTAATGTTGACCCCCCTTCTCCTATGAAACTGCGAGCAGCTACTTGTAGCGGGCAGCATCGCAAGCCACCTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACCACCACTACCACGCTACACTACCGTACTGAACTCGCACACGCGCGCCGTGCTGCACACGTGCGACACGTGCGGCAAGCAGTTCGCCACCACCATGGTGCTCAAGCGCCACCAGCTGGTAACTACACCACCATCACACTACACTCCCCACCGTCACCATCATCACCACTACCACGCTACACTACCGTACTGA
Protein Sequence
MKLRGASSSNVDPPSPMKLRAATCSGQHRKPPELAHARRAAHVRHVRQAVRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHLRHHHGAQAPPAGNYTTITLHSPPSPSSPPPLPRYTTVLNSHTRAVLHTCDTCGKQFATTMVLKRHQLVTTPPSHYTPHRHHHHHYHATLPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01437641;
90% Identity
iTF_01437641;
80% Identity
iTF_01437641;