Tbat022590.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990488.1:2523428-2531313[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 2.4e-06 0.00018 22.3 2.1 1 23 196 218 196 218 0.98 2 29 0.0081 0.6 11.1 0.5 2 19 251 268 250 271 0.94 3 29 0.00018 0.013 16.4 2.3 3 23 301 322 299 322 0.96 4 29 2.7 2e+02 3.2 0.2 2 12 344 354 343 356 0.85 5 29 0.0014 0.1 13.6 1.2 1 23 374 397 374 397 0.97 6 29 0.015 1.1 10.3 0.2 1 23 417 439 417 439 0.96 7 29 1.8e-05 0.0013 19.5 1.0 2 23 480 502 479 502 0.96 8 29 0.00038 0.029 15.3 2.3 2 23 541 563 541 563 0.97 9 29 1.7e-05 0.0013 19.5 0.6 1 23 613 636 613 636 0.97 10 29 0.0083 0.62 11.1 0.2 1 23 695 717 695 717 0.97 11 29 0.0046 0.35 11.9 5.9 2 23 729 750 728 750 0.97 12 29 0.07 5.2 8.2 1.5 2 23 762 783 761 783 0.96 13 29 0.0015 0.11 13.5 1.0 1 23 793 815 793 815 0.98 14 29 0.0052 0.39 11.7 8.5 1 23 844 866 844 866 0.96 15 29 0.0004 0.03 15.2 2.6 1 23 877 899 877 899 0.98 16 29 0.00069 0.052 14.5 1.1 1 23 907 929 907 929 0.97 17 29 0.0003 0.022 15.6 0.3 2 23 949 971 948 971 0.97 18 29 1 76 4.5 3.1 1 23 1018 1040 1018 1040 0.94 19 29 0.0028 0.21 12.6 1.9 2 23 1051 1073 1050 1073 0.95 20 29 0.00079 0.059 14.3 0.3 2 23 1096 1117 1095 1117 0.95 21 29 8.9 6.7e+02 1.6 0.3 2 20 1121 1139 1120 1140 0.84 22 29 10 7.5e+02 1.4 6.6 2 23 1160 1182 1159 1182 0.96 23 29 0.00087 0.065 14.2 0.3 3 23 1199 1219 1197 1219 0.94 24 29 0.017 1.3 10.1 2.7 3 23 1227 1247 1225 1247 0.96 25 29 0.033 2.5 9.2 1.0 2 23 1258 1280 1257 1280 0.95 26 29 0.37 27 5.9 2.7 2 23 1297 1315 1297 1315 0.89 27 29 0.18 13 6.9 0.5 2 23 1386 1407 1385 1407 0.93 28 29 0.0029 0.22 12.5 0.4 2 23 1418 1440 1417 1440 0.95 29 29 2 1.5e+02 3.6 3.1 2 20 1478 1496 1477 1498 0.92
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTCGGAAAGTGCAGGCTCTGCCTCAAGCTTGGCGACTTCTATTCTATATTCACGGTGGACAATGCCGTCCAGCTCGCTGAGATGGTCATGGATTGTGCCCGAGTCAAAGTATATGAAGGAGATGGGCTCCCTGATAAAGTTTGCTCAGAATGTGTACAAAAGCTTAGCAGCGCATACATCTTTAAGCAGCAGTGCGAGAGAGCTGATCAGGAGCTCCGGCGAAATTATGTACCACCACCAGGATTCAGTGTCAGCCCCCCGCCGCCGAACAGGCAAAGTAGCGATTCAGCCTTCTCAACCCATACAGACAGTTCCAAACCGTCATCCTCCACTGAATCCAAGGTCACACCGGCCAGGAGTCGCAAGCGTAGTATAGAGAGCGTCGACAACGCCTCCGTCGAGAGCCGCTCGCAAGAATACCGACTGAGCAGTTCCAAACGGGTCGAAGAACTTCGAAGGTCCCAGAAGCGACCACGATCCATGTCAGGAAACACCTCCTCTGACTATGAGGACAATAACAGCCAGTCCTTCATGGCCGATACGGATTCCGACGAACCACTTGTCAAGAACACCCACAAATGTAAAGTCTGCCCCAAGTCTTTTAAATCCGTCAAAAGCCTAAGTGCACATATGCGCGTGCATTCGTTTGCCAAGAGGGAAAGTTTTCCCGATAATATTTTGGTTAACATACCAATCAGAAACGAAGAAGAGGATGCGACAGATGTAGAAGACAAATTGAGCTGTCAGAAATGTAGTAAAACTTTCAAGCTGAAGATAATGTTGAAACGGCACAGCGACATATGCGGGAAGGAGATTAAGAAGTCCCCGCAAAAGGAGTTGCTCGTGTCACTCGAACCGATCGACGGCGTGCAGTTTAAGAAGCTTGACTGCCAGATGTGTACGACCAAGTTTAAAACTGTGGCCAATCTGGAGAAGCACATGAGAATATGTCACTCTGCAGTATTGAAAAAGGAACCGCCTGCTGAATCGAAGATCGAAAGGGGCCAAGTTAACATACCCTGCCTCTACTGCGGGCAGTCCTTCGACGACTATTACATTCACTGCGCACACTTTGGCGCATGTTCTAAAAGGGATGACACCATACCGTACAAATGTCCGATCTGTGAGAAGGTTATGTCGCGAAGGAATTCTTACTTTAACCACTTGAAGAACTTGCACTTTGAGCCTCGTGCGTCCCACAGTAAGTATGAGAATGAGGAGAAGAAGCAGGAATTCTTTGAATGCCGAATGTGTAACAAGAAGTTGCCGAGCCAGGACCGGCTGATCACGCATTTGGCGGCACATGTGTCCAATATAGAGGAGCCTGATGTTGCAGTTGATGATGAATCTAGAGCGAGCACAGTAGATGATTCGGCATCAGTAACATCAATGTACAGTAACTCTCATGTCCCCACTGGCCCACTCAAGTGCGACATATGCGACAAGCAATTTAAATATAAGAGAGCTCTTGAGACACATCAGCAAAGGGTCCACAACACGGCTGTAGAAATAAAAATAGAACCACCAGACAAAGCTTCAACGAGCCTGCTCAGTGAAACATACAGACCGTCTGAGTCTGAATCTAGTCAAGAAGAAGGCGATGATAACACATGTGATATTTGCGAGAAACAGTTCTCGTACAAAAGGCTGCTCCTACAACATAAGCGCACTAAACACAACATGTCTTCAGGAACGAAGCGTGCGAAAATCAACCTTAAAGATTGCTCGGTAAAGTGTCTCATCTGCGATATGGACATGAAAGTGAGCGCTATCAATGAGCACAATCAGAAACACATCTCTGTTAACATGAAGCCGAGGAATGTGTACACTTGCGCAGAATGCGGGGAGAAGTTCAAGAGTTGTAGTGCCCTAGCCAATCACATAAAGCTGATACACAGGTTGAAACAGCAGCAGATGCAGAAACAACAGTTTGAAGGTGATTTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCGCTGGACTGGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCCGGAAACAATGATAAGGAGGGCAAACCATTAGTGAACTTGTCAGGGTTCACCTGCCCAATATGCAGTAAGCAGATGCCCACCTTAATATCATTGAAGAGACATGTGAACTGGCATTCAAATGTCGGCAATAACATTCAGAAGATTACGGAGTGCTTTGTGTGCAAAGAGACATTCCGTTTCCAGTGTCACTACAAGATCCACATGCGGGTACATTACAATGACCCCAACTTAGACCCTAAACTGCTCACCTGCTCGATCTGCAACCGCAAGAGCAAGCACCTCCGCGCCGCCATGGCCCATATGAACTACCACAAACAAACTCGCTTCAGCAGTAAAGATTACCAATGTTCTATTTGCAAGAAGGTCTTCCAATATAGAAAAGTCTATCTCTCCCACATGGCGATACACTACAAGCGAGGCGAAAGCGCTCAGAATACCATAGTAGGGCATGTGCTTCCCAATACGGCCGATAAAACAGTGTTCGATGGCACCCACACCTGCCATCATTGCGGCAAAGTGTGTGACTCCGAAAACTCCCTGAAACACCACATTATATGGCACAACTCCAAGACTTCTTTGTACGGCGCTCGACACGAGTGCCAGATCTGTAAACTGGTCTTCACAAACAAAAGGAGATTAGAAATACACACCAGAAGCCATTACGAAGACGAAAATGGTCCATTCAAATGTCAAATTTGCGGTAAAGGCTACAACGAGGAGAACTATTTCAAGAAACACGTCAAGGGTCATAATTTCGATCATCAGTCGCACAAGAAGAGGATTGATAAACTTCGGAAGGATAAAGTGAAGTGCCCTATTTGTACTCGGTTTTACCCAGACTTGGTGAAACTTATTCGTCATCTGAGACGGACGCATCCCGAGAGCAAGATGATCAAAACCGACCCAGATGCGCCGCCTCCTATCTACTACTCGTGCAAGCTCTGTGCCAGGGAGTTCCTAGACGAGAGAAGACTACAAATGCACGAAGAAGCCCACCTCAGGAAACCAGAGCTGTTCAAGTGTAAATTCTGCGGCAAGAAAGCCATGTCTCTGAAGAATCATCGGATTCACATCAAAGGCCATTTGACGACGAAGCACGTTGATAATCCACTCAAGTGTCCTAATTGTGATGAGAAATTCGTGAAAGGATATGACTTGCACCACCATCTGCGCGATGTCCACGATATCAACGAAACTTGGATTGCTGACGACACCCAAAAGATTCTGAATGGGCCCCTCAAAGAATTGCAATGCTCTATCTGTTTCAAGGTCTTAGCCAGCAAAGGAAATTTCGAGAGACACATTGACTACCATAACTCATTGAGGTGTAACTACTGCTTTGACTACTTCAGCACTTTAAAATTCTTGGAAGGACATTTGGCGTTCACGTGCGAAAAGAAAAAGATTATCGGCGAAACGGAAGTTTTTCCGAAGAGAGTAAAGTGTCATCTGTGCTACAAAGCGTTCCACTTGCAAGTGAAGTTGGACTGTCACATGCGGACGCAACACGGCATTAAAGTTTCCAAAGAAGCCTCTGAAAGCAAGAAGGAGATCATATGCGACTATTGTTTCAAGGTGTTTGAGAATGAATATGCGCTGAGGAACCACAAGATTTACCATCGCAGCGTCGGCTACTACGGCTGTCTTTATTGCAACAGAAAGTTCAATACTCTAACGCTATACAGAAAGCATAAGAATTATCATTTCTCTCAGCTGAATGTGGATGATCCGACTAAATGTGATCATTGTGATGAAAAATTCGTTGCGTTTAGAGAGATGATATACCACATGAGAGATGTCCACGGAGACGATAAGGAGTGGATCGTAGAACCCAAAGAATCCATCGAAGAAACTTGTCCTATATGCAAGAAGGTCTTCTTTAACCTCCACAGGCATCTCGATTATCACGAAGCAAACAAATGCAATAAATGCAACGAGTATTTCTACTCTCAGGTCGATTGTGATAACCATCTTTGCGCCATAGAAAGTGACGACGAAGTCACCGTGAACAAAACCGGAGAATCGAAGTACGAGGAATGCGCCTTCTGTTTCAAGCCGATAACCAAAAAGGACTCAAAACTCAAGCACGATAAAATTCACCGAGGCTCCGGATCGATATCCTGCCGATTCTGTCCGCTCAAATTTAAGACTATGGACGCATTTAACATTCACGCATTCTCCCACCGAAGTAGGAAGTATAATAAGAAACCTATCAAATGTCGCAAATGCGGCGAGAAGTTCGTTAAATACGGACCGTTTATGCGGCACATGAAAGCCGTTCATAAGTCCATGAAGAAGGTGCACTACAGGACGATCGTTAAGGCCGAGACGTGTGTCGTATGCGGCGACGGCTTTCCGAACCTGCACAATCATTACAGAGCTCATCTCCTCAACCAGTGTCAACTGTGCCGCAAATATTTCACCTCCTCAAAAGTATTCTCCAAACACGAGTGTGATAAAGAAGATTACGACCCGTCTAAAGTGTTTAAATGTGATGAAAATCTACTGGTACACATAAATTCTTACGTTCCCAAAGATGAAAAGGATGATGAGAAATTCTACGGTCACACTGATGATGAAGATGATGAACAAGATGTGCCGTTACCTGAACCCCAAGATGAAGAGGGTATTATTGAAAGGAATTTACATATGATGGTTCAGTCTCCTATTATATCGGATGTTCTGTCCCTCTACCAGAAACATGAGGTTTCCAGCCAGAACGGCGATGATATTAGTCAAGATGGTGATGATAATAGCCAAATTGGTGATGACGGCAGCCAAAACGGTGATGAAGTAAAAAGTGTTGTCACCCAAAAGGTTGATGAAAATATCGTCAGTTTAACGGACGACGACTCCATGGACATCACTGATAATATTCCAGTTGTTGTTATTATAGATGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMDCARVKVYEGDGLPDKVCSECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSVSPPPPNRQSSDSAFSTHTDSSKPSSSTESKVTPARSRKRSIESVDNASVESRSQEYRLSSSKRVEELRRSQKRPRSMSGNTSSDYEDNNSQSFMADTDSDEPLVKNTHKCKVCPKSFKSVKSLSAHMRVHSFAKRESFPDNILVNIPIRNEEEDATDVEDKLSCQKCSKTFKLKIMLKRHSDICGKEIKKSPQKELLVSLEPIDGVQFKKLDCQMCTTKFKTVANLEKHMRICHSAVLKKEPPAESKIERGQVNIPCLYCGQSFDDYYIHCAHFGACSKRDDTIPYKCPICEKVMSRRNSYFNHLKNLHFEPRASHSKYENEEKKQEFFECRMCNKKLPSQDRLITHLAAHVSNIEEPDVAVDDESRASTVDDSASVTSMYSNSHVPTGPLKCDICDKQFKYKRALETHQQRVHNTAVEIKIEPPDKASTSLLSETYRPSESESSQEEGDDNTCDICEKQFSYKRLLLQHKRTKHNMSSGTKRAKINLKDCSVKCLICDMDMKVSAINEHNQKHISVNMKPRNVYTCAECGEKFKSCSALANHIKLIHRLKQQQMQKQQFEGDLADFCEVVVTKAEPLDWIQSHNGFGEVPGNNDKEGKPLVNLSGFTCPICSKQMPTLISLKRHVNWHSNVGNNIQKITECFVCKETFRFQCHYKIHMRVHYNDPNLDPKLLTCSICNRKSKHLRAAMAHMNYHKQTRFSSKDYQCSICKKVFQYRKVYLSHMAIHYKRGESAQNTIVGHVLPNTADKTVFDGTHTCHHCGKVCDSENSLKHHIIWHNSKTSLYGARHECQICKLVFTNKRRLEIHTRSHYEDENGPFKCQICGKGYNEENYFKKHVKGHNFDHQSHKKRIDKLRKDKVKCPICTRFYPDLVKLIRHLRRTHPESKMIKTDPDAPPPIYYSCKLCAREFLDERRLQMHEEAHLRKPELFKCKFCGKKAMSLKNHRIHIKGHLTTKHVDNPLKCPNCDEKFVKGYDLHHHLRDVHDINETWIADDTQKILNGPLKELQCSICFKVLASKGNFERHIDYHNSLRCNYCFDYFSTLKFLEGHLAFTCEKKKIIGETEVFPKRVKCHLCYKAFHLQVKLDCHMRTQHGIKVSKEASESKKEIICDYCFKVFENEYALRNHKIYHRSVGYYGCLYCNRKFNTLTLYRKHKNYHFSQLNVDDPTKCDHCDEKFVAFREMIYHMRDVHGDDKEWIVEPKESIEETCPICKKVFFNLHRHLDYHEANKCNKCNEYFYSQVDCDNHLCAIESDDEVTVNKTGESKYEECAFCFKPITKKDSKLKHDKIHRGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGPFMRHMKAVHKSMKKVHYRTIVKAETCVVCGDGFPNLHNHYRAHLLNQCQLCRKYFTSSKVFSKHECDKEDYDPSKVFKCDENLLVHINSYVPKDEKDDEKFYGHTDDEDDEQDVPLPEPQDEEGIIERNLHMMVQSPIISDVLSLYQKHEVSSQNGDDISQDGDDNSQIGDDGSQNGDEVKSVVTQKVDENIVSLTDDDSMDITDNIPVVVIIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01083560;
- 90% Identity
- -
- 80% Identity
- -