Basic Information

Insect: Thyatira batis
Gene Symbol: -
Assembly: GCA_905147785.1
Location: LR990496.1:9081679-9091192[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.25 19 6.5 2.3 1 23 17 39 17 39 0.97

2 14 0.31 24 6.1 0.5 1 23 68 90 68 90 0.96

3 14 0.0024 0.18 12.8 0.2 1 23 115 137 115 137 0.94

4 14 0.22 16 6.6 0.1 5 23 145 164 142 164 0.94

5 14 0.0081 0.61 11.1 1.4 1 23 238 260 238 260 0.98

6 14 1.6e-06 0.00012 22.8 0.4 1 23 266 288 266 288 0.98

7 14 0.073 5.5 8.1 2.0 1 23 294 316 294 316 0.97

8 14 2.7e-06 0.00021 22.0 1.5 1 23 322 344 322 344 0.99

9 14 1.2e-07 9.3e-06 26.3 0.6 1 23 350 372 350 372 0.98

10 14 0.064 4.8 8.3 5.4 2 20 379 397 378 400 0.86

11 14 0.00022 0.017 16.0 0.6 1 23 406 429 406 429 0.93

12 14 2.1e-06 0.00016 22.4 1.5 1 23 435 458 435 458 0.97

13 14 1.9e-05 0.0014 19.4 0.2 3 23 467 488 465 488 0.93

14 14 0.14 11 7.2 0.7 1 13 495 507 495 509 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.25	19	6.5	2.3	1	23	17	39	17	39	0.97
2	14	0.31	24	6.1	0.5	1	23	68	90	68	90	0.96
3	14	0.0024	0.18	12.8	0.2	1	23	115	137	115	137	0.94
4	14	0.22	16	6.6	0.1	5	23	145	164	142	164	0.94
5	14	0.0081	0.61	11.1	1.4	1	23	238	260	238	260	0.98
6	14	1.6e-06	0.00012	22.8	0.4	1	23	266	288	266	288	0.98
7	14	0.073	5.5	8.1	2.0	1	23	294	316	294	316	0.97
8	14	2.7e-06	0.00021	22.0	1.5	1	23	322	344	322	344	0.99
9	14	1.2e-07	9.3e-06	26.3	0.6	1	23	350	372	350	372	0.98
10	14	0.064	4.8	8.3	5.4	2	20	379	397	378	400	0.86
11	14	0.00022	0.017	16.0	0.6	1	23	406	429	406	429	0.93
12	14	2.1e-06	0.00016	22.4	1.5	1	23	435	458	435	458	0.97
13	14	1.9e-05	0.0014	19.4	0.2	3	23	467	488	465	488	0.93
14	14	0.14	11	7.2	0.7	1	13	495	507	495	509	0.89

Sequence Information

Coding Sequence: ATGAAACTGAGTACAGATGTTATTGTTAAACTGGAAAAAATCAACATTCACAAATGTGATGTGTGTTCTAATGTATACTTGTCTCACAATGAGTTGGAGAAGCACCTTGCCCGACATGATCCAGACAATATTGATATAACAAATGAAGAAGTATTAAAACATATAAAAAGTGCTCATGTACTGCTGGATAGAAGGCGAGCCTTTAGCTGTGAGGTATGTCAAGATGGCTTCCCCACATTCAGTGAATATAGTCTACACAAATTACAACATATACAACAAGATGTAATTAAATCAAGAGTCACCAAAAAGGATCATAATGCAAATAGCAAATTTATAAAGACTTTTAAATGCACAAAATGTGAACTCAGTTTTGTTGCTGCGAGCACACTGTCAGCACATTCCGTTGTACATGACCCTTACCCTAATATATGTGAATGCGGCATTGGCTTCTATGCTAAAGCAGATTTGAAGAGCCACAAAAAGTTAGTGCACCCTGTTTGTTACAAAACAGAGGATGAAAATGATACAATAAAGGAAGAAAATGAACCTCAACATAAGAGTAACCGAAAAACAGACAAATTAAAGAAAGATAGAAATAAAGGAGGCATAAAACCAAAGAATAAAGCTAGACCTTTAAATGAAATAAAGAAAAAACCTGTTGTTAAAAAAGATGAGAACCAAATGCCTATAGAGATGGATGAAAACAACAAATATGTGTGTCCAATTTGTAAAAAACTGTTTAAATGTAAAATAAATACGATTGTACATTTGCGTGTCCACACTGGTGAGAGACCTTTCGAGTGTGACCTGTGTGAAAAACGATTCAGTCAGAGTGGTGCGCTGAAACTCCATATGGAGCGTCACACTGGAATAAGAAGATTCAATTGCCAGTACTGTGCAAAAAAGTTCCATGCCTACAGCGATGTGGTACTCCATGAACGCACTCACACTAAAGAAAAGCCATTCAAGTGTACATATTGCATAAAAGCCTTCAGTGATCCATCTGCGTTCAATCGCCACACGCGCACACACACCGGCTACAAACCCTACCAGTGCCCCTACTGTCCCAAGAAGTTCAGCGACGCCAGCGGCTTAACGAGTCACAAAATGCGTCATGAAAATAAAAAACAAATTCAGTGCAAAGTTTGTAAAAAAAAGTTTTACAACAAACACTCTTTGAGGTGTCATTCAGTCGTACATACTAAAACGAAAAACTTCGAATGTCAGGATTGTAGCAAAACATTCGCGCTGAAACAATATTTAACTGTGCATAGAGACTTGGTCCACATCGGCACTCGGCGATTCGAATGTGACTACTGCCAAAAAATGTTCAAATCCAAGGCATATTTAAAAAGCCACTACGCCACAGTGCACGAGGCGGAAAAAATCGAAGTCATTTGCAACGAATGCGGCAAAAAGTTTAAAAATAAATTGACTTTAATTACACATATAGCAAATATACATAGTGGTACTGAAAAAGAGTTCGAATGCGATCACTGTGGTACGTTGTTTCGTTCAAAACAATCGGATGTCGATGAAGCGATGCGGCGACGCGTCGCGCCGGCCGCGCCGCTCAATACGCGCGGCGCGCGCGTACCGTGCGGCACCGGCTGA
Protein Sequence: MKLSTDVIVKLEKINIHKCDVCSNVYLSHNELEKHLARHDPDNIDITNEEVLKHIKSAHVLLDRRRAFSCEVCQDGFPTFSEYSLHKLQHIQQDVIKSRVTKKDHNANSKFIKTFKCTKCELSFVAASTLSAHSVVHDPYPNICECGIGFYAKADLKSHKKLVHPVCYKTEDENDTIKEENEPQHKSNRKTDKLKKDRNKGGIKPKNKARPLNEIKKKPVVKKDENQMPIEMDENNKYVCPICKKLFKCKINTIVHLRVHTGERPFECDLCEKRFSQSGALKLHMERHTGIRRFNCQYCAKKFHAYSDVVLHERTHTKEKPFKCTYCIKAFSDPSAFNRHTRTHTGYKPYQCPYCPKKFSDASGLTSHKMRHENKKQIQCKVCKKKFYNKHSLRCHSVVHTKTKNFECQDCSKTFALKQYLTVHRDLVHIGTRRFECDYCQKMFKSKAYLKSHYATVHEAEKIEVICNECGKKFKNKLTLITHIANIHSGTEKEFECDHCGTLFRSKQSDVDEAMRRRVAPAAPLNTRGARVPCGTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -