Basic Information

Insect: Thyatira batis
Gene Symbol: -
Assembly: GCA_905147785.1
Location: LR990499.1:3769001-3775594[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 10 7.3 4.2 3 23 448 469 446 469 0.90

2 10 1.6e-06 0.00012 22.8 1.7 2 23 483 504 482 504 0.97

3 10 0.00037 0.027 15.4 2.5 1 23 514 536 514 536 0.99

4 10 2.7e-05 0.002 18.9 0.3 1 23 549 571 549 571 0.99

5 10 7.8e-05 0.0058 17.5 4.1 1 23 577 599 577 599 0.96

6 10 0.00013 0.0095 16.8 3.7 1 23 605 627 605 627 0.99

7 10 1.8e-05 0.0014 19.5 0.2 1 23 641 663 641 663 0.98

8 10 8.9e-05 0.0067 17.3 1.5 1 23 669 691 669 691 0.98

9 10 0.0017 0.13 13.3 3.8 1 21 697 717 697 719 0.95

10 10 3.1e-06 0.00023 21.9 1.2 1 22 725 746 725 746 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	10	7.3	4.2	3	23	448	469	446	469	0.90
2	10	1.6e-06	0.00012	22.8	1.7	2	23	483	504	482	504	0.97
3	10	0.00037	0.027	15.4	2.5	1	23	514	536	514	536	0.99
4	10	2.7e-05	0.002	18.9	0.3	1	23	549	571	549	571	0.99
5	10	7.8e-05	0.0058	17.5	4.1	1	23	577	599	577	599	0.96
6	10	0.00013	0.0095	16.8	3.7	1	23	605	627	605	627	0.99
7	10	1.8e-05	0.0014	19.5	0.2	1	23	641	663	641	663	0.98
8	10	8.9e-05	0.0067	17.3	1.5	1	23	669	691	669	691	0.98
9	10	0.0017	0.13	13.3	3.8	1	21	697	717	697	719	0.95
10	10	3.1e-06	0.00023	21.9	1.2	1	22	725	746	725	746	0.95

Sequence Information

Coding Sequence: ATGGAAGGTTTCTGCAGAGGTTGTTTAATCAAGTTCGATGATCCAACCGAATTGTTACAGTATACTGAGAAAAACAGGAGGCTTTTTGTTTACTCGACCGGCATACAGGTGAAACATAATGATGCATTCACATTTCTACTTTGTAAAGAGTGTAATATAAACATGAAAACATCCTGCAAATTCAAGAAACAATGTCGGACTTCAGACAAGAGGTTCAAGAATTATTTAGCTTTAAAAGACATGGGAGACAATATGGAGTTATGTACATTCCTTAAGAATAATGATGATACTTTGACATTCCGACTTCCCATATTAAGTGGCAACAGCACACCAGCAAATCAAAAATGCAGAGATGATGACAATGAATCAACATGCACCAGCATCCGCAACTTCATGTCAGATATACTACAAGGGGAAGAAGTACCCGATACAGAAGCGCGGATCATCCGCGAAGTGATAGAGGAGGAAGCGGATGTGTTGGACGACTCACTGGACTCGCACTGGTTGCAAGATGATATTTCTATTGATGAAGATTTACGATTGGATTTGAGTTTTAGTCCATTCTCGACGCCACATTCTGTAAATAACGACCACTGCTACACTCCTAAGAAAGTTACTGATACCATAGATCAATGTAAACCAATGAAATATTTTTGTTCTGAGGCAATTCTGGAAAATACTGACAATACAAAATATGAAGGTGTAGAAATGAATAATAAATTAAGCACACTATTGCCAATTGAAAACGTGGCTGACACAGAATACGAGAATGGAATAACATTAGAAAATAATGATAGCTTAGATAAAGTAAATCTGAAAGACGATTGTGAATTGATAGAATATGAAGATCTAATAGACAGTAGTATGTTACAAGAAAAGAACGCGCTTAATTATTATATTGAAAATATACCAATGGACAGTACTGAATTGAATATAAAAGATAATTTAAGTATAGAGAAAAATAAATGTTCCATTGACAAAAATTTAGAGGAAGCTTTGAAGAATGGCACAAATCAATCATTTTCATTGGATGAACTGCTTCTTTCTCCTCCAGTATTTCCTAATGTATCAGCGCCGTCAACTCCAACAATAACTAATATATTATTTGGCGATAAAATTAATATTGAGAATGAAAACTCAACAGTTGGACAGCATATAGAGGAGTATGATAATGTCGATGGAGATGTTGATATACTAGAAGAGTTCTTCAAAAATGAAACCATAGAGTTTACAAAAGATAAAGGAAACCATGAACAAGTAGACTTTATGGACAATGATGAAGAAGATAAAGATATACCAGAAAACACAAAACATATAGAATACGATTTAGACAAACTATTCTGCTTAGCATGTAAGAAACAATTTAAGACTGCAAAAGCATTTAAGAAACACTTAACACACAAACACAAAATCAAGTTAAAAAAAAGAAATAATTATAGTACTAAAGTGTGTAGTGAATGTGGTAAAACGTTTGGAGGAAGAGCTAATCTCCATAGGCATATGAAAACTCATAAAAAAACACAGAAACCTGTAGAAATATTTAAATGCGAACATTGTCCCATTGAGTGTAGTTCCTTGGCTTCATTATCTATGCACATGAAATCACACACAGGGGTTTACGTTGGCAAGGATACTGGCAGAAAATATGTTTGTACGATTTGCAATGCAGTAAGCACAACTGCCGGTAACTTCAAGATTCACCAGCGGAGACATCTTAAGAGCTATTCACACTTTTGTAAAGAGTGTCACAAAGGATTCTACAGAGCCGCCGATCTGAAAAAACATTTGGAATCACATAATGGAAATAACCCTTTTAAGTGTAAATATTGCGTTATTGAGTGTAATTCTTTATCGAATTTAAAAATGCACATGAAAACACACGGAGAGGCCGACGCCGCTGTAAAACAACCTGTTGGGAGATATGTTTGTCCCACGTGTGGTGCAAGAATCACAACTCTTAGCAACTTTGTTAGACACCAAAGGATACATACAAAGAGTTACACACACCGTTGTGATGAGTGTGGCAAAGGATTTTACAGTTTAACCGATGCTAATTACCATATGAGATCTCATATCGGTCTACGTCCTTTTGAGTGCCCACAGTGCGATCGCAAGTTCACTCTGCGGAATACACTGAACAATCATTTGAAATGTCACACAGGTGAGAGACGCTTCAACTGTGATTACTGTAAGAAGAGTTTCATAAGGAAAGCGACATTAACAAAGCATATAAAAATGTCCAAATCATGCTTTAAAGCGAGAATGCCCCATGACACTAAATTTGATGGAGAAGTATTAAGTTCGCACGAAACCGATATAGAAAATAATAGTCAAAATATAGATGAAATTGGACTAGACCCAGATAATGAATATTTGGATCAAGACGAAGTAGCTGATGATCAACATTTGCCTGAAACAGCGGAGGGTTTATTACAATACTGA
Protein Sequence: MEGFCRGCLIKFDDPTELLQYTEKNRRLFVYSTGIQVKHNDAFTFLLCKECNINMKTSCKFKKQCRTSDKRFKNYLALKDMGDNMELCTFLKNNDDTLTFRLPILSGNSTPANQKCRDDDNESTCTSIRNFMSDILQGEEVPDTEARIIREVIEEEADVLDDSLDSHWLQDDISIDEDLRLDLSFSPFSTPHSVNNDHCYTPKKVTDTIDQCKPMKYFCSEAILENTDNTKYEGVEMNNKLSTLLPIENVADTEYENGITLENNDSLDKVNLKDDCELIEYEDLIDSSMLQEKNALNYYIENIPMDSTELNIKDNLSIEKNKCSIDKNLEEALKNGTNQSFSLDELLLSPPVFPNVSAPSTPTITNILFGDKINIENENSTVGQHIEEYDNVDGDVDILEEFFKNETIEFTKDKGNHEQVDFMDNDEEDKDIPENTKHIEYDLDKLFCLACKKQFKTAKAFKKHLTHKHKIKLKKRNNYSTKVCSECGKTFGGRANLHRHMKTHKKTQKPVEIFKCEHCPIECSSLASLSMHMKSHTGVYVGKDTGRKYVCTICNAVSTTAGNFKIHQRRHLKSYSHFCKECHKGFYRAADLKKHLESHNGNNPFKCKYCVIECNSLSNLKMHMKTHGEADAAVKQPVGRYVCPTCGARITTLSNFVRHQRIHTKSYTHRCDECGKGFYSLTDANYHMRSHIGLRPFECPQCDRKFTLRNTLNNHLKCHTGERRFNCDYCKKSFIRKATLTKHIKMSKSCFKARMPHDTKFDGEVLSSHETDIENNSQNIDEIGLDPDNEYLDQDEVADDQHLPETAEGLLQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -