Basic Information

Insect: Thyatira batis
Gene Symbol: -
Assembly: GCA_905147785.1
Location: LR990513.1:1424133-1436372[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00014 0.011 16.7 0.7 1 23 334 356 334 356 0.98

2 9 9.1e-07 6.9e-05 23.6 1.9 1 23 401 424 401 424 0.97

3 9 0.018 1.3 10.1 0.0 2 23 430 451 430 451 0.96

4 9 5.2e-06 0.00039 21.2 1.3 1 23 471 493 471 493 0.98

5 9 2.3e-06 0.00017 22.3 1.4 1 23 498 520 498 520 0.98

6 9 2.9e-05 0.0022 18.8 1.4 1 23 529 551 529 551 0.99

7 9 8.3e-07 6.2e-05 23.7 0.9 1 23 557 580 557 580 0.97

8 9 0.0019 0.14 13.1 0.4 1 23 586 609 586 609 0.95

9 9 0.094 7 7.8 3.0 1 23 617 640 617 640 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00014	0.011	16.7	0.7	1	23	334	356	334	356	0.98
2	9	9.1e-07	6.9e-05	23.6	1.9	1	23	401	424	401	424	0.97
3	9	0.018	1.3	10.1	0.0	2	23	430	451	430	451	0.96
4	9	5.2e-06	0.00039	21.2	1.3	1	23	471	493	471	493	0.98
5	9	2.3e-06	0.00017	22.3	1.4	1	23	498	520	498	520	0.98
6	9	2.9e-05	0.0022	18.8	1.4	1	23	529	551	529	551	0.99
7	9	8.3e-07	6.2e-05	23.7	0.9	1	23	557	580	557	580	0.97
8	9	0.0019	0.14	13.1	0.4	1	23	586	609	586	609	0.95
9	9	0.094	7	7.8	3.0	1	23	617	640	617	640	0.96

Sequence Information

Coding Sequence: ATGTTGCATAATACTGGGTCTTACGGGCCGAACGACGATCCAATAAACATGGGCGCGTCTCGAAACATAGCTCCAATGTCGGGGCAAAGCTTAACACATAGTTTGAGTAATATGAGCAAAATGGGGCAGCAGGCGTCTCACCCACCTAGTGGACACTACATGTTGCCTAATTACCCTAATTACAACCAGCCTCCGTCAAACATTGGTGCACAAGTGAATACTTTTCAGACCTATCAACCTATTGGTTACCAGCAGAGTTTCATGAACCAGAATCCGCATCAAGATGCATGGCATAACAGTATGTTGCCCGTGAATTTGAACGTTCACAACAGTCCTTCTAATGGAGCTATCAATATGCTGTCAGGATGTGCCATGAATGACATGAAAAATACGGTAATCCAGAAAACTGTACCATTAAACATACCGCACGTACAAAGAAAGAGTTTCCAAAGTGATATTACCAATTATAATGATTATTCATATAATGCTAATGACAGACACAACAATTTTGCAACCAGACCACAGGAAAAGTCAATTATAGATAATGATAGGCGACGAAGTCTAGAAAACACAGTAAAACTTATTGAAAATATATTAATTAATTCTACGCCAAAAAAACCAGCAGAAGTTATACAAGAAATAGAATCTGATCCTTTATTACTATCACCGAAGATTGAAACGGGACCAGTTAACGACTCAAACGAAATTGACAATACGGACACTGAAAATGAGTCTTCCGAGCCAGAGGACGTAAAACCGATAGAGTTAACGGACAAGTTTGTTTTGGAGGACATGAAAACGGGTATCATGTCTAAAGTGGTCATCAAAGTTGAGGAGACGAGCTGGACTGACGTGGAATTTGTGCAGCCGTTTGACAAGGATATGAACGGGGAGTTACGAGAGAATGTCACGGACTGCGACATAATTGACAGTGAAAACAGTATCAATGAAGCTACGGATATTATTAAGAATGGCATGAAAACCAATCTGAACACTTACTATGAATGCCCATATTGTCCTCTCATATTTAAACATCCGAAGAGACTCCTCATTCATACCAAATGGCACGCAATAAGCTCAGCATGTGACAAGAAAGCCGAACAAGCGAAAGAAAAAGAGGTAAAACGTTTGCAGAAGCGAGAGGCAAAGGTCTTGGAGAGGTTGAACGCTAAAGAGGAGAAGAAAGACCCAAATGAAAAGTTTCCATGCAAGGATTGCGATAAAGTTTTCAATGTTAAGAGCAGCCTGAAGAATCATAGACAGAAATTCCACCCAACACGTCTCCGAGAGTGCAAGGTTTGCGGGAAGCAAGTGTTCGGTTGGATGGCTCTGCGTGCCCACGCGGCCACCCACGCGGGGGAGGCGGGGGCCCCCGGGGCCACCGGCGCGGGTGGCCCGGCCCCCGGGGGCTACCAGTGCAAGGAGTGCCCCAAGCAGTTCAAGTATGCACAGTCGCTAGCGAAACATAGGGATACGCATCTGGAGAAGACACACGAATGTACAGGGTGTCCGAAGAAGTTTGGGTCCCAGGCGTTGCTAAAGATGCACATGAAGACCCACGAGCGGGCGCAACGTGGGGCTACGTACCGCTGCACATACTGCGCTAAAGGGTTCTTCGAGTCCTACAATTTACAGGTACATGAAAGGACCCATCGCAACGAGAGGCCGTTCTCATGTGAAATATGCAACACCAGTTTCGGCACCAACTCGAGCCTCAAGAGACATCTCAAAGTGTCCCACAGTACGTCGAAGCCCTACGCATGCCCGGTGTGCCATCGCTCGTTCGTCTCAGCCTCTATCCGCGAGAGGCACCAGCTGAGGGCCCACGGTGACCCCGAGGACTTCAAGTTCCCCTGCGACCAGTGCCCCTGCAGATATCTCAAACAGAAAGATCTACAAAAACACATATACAAGTCACATCCAACGGGCAAGAGAAGGAAAAAGGTCAAAAGCGATAGCGAATGA
Protein Sequence: MLHNTGSYGPNDDPINMGASRNIAPMSGQSLTHSLSNMSKMGQQASHPPSGHYMLPNYPNYNQPPSNIGAQVNTFQTYQPIGYQQSFMNQNPHQDAWHNSMLPVNLNVHNSPSNGAINMLSGCAMNDMKNTVIQKTVPLNIPHVQRKSFQSDITNYNDYSYNANDRHNNFATRPQEKSIIDNDRRRSLENTVKLIENILINSTPKKPAEVIQEIESDPLLLSPKIETGPVNDSNEIDNTDTENESSEPEDVKPIELTDKFVLEDMKTGIMSKVVIKVEETSWTDVEFVQPFDKDMNGELRENVTDCDIIDSENSINEATDIIKNGMKTNLNTYYECPYCPLIFKHPKRLLIHTKWHAISSACDKKAEQAKEKEVKRLQKREAKVLERLNAKEEKKDPNEKFPCKDCDKVFNVKSSLKNHRQKFHPTRLRECKVCGKQVFGWMALRAHAATHAGEAGAPGATGAGGPAPGGYQCKECPKQFKYAQSLAKHRDTHLEKTHECTGCPKKFGSQALLKMHMKTHERAQRGATYRCTYCAKGFFESYNLQVHERTHRNERPFSCEICNTSFGTNSSLKRHLKVSHSTSKPYACPVCHRSFVSASIRERHQLRAHGDPEDFKFPCDQCPCRYLKQKDLQKHIYKSHPTGKRRKKVKSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -