Basic Information

Insect: Thyatira batis
Gene Symbol: -
Assembly: GCA_905147785.1
Location: LR990514.1:1204994-1209560[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.043 3.3 8.8 0.9 1 23 31 54 31 54 0.91

2 23 0.00029 0.022 15.7 0.2 2 23 79 101 78 101 0.92

3 23 1.6 1.2e+02 3.9 3.3 2 23 124 145 123 145 0.95

4 23 0.0042 0.31 12.0 0.1 1 23 149 171 149 171 0.97

5 23 0.61 46 5.2 1.9 2 23 207 229 207 229 0.97

6 23 4.9e-05 0.0037 18.1 1.5 1 23 236 259 236 259 0.98

7 23 0.00012 0.0089 16.9 2.4 1 23 265 287 265 287 0.98

8 23 6.7e-05 0.005 17.7 1.5 1 23 293 315 293 315 0.99

9 23 4.2e-05 0.0032 18.3 1.9 1 23 321 344 321 344 0.98

10 23 0.016 1.2 10.2 5.6 1 23 413 436 413 436 0.91

11 23 0.0049 0.37 11.8 0.1 2 23 463 485 462 485 0.94

12 23 0.01 0.77 10.8 1.8 2 23 508 529 507 529 0.97

13 23 0.0031 0.23 12.4 0.0 1 23 533 555 533 555 0.98

14 23 0.017 1.3 10.1 0.7 1 23 677 700 677 700 0.93

15 23 2.7 2e+02 3.2 0.1 3 23 728 749 726 749 0.89

16 23 2.6 2e+02 3.2 0.5 9 23 779 793 772 793 0.87

17 23 0.7 53 5.0 0.0 1 21 797 817 797 819 0.80

18 23 0.0044 0.33 12.0 2.9 1 23 824 847 824 847 0.97

19 23 0.03 2.3 9.3 1.0 2 23 855 877 854 877 0.95

20 23 0.0001 0.0077 17.1 0.6 2 23 885 907 884 907 0.96

21 23 0.028 2.1 9.4 2.6 1 23 913 935 913 935 0.97

22 23 7.3e-05 0.0054 17.6 1.6 1 23 941 963 941 963 0.99

23 23 0.0069 0.52 11.4 5.4 1 23 969 992 969 992 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.043	3.3	8.8	0.9	1	23	31	54	31	54	0.91
2	23	0.00029	0.022	15.7	0.2	2	23	79	101	78	101	0.92
3	23	1.6	1.2e+02	3.9	3.3	2	23	124	145	123	145	0.95
4	23	0.0042	0.31	12.0	0.1	1	23	149	171	149	171	0.97
5	23	0.61	46	5.2	1.9	2	23	207	229	207	229	0.97
6	23	4.9e-05	0.0037	18.1	1.5	1	23	236	259	236	259	0.98
7	23	0.00012	0.0089	16.9	2.4	1	23	265	287	265	287	0.98
8	23	6.7e-05	0.005	17.7	1.5	1	23	293	315	293	315	0.99
9	23	4.2e-05	0.0032	18.3	1.9	1	23	321	344	321	344	0.98
10	23	0.016	1.2	10.2	5.6	1	23	413	436	413	436	0.91
11	23	0.0049	0.37	11.8	0.1	2	23	463	485	462	485	0.94
12	23	0.01	0.77	10.8	1.8	2	23	508	529	507	529	0.97
13	23	0.0031	0.23	12.4	0.0	1	23	533	555	533	555	0.98
14	23	0.017	1.3	10.1	0.7	1	23	677	700	677	700	0.93
15	23	2.7	2e+02	3.2	0.1	3	23	728	749	726	749	0.89
16	23	2.6	2e+02	3.2	0.5	9	23	779	793	772	793	0.87
17	23	0.7	53	5.0	0.0	1	21	797	817	797	819	0.80
18	23	0.0044	0.33	12.0	2.9	1	23	824	847	824	847	0.97
19	23	0.03	2.3	9.3	1.0	2	23	855	877	854	877	0.95
20	23	0.0001	0.0077	17.1	0.6	2	23	885	907	884	907	0.96
21	23	0.028	2.1	9.4	2.6	1	23	913	935	913	935	0.97
22	23	7.3e-05	0.0054	17.6	1.6	1	23	941	963	941	963	0.99
23	23	0.0069	0.52	11.4	5.4	1	23	969	992	969	992	0.97

Sequence Information

Coding Sequence: ATGTACGAAGCGGATAAACATCGTAGAAATTTACGGAACATTCTAGAGTGCTCGAACGCGACCCTAATCAAGTGTTACGAGAATAGGGGGTATGCTTGCTGTTTCTGCTCCGAACGGTTCCCAGGTCCAGTGGAGCTCAAGCGACACAATAAAGACGAGCACAGCGAGAAAATGAAAATCATTCATAAAAAAGATTGGTATACGTACAATGTCAAACTTGACATCACATCGCTACAATGCTCCATATGTGAAACCAGCTTCGACACATTGGATGAGCTGACTCAGCATCTGACTGAGCTACACGCTAAACACTTCTACACGGACATCAAGCAATACATTATCCCCTTCAAGCTTGACAATGGTAATTTGAGCTGTTTTATTTGTTTAACTATATGCCACTCGTTCCGTGGCCTCCAGAATCACATGAACGTTCACTACAGAAATTTTATATGCGACATTTGTGAGAATGGTTACATAAATCGTGTTAATTTAGTCAATCATCTAAAGGAGCACCAAATCGGGAAATACAAATGTGACTTTTGCTCGAACGTATACGACACTATCAAGAAGAAACATACACATGAACAATCAATCCACTTACGGTCCAAGTTGACCCGTAAATGTTATTATTGTGTTGATAAATTTTCACATCCCTACACGAGGGACCGTCATATGGAGACAGTGCACGGCGTAGTACTGCCAACCTACAAATGTCAGTCTTGCGATAAATCTTATGTAAACCCAAAGACGTTGAGTTTGCATATAAAAAGATATCACCTTATGCAGAAGAAACACAGATGCACGCAGTGTGAAATGAAGTTTTATCTTCCTAGTGGTCTCCGAAGACATATGCTGACACACACGGGGGAACGTAAATTCAAATGCGAAGTGTGCCTGAAGTTGTTTCCCAGGAAGTGCGCTTTGACTGTCCATATGCGAATACATGAGAACGATAGACCATTCAAATGCGAGTACTGTGATCTGGCATTCTTTCAGAAAAGTTCCATGCAGAGTCACGTGCGTTCCAAGCACAGTGACCAACGTAAACCAGCTAAGTCAAACCGCAAAGGAATCTCAGAACAAGGAAATATGACTATGTCACTGACAAATGCAAATGATGGCAGTCAGACGCTGTTGGTGAAGGATTTAAGCGAGTTGGATAAACATCGTTTTAATATACGTATTATAATGCAGTTTTCGAATGCAACACCGCTGGCCCATCGCGGCAGTATCGGATATTCGTGCTGTTTCTGCAACGAGCATTTTACACACGCGGCGGACCTTAAGCGACACAATATAAACGAGCACGATGATAAAACAAAACTTGACTTCATGCAAAGAAAACCTTTGGACTCTTTTCTCGTTTATCTAGACATCACATCGTTGGAATGCACCATATGCGACACCAGCGTAGACTCGTTGGAACAGCTTACCGATCATCTCGATAAAGTCCACAATATAGAATTATATACCGAGTTAAATAATCACATATTCTCGTTCAAATTTGACGATGATGTGATGCGATGTGTGTTCTGTGAACAAGTTTACAGTAAATTCAAGCATTTGTTGGATCATATGAACGTGCATTACAGAAACTATATTTGCGACTTATGTGACGCTGGGTTCGCCAACAAAAGTATTCTAAATAGTCATATATTGGTCCACAGGACTGACACGCCCCAACTTGAAGACTGTATCGTAATATCTGATCCGATACCTAAGCAACAGGGTCGACGATCTAAAGGAGATAAATTATATAAATGTTGTTACTGTAAACGGAAATTTAAAGATTATACACACAAAGAAGGTGTCCAACGTAAGGCAATCGTCGTTAAGACTGGCAACAAAGGTAATACCAAACCGCCGAACAGGATTCTAGTGTACGGTAATACGACTATATTAAAGAGAAACGCTCGTCGACGTATACAACTGAGACAAATAAGCGAGTTGGATAAACATCGCTTCAACATACGGGTTATACTGCAGTGTTCGAATGCAACCCCCATACGTTGTCACGGCGGTATCGGTTACGCGTGCTGTTTCTGCGCTGAGCAGTTCCCAGACCCTACTGACCTCAAGAAACATACTATAAATGAGCACGACGACAAAACTAAACTCAAATTCATGCATGGCAGAATGATGTTTGACTATCTAGTCAAACTTGACATCACATCCTTGCATTGCATCATCTGTAACACCTCCGTAGACACGTTAGAGCTACTGATCGAACATCTCATAAACGTTCACGAGAAATTATTCTACACTGACATTAAGAATCATATCATATCATTTAAATTCGAAGACGAAGTGCTGCGTTGTATCTTCTGCATGAACGTGTTCAACAAATTCAAAGCTCTACAAGAACATATGAACATTCATTACAGGAATTATGTATGCGACGTTTGTGACGCCGGTTTTGTTAACCGCAACATTCTGTCTGGTCACACAGAGGCACATAAAATTGGCACATTCAAATGCGAACACTGTCCAAAGGTATTCGACACTATACGCAAGAAGAAATCCCACGAGAGATCTGTGCACGACCACTCGAAATTGTTAAACAAATGTGGTTACTGCGAGCAGAAGTTCAGGGATTATAGACAGAAGAACGTACATTTGGCGAAAGAACACGGGGTTCAATTGAACGCGTTAAAATGTCAGGCGTGTGACAAAACGTTTCCGAGTAAAACAGCTCTGACGGTGCACACGAAAAGGGACCACTTGATGGAGAGAAGACACAAGTGCACATTATGTGACATGAGATTCTTCGCAACGAACGAGTTGAAAATGCACATGGTGAAACACTCGGGGGTGCGAGAGTTTAAATGCGACGTGTGCATGAAGTCTTATGGACGGAAGAAAACGTTGAGGGAGCACATGAGGATACACGAAAACGACAGACGGTTCAAATGTGAACACTGTGTGCAGACGTTTGTACAGAAATGCAGTTGGAGAGGCCACATGAGAAATAGACACGGGGCTATTGTATAA
Protein Sequence: MYEADKHRRNLRNILECSNATLIKCYENRGYACCFCSERFPGPVELKRHNKDEHSEKMKIIHKKDWYTYNVKLDITSLQCSICETSFDTLDELTQHLTELHAKHFYTDIKQYIIPFKLDNGNLSCFICLTICHSFRGLQNHMNVHYRNFICDICENGYINRVNLVNHLKEHQIGKYKCDFCSNVYDTIKKKHTHEQSIHLRSKLTRKCYYCVDKFSHPYTRDRHMETVHGVVLPTYKCQSCDKSYVNPKTLSLHIKRYHLMQKKHRCTQCEMKFYLPSGLRRHMLTHTGERKFKCEVCLKLFPRKCALTVHMRIHENDRPFKCEYCDLAFFQKSSMQSHVRSKHSDQRKPAKSNRKGISEQGNMTMSLTNANDGSQTLLVKDLSELDKHRFNIRIIMQFSNATPLAHRGSIGYSCCFCNEHFTHAADLKRHNINEHDDKTKLDFMQRKPLDSFLVYLDITSLECTICDTSVDSLEQLTDHLDKVHNIELYTELNNHIFSFKFDDDVMRCVFCEQVYSKFKHLLDHMNVHYRNYICDLCDAGFANKSILNSHILVHRTDTPQLEDCIVISDPIPKQQGRRSKGDKLYKCCYCKRKFKDYTHKEGVQRKAIVVKTGNKGNTKPPNRILVYGNTTILKRNARRRIQLRQISELDKHRFNIRVILQCSNATPIRCHGGIGYACCFCAEQFPDPTDLKKHTINEHDDKTKLKFMHGRMMFDYLVKLDITSLHCIICNTSVDTLELLIEHLINVHEKLFYTDIKNHIISFKFEDEVLRCIFCMNVFNKFKALQEHMNIHYRNYVCDVCDAGFVNRNILSGHTEAHKIGTFKCEHCPKVFDTIRKKKSHERSVHDHSKLLNKCGYCEQKFRDYRQKNVHLAKEHGVQLNALKCQACDKTFPSKTALTVHTKRDHLMERRHKCTLCDMRFFATNELKMHMVKHSGVREFKCDVCMKSYGRKKTLREHMRIHENDRRFKCEHCVQTFVQKCSWRGHMRNRHGAIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -