Basic Information

Insect: Thyatira batis
Gene Symbol: RREB1
Assembly: GCA_905147785.1
Location: LR990509.1:3714481-3725677[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.012 0.92 10.6 0.7 1 23 87 110 87 110 0.95

2 12 8 6e+02 1.7 0.9 1 11 152 162 152 173 0.84

3 12 0.021 1.5 9.9 0.1 1 23 300 322 300 322 0.97

4 12 0.0011 0.083 13.9 0.4 1 23 331 353 331 353 0.99

5 12 0.00069 0.051 14.5 2.0 1 23 359 382 359 382 0.97

6 12 0.0028 0.21 12.6 1.6 1 23 729 752 729 752 0.96

7 12 0.00023 0.017 16.0 1.3 2 23 947 968 946 968 0.97

8 12 0.024 1.8 9.7 5.3 1 23 974 997 974 997 0.97

9 12 0.034 2.5 9.2 1.4 1 23 1030 1054 1030 1054 0.93

10 12 0.049 3.7 8.7 0.1 1 23 1079 1102 1079 1102 0.95

11 12 0.021 1.6 9.8 0.3 2 23 1142 1163 1141 1163 0.92

12 12 0.026 2 9.5 5.3 1 23 1169 1191 1169 1191 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.012	0.92	10.6	0.7	1	23	87	110	87	110	0.95
2	12	8	6e+02	1.7	0.9	1	11	152	162	152	173	0.84
3	12	0.021	1.5	9.9	0.1	1	23	300	322	300	322	0.97
4	12	0.0011	0.083	13.9	0.4	1	23	331	353	331	353	0.99
5	12	0.00069	0.051	14.5	2.0	1	23	359	382	359	382	0.97
6	12	0.0028	0.21	12.6	1.6	1	23	729	752	729	752	0.96
7	12	0.00023	0.017	16.0	1.3	2	23	947	968	946	968	0.97
8	12	0.024	1.8	9.7	5.3	1	23	974	997	974	997	0.97
9	12	0.034	2.5	9.2	1.4	1	23	1030	1054	1030	1054	0.93
10	12	0.049	3.7	8.7	0.1	1	23	1079	1102	1079	1102	0.95
11	12	0.021	1.6	9.8	0.3	2	23	1142	1163	1141	1163	0.92
12	12	0.026	2	9.5	5.3	1	23	1169	1191	1169	1191	0.97

Sequence Information

Coding Sequence: ATGGCGGCAGACAGTTCTTCAGAATTTATGATGAAGAAAATCAAAACAGAGGAGGTCATCAGTGAAGCAAAAATTGAAGCCGATGAGAAAATGGACAGAATGATAATTGATAGGCAAGAACCCAGACCTACGAGGACGATAAGCATCGATAGCGACAATCGGTCCGACAGGAGTGAAGAGGATTATTCTAGAAGAGCTCGAAAACGACCTGCTTCAACGTCACCATCACCAATTCCATTGGACAAAAGGATTGCGCGATTCGAATGCCCAAAATGCAGAAAACGCTTCGATTCAGTTAACGCATTCGATGTCCACAGATTTACCGCCCACGGTGAGGACAGTCGCTCAGGCTTCGATGACTTAACATTCATCGATTTCTCAAGCAAAAAGTTCCCAGAAATAGCGCGAGGTATCTGCGAACGTAATCTTCATATATCCAAAACAGACCAACGCTACAGATGCGATTTATGTTATAAAGAGTTTCCATGTGGTCAGGCTTTAGACATGCACCGAAAGACATGCAGTTGTAATAGGATTCCAAGCCCCGAACGTGATCGCCGAGAGGATTTCCTTGCAAAATTAGAGCTTAAAAACAGACCATTCGGTATTCCGGGCACGCTGACCCCACCGATGGAAAGGTTTACGCCCAAATTTGATGACGGACATTGCATGTCTAACGGAATAAGACATATGGATGCCGCTCGCGACTTAGCAGATATTCCATCTATTCTCAATGTGATATCGGCTGGAAGTCTTTTAGAAAGACTAACAGGAACGAAGGTCGCTATGGAAAGCTCTGTGTTAACTCCTCCCGATACAATAGCAAAAGATAGAGATATGGAAGAGACCCAAGATAATTTTGCTGCGGAGTTTAGACGTATGAAGCTACGTGGTGAATTCCCATGCAGATTATGTCCTGCGAAGTTCCCTAATCTAAGAGCTTTGAAAGGCCACAATAGAGTCCACCTCAGTGGAACAGGGCCCGGCCCTTATCAATGCAATATGTGTCCTCACGCATCTTTAGACAAGGCAGCTCTCGTAAGACATATGCGAACACACAACGGGGATCGTCCATACGAATGCGCAGTTTGTAACTACGCATTTACAACAAAAGCTAATTGTGAACGTCACCTGCGAAACAGACATGCTAAAATAACAAGAGAAGATGTCAAACGTTCTATTATATACCACCCATCTGAAGATCCAAACAATGATGAAGTTAATTCGAAGCTAGCTAGAGATGAAGTCAAGCGATCTCTTGCCTTCCACACTCCAGAAATAGAGAGACGTAGTGATAGCACGGGCCGTGATACACCTCTGACTCACTTCACCCCCAGTTTTATAACTGAAAGGCACCCAGTGGCTTCTCTTACCTCAAAGCCTATGCCTGAAATACCGCTGATCCCGAGAGAGAGTGAACAACCACCGCCTAGAATCAAAGTGAAAGGTATTGGCCAATTAACCCAAATACCAGAGTACAGAACACCGGAAATTTCTTACAAATCTAATGATGTCCATTCTGATGATATGACATATGACGAGGAAGCACCAGTCGATCTAAGCACAAGCGATAACAACAGTTGTGATGTCCTTGATCTCAGCAAAAAGAAACTTGATGCTGATGCTGATGAGCCTAAATGTCCACCAAGACCATCCTTTGAACCAGACCACGCGTCAGTTGCTGCATCGGCATTTGAAAAGACGAGATTTCTTTTAGCGCAGCAGAGACTTTTTGAAAACTCTCTTCCAAAAATTGATCCTGCTTACTACGCTTCCCAATTATCTCAACTATACGCTGGTGGAGTCCCAGGCCTCCCTGGTCTACCTCTGCCACCGTCTTTTCCAATCAATCCCTATATTTTTCAACCATCTTTTTTTCCAACTAATTCTCAAGAACTTGCCGAAATGAAGCAGCGCATCCAAAAAGAAATAATACGCGGGTTAAGTATGTCCGGAGGCAGGCTTGTTGGTGGTGAACCAGAGCCCGAGCTCAAACAAGAACCTGAAGAAGAAGATCAGAAACCTGTGCCCCAAGTGATATCACCTGCCCCATCTCCCCATCCGGAATCTCCCCGCCCATTGAGCAATAGTCTCGTTCCTCAAACTGACTCTGTGAAAATGGTTATCAAAAATGGCGTACTAATGCCTAAACAGAAACAAAGACGGTATAGAACGGAGAGGCCATTTTCTTGTTCCCAATGCTCTGCACGGTTTACATTACGCTCCAACATGGAACGTCATGTTAAACAACAGCACCCTCAACATTGGAGTGTGAGGCGCCCTGCACCACGTGCACCCCCACCGTACCCCAGTGCTGATACACTAGCTGATCGGGTAAAGTTCGCTCTCTTAGCTCGCCATCTAGAAAGACCCCTGCAACAAACAGATCGCTCACCGATCCGTCGAGATTCCGACGAAGTTGCTGACAACGAGGAAGATGAAGAAGATACGTTGATCATCGATGAAGAACCAGAACTTGACATAAAATCCGAGGAACATACGGCTGCACGTCGTGCTGCTGCGGAAATATTAATGGCCACTTGTCAACAGGAAATGAATAAAGATTTCGATCTTAAAATAGCGGGTAATTTAATAAATAAGCCCGTACCTATGACGACTGAAAAGATAGAGGCAGGAACGGATCCTATTCCAATCGAAGAATCATTGCCTGTACCTGTGGTACCAACACGTAGTGATGAAGAAGAAGATGAGGAAGGCCTAGTCGCTTCAACTAGCGAGGGAAATAACTCTGGCAGTGACGAAAACAAGTCTGAATCCGATACCGGAGCACAACCACCGAAAAAAAAATCTGCATACAGCTTGGCCCCAAATCGCGTGTCATGCCCTTACTGCCACCGCAAGTTCCCCTGGTCCTCATCTCTCCGACGTCACGTCCTCACGCACACTGGCCAGAAGCCCTTCAAGTGTCCACACTGCCCTTTACTCTTCACAACAAAGTCTAACTGCGATCGTCATTTGTTGAGGAAACATGGTGGATCAGCCAGGGCTATCCTAGCTGAACCTATTCCAGACACTGTAACCACGCCACTACCAGTAAATGATATGAGAAATGTTCCAGACAGGCCTTTCAAATGTGCCACATGTCCAACGAGCACATTTTCTTCAATGGATACCTTAAAAAGGCACATGTCTTCGAGACATGGAGCTATCGATTCCCAGCCTAGTTCGCCTAATCCTGAAATAAACGAGGATATTCCAGATGGAGGATTGGTTTTCAAGTGCCATCTTTGTGAAGTGTCTTATGGGGATAGAAGCGCAGCTTTAGCGCATCTGGCTTCAGCGCATTCGGCAGAATATGAACTATTAGTAAGCAAAGGAGCTTTAGACGCAGCCAGTGATAAAAGTGAGAGTGCTGATGATGACGAAAGGGGGAAGTTTCCTGACCACGCAAATAGAAAGGTTGTCTGCGCATTCTGCATCCGTCGGTTCTGGTCCGCAGAAGACCTTCGCAGACATATGCGTACCCATTCTGGTGAGAGACCATTCGCCTGTGATCTATGCAGGAGACGGTTCACCTTGAAGCACAGCATGCTGCGACACCGCAAGAAGCACAGGGATGAAGTCACCGATGATGATGATGCTTCACCCCCAAATACGCCCATTGAAGACGGTGAAACTAATGGTTACCGCTACCAAGACGACGATGGCTCCGGCACCGACATACCAAGCAACGTGAACAACAACAACTCTCCACCATCCGCGCCCTACGAGAAGAAACTTAAGCTGGACATGACATCGCGCAAATACTCCTCTGAAACTGAAAACGATGTGGAAAATGGCAGTGATCTCATCGGGAAACTACTCGGCATCCCCGACAAAACGATAAACAAACTGCTATCGTCAGCAGATGAAGCCGCCAAAATACTCGGAGTGAACAAATGA
Protein Sequence: MAADSSSEFMMKKIKTEEVISEAKIEADEKMDRMIIDRQEPRPTRTISIDSDNRSDRSEEDYSRRARKRPASTSPSPIPLDKRIARFECPKCRKRFDSVNAFDVHRFTAHGEDSRSGFDDLTFIDFSSKKFPEIARGICERNLHISKTDQRYRCDLCYKEFPCGQALDMHRKTCSCNRIPSPERDRREDFLAKLELKNRPFGIPGTLTPPMERFTPKFDDGHCMSNGIRHMDAARDLADIPSILNVISAGSLLERLTGTKVAMESSVLTPPDTIAKDRDMEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKITREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPEIERRSDSTGRDTPLTHFTPSFITERHPVASLTSKPMPEIPLIPRESEQPPPRIKVKGIGQLTQIPEYRTPEISYKSNDVHSDDMTYDEEAPVDLSTSDNNSCDVLDLSKKKLDADADEPKCPPRPSFEPDHASVAASAFEKTRFLLAQQRLFENSLPKIDPAYYASQLSQLYAGGVPGLPGLPLPPSFPINPYIFQPSFFPTNSQELAEMKQRIQKEIIRGLSMSGGRLVGGEPEPELKQEPEEEDQKPVPQVISPAPSPHPESPRPLSNSLVPQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPSADTLADRVKFALLARHLERPLQQTDRSPIRRDSDEVADNEEDEEDTLIIDEEPELDIKSEEHTAARRAAAEILMATCQQEMNKDFDLKIAGNLINKPVPMTTEKIEAGTDPIPIEESLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGAQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDTVTTPLPVNDMRNVPDRPFKCATCPTSTFSSMDTLKRHMSSRHGAIDSQPSSPNPEINEDIPDGGLVFKCHLCEVSYGDRSAALAHLASAHSAEYELLVSKGALDAASDKSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHRDEVTDDDDASPPNTPIEDGETNGYRYQDDDGSGTDIPSNVNNNNSPPSAPYEKKLKLDMTSRKYSSETENDVENGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01083735;
80% Identity: -