Tbat003147.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990498.1:4611039-4620159[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0014 0.1 13.5 0.2 2 23 133 154 132 154 0.93 2 17 0.002 0.15 13.0 2.4 1 23 160 182 160 182 0.96 3 17 0.00023 0.017 16.0 0.3 1 23 283 305 283 305 0.98 4 17 0.0021 0.16 13.0 0.0 3 23 390 411 388 411 0.90 5 17 0.0097 0.73 10.9 0.2 1 23 426 448 426 448 0.96 6 17 0.0097 0.73 10.9 0.2 1 23 495 517 495 517 0.96 7 17 0.0097 0.73 10.9 0.2 1 23 646 668 646 668 0.96 8 17 0.0097 0.73 10.9 0.2 1 23 797 819 797 819 0.96 9 17 0.0097 0.73 10.9 0.2 1 23 948 970 948 970 0.96 10 17 0.0097 0.73 10.9 0.2 1 23 1099 1121 1099 1121 0.96 11 17 0.0097 0.73 10.9 0.2 1 23 1250 1272 1250 1272 0.96 12 17 0.0097 0.73 10.9 0.2 1 23 1401 1423 1401 1423 0.96 13 17 0.0097 0.73 10.9 0.2 1 23 1552 1574 1552 1574 0.96 14 17 0.0097 0.73 10.9 0.2 1 23 1703 1725 1703 1725 0.96 15 17 0.0097 0.73 10.9 0.2 1 23 1854 1876 1854 1876 0.96 16 17 0.0097 0.73 10.9 0.2 1 23 2005 2027 2005 2027 0.96 17 17 0.0097 0.73 10.9 0.2 1 23 2156 2178 2156 2178 0.96
Sequence Information
- Coding Sequence
- ATGGATCCCGGTGGAGAGGAGTTCAGCCTCCATTGGGAGGAGGAAGTTATTGTAAAGCCTAGTCCTAGAAGATCATCTGAAGAAGAAATATGTGGCCTTGAAAATACCTCTGAAGAAATTATACCAGATACTGATCAAATGGCCGCAGAGAACCTTATGTTCTTGGCACAAGATGTGGTCAGCTACACAGAGACTGCAGAGCTGGCTGATGACCCAAATGTTGAATGTGTTACTGAGGAAGTTATCACTGACGATTGGGTCTTAACAGGAGGACAAGAACGTGTGGAAGTTCCTTTAGATCATTTAACTCATCCAGTGTTAGTTGTAAAAGAGGAAAATGACATTGATGTGCCTTTGCCAACAGACCAAGATGAGTACACAGCGATGCGACCGTGGCCTTGCGACTTCTGCTCGCGGCGGTTCCGCAAGAAGGCCGCGCTCATGAACCACATGGTGGCGCACCAGAACGACCGGCCGCACGCGTGCAACCTGTGCGGCGTGCGGTACGTGCGCAAGTGCGATCTCATGAACCACTTGAAAGTGCACGCCTTTGTACCGGATAATCAAGATGCAGTTGATTTTGAAGAAATGTTAGACAACAACCAAATTACAAAACCAAAGAAGAAGAGAGGGAGGCGGAAAAAGAACCCAGAGCCCGTCGAGAACGGGTTGTGGGAGAACATGACGTCGGCTCGCACGCAGCAGTGGTCCCGGCGCGCGAGGTCCCCGGCGGCGCCCGCGCCCGCCCCGGCCGCGCCGTCCCCGCCCTCGCCGCGCTCGCCGTCCCCGCCCGCGGCCGTCCCCGCGCCGGCCCCGGCCCCGGCCCCGGCCGACCCCTCGCGCCCCTTCGTGTGCCGCCACTGCGGCGTCGGCTTCGCGAGGGAGAAGGCGCTACAGTCGCACGCAAGAGTTCACGGCGGCGACTCGCCCATGGAGTGCGCGGAGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGGCCGGCCACGCGCGCCAGCGGCACCCGCACCTGCCGCACCTCGCCGCCAGGGAGGCGCACGTCGACGCCGCCTTTAACAACGACTCCGACTCGGATGACGACATGGATTTCCGGCTGTCACCCGTGTCGGCGGCCACGGCGGCGGGCGGCGAGCGCGTGTTCGACTCCATGCGCGGCCCCGAGCTGTTCTGCCAGGACTGCGGCGTGGCCTTCCAGCGGGCCGACCTGCTGCGACGACACGTAGCCGCTGCGCACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCGACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTTTGTACAGCTACAAGCGTCACGACAGCACGAGCAGCGCGTGGGGCGAGCACACGTGCGAGGTGTGCGGCGAGACCTGCCCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGCCACGCCGACCGCGTGCGCCCGCTCGCCAACACCAGGTACACACGCCACACACACTCACACGCCCACACTCACACGCCCACACTCACATGCCCACACTTACACGCACAGTGCACTCTACTTGGATGCTGATAAGCAATAA
- Protein Sequence
- MDPGGEEFSLHWEEEVIVKPSPRRSSEEEICGLENTSEEIIPDTDQMAAENLMFLAQDVVSYTETAELADDPNVECVTEEVITDDWVLTGGQERVEVPLDHLTHPVLVVKEENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNQDAVDFEEMLDNNQITKPKKKRGRRKKNPEPVENGLWENMTSARTQQWSRRARSPAAPAPAPAAPSPPSPRSPSPPAAVPAPAPAPAPADPSRPFVCRHCGVGFAREKALQSHARVHGGDSPMECAECGELCWSREALAGHARQRHPHLPHLAAREAHVDAAFNNDSDSDDDMDFRLSPVSAATAAGGERVFDSMRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLADTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGLYSYKRHDSTSSAWGEHTCEVCGETCPDALQLLAHAERHADRVRPLANTRFVQLQASRQHEQRVGRAHVRGVRRDLPRRAAAAGARRAPRRPRAPARQHQVCTATSVTTARAARGASTRARCAARPAPTRCSCWRTPSATPTACARSPTPGTHATHTHTPTLTRPHSHAHTYTHSALYLDADKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -