Tbat005532.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thyatira batis
Gene Symbol
zfh1
Assembly
GCA_905147785.1
Location
LR990514.1:5229371-5236259[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.5e-05 0.0026 18.6 3.3 2 21 113 132 112 133 0.94
2 25 0.037 2.7 9.1 5.1 1 23 163 185 163 185 0.95
3 25 0.0054 0.41 11.7 2.1 1 23 190 212 190 212 0.96
4 25 0.04 3 8.9 4.8 2 20 216 234 215 236 0.91
5 25 0.00037 0.028 15.3 1.7 1 23 248 271 248 271 0.97
6 25 4.9e-06 0.00037 21.2 0.9 2 23 278 299 277 299 0.97
7 25 0.14 11 7.2 0.5 5 23 309 327 308 327 0.96
8 25 5.5e-06 0.00041 21.1 2.8 2 21 451 470 450 471 0.93
9 25 0.041 3.1 8.9 0.2 3 23 477 497 476 497 0.95
10 25 0.14 10 7.3 0.1 1 23 502 525 502 525 0.95
11 25 0.00039 0.029 15.3 0.1 1 23 530 552 530 552 0.97
12 25 0.00012 0.0091 16.9 0.3 1 23 588 611 588 611 0.93
13 25 1.8e-05 0.0014 19.5 2.9 1 23 617 639 617 639 0.98
14 25 5 3.8e+02 2.3 0.2 5 23 649 667 647 667 0.94
15 25 1.5 1.1e+02 4.0 1.0 1 23 673 696 673 696 0.90
16 25 0.00062 0.046 14.6 0.8 2 21 822 841 821 842 0.93
17 25 5.1 3.8e+02 2.3 0.1 3 23 849 870 847 870 0.93
18 25 0.035 2.6 9.1 0.3 3 23 877 898 876 898 0.98
19 25 4.1e-05 0.0031 18.4 0.9 2 23 904 925 903 925 0.96
20 25 1.4 1e+02 4.1 0.5 3 20 930 947 929 949 0.91
21 25 3.3e-06 0.00025 21.8 0.9 1 23 975 998 975 998 0.95
22 25 0.00043 0.032 15.1 0.5 1 23 1004 1026 1004 1026 0.95
23 25 1.1 86 4.4 0.1 3 23 1034 1054 1032 1054 0.97
24 25 0.0012 0.09 13.7 0.4 1 23 1060 1083 1060 1083 0.94
25 25 3.4e-06 0.00026 21.7 0.3 3 23 1090 1111 1088 1111 0.96

Sequence Information

Coding Sequence
ATGGAGACTTCAAAATTGCTGCCAAACCGTCTATGTAACTATTGCGTTACAAAAGTTTTCGATTTCATACCATTCATGAAATTGTGCAAAGAATCTAATCAGAAATGGAGAAGAGCCGTTGAGAATCTACAATTATCACAAACAACGACAAAGGATGTTCACATAGTGTTAGACAATGATCTCGAAAAGAGGGATGTCCTATATTGTCCAAAAACCAAAGAGAATACCCCTAGTGAAGCTCTCAAGGTCCTAAAACAACGTATCACGAGGAGGAGGCTCTACAAACGAAGAACAGAGAAAGAGAAGCGATTGAAAGCCTTCAAAAATCCCAATTTGAAATGTCCAGAGTGCGATAAACATTTCTGCACAGCTTATAACTTTAATAAACATTTGAACAACGCAAATAAACATATGTGCCCAGATTGCTACATAATAATGGACTTAAAAGAATATAAATCTCACGCGGAAAAAAATCTCCTGAACGTTTTTCTATGCGACATTTGTTTAAAGTGTTTCGAGAAGAAAAAATACTTTTTGGCCCATAAAAAGAAACACGAAAGAGGCAGCCATGTTTGTGCTTATTGTAAACTGACATTTTCTAATTTTAATAAGCTGATATCTCATGTATCTTCACATAAACCCTGCATTTGCACGACATGTCAAAAGAAATTTTCTAATAGATCGTGCTATAGGATCCACGCTAAAGATTGCCTCGAATCAAAAGATCGATATTCAGGTAAATTTGTCTGCGACTACTGCCTCATAGTTTGCAAGCGCAAAGCTACACTGAAAACTCACATAAGATTAATGCATCTCTCCGGTCAGAAACTCCAGTGTGACAAGTGTGGAAAAACTTTCATAAGCAGAGCCCATTTGGAGGAACATGGCAACACTCACGATAAAGTCGCGAACCGTTACGTGTGCGAGTGCGGTTTGAAATACAGCACGCGTCGGGGTTACCAGATGCATTTGCAAATTCATTCGTGTAAAAAAATCGATCAAGTTGCCGATTTAAATCGGAAAAAAAAGGTTGTGGAGGAGACGGCCTTGCCCCAAGGTCTATGCAGAATATGCTTCGATGACATCGTCGGGGCCTTCCACATCAAACAACTCTGCAACATATCAGCCCATCACTGGTCCAATGCGACCACATATCTCACACAAATCCACGAGCCAACTGACGCAGATAAAAGTTACTTTGTCTTTTACAACAGCGGTGAGAACACCATAGTGAAAGATCAAGTCGATCGTATTAAGAATACAAGAGATGCAGTCGAAAGATTGAACGGAAAATTCGAGTTTGAACTTCCAAAACCGGCGAGGATGAAAAGGTCAAAAGATGTGACCTGCAAGTGTTCGGATTGCGGGAAAACGTTCACTAATCCGTTCTATCTAAATAAGCATCTTAAAAGCACAAGTAAGAGAGCATGTAGCGTCTGCGGTCTTGTTGTTTCAAAGAAGAATTTGAGCAAGCATTTGTCTAAAGCCCACAATACAGTCGCATTTGCTTGCAACAGTTGCAACGAGCTGTATTACGACGAGGAATCATTAATGCAACATTGGCTTAGGGCACACCAAGCTCAGAAGTTTACCTGTGAAGATTGTGGTCGGGGTTTCATGAATGAACGCGCGTTGAGCGCCCATTGGTACTCCCACAGCCTGTTTCATTGCAAATCCTGCAGTCTAAGCTTCGAAAATCGCAAATGTTACAAGCACCACGAAAAACAGTGCAACTCTGATGAGTTACCAGCATCCTCGAATTACGAATGCGATTACTGCGGTGTTACCTACACAAAGAAGCCATCATTGAAAGTGCATATAGTGCAGAAACATTTGTTTGTTCTACCGTTTGTTTGTACTACGTGCGGGAAGCGTACGTCGACTAAAGGACATTTGAGATCTCACGAAATGACGCATAAGAAGGAGAGGAAGGTTTACGAGTGCTATTGCGGTGCGAAGTTACGTTCTGAGTTAGGTTACCAGCTCCATCAGAGGATACATAGCGGGGAGAAACCTTTCACGTGTGAGGATTGCGGAGATAGATTCCTCTCCTCTTCAAGGAGGTTGGACCATATAAAGAGGAAGCACAGAGGGTCTAATGGTCTTCCATACGCGTGTGATAAGTGTGCAGCGCGTTTTGTAAACGATGAAGCTCTATGCCCACCGGGTGTCTGCGTCGGTTGCGCCAGCACGGCCCTCGCCGCCCAAGAGTTCAGCATCTTCGTGAAGAACACACAGAAAATGTGGCACAAAGCTGTCTCTAGTTTATCATTTCTTTCCGCCTCCACAGCGCCCAACGTGAAATCTATTTTCGCCTTCGTCAGAAAAGGGGACTTGTCAATCCAAACCGTCAGAGACTTCGTCGGTGGCGACGCGAAAACCGTACTAAACCGTCTCAAAAATCGATTCGGTAAAAAAACCGTCGATAAAAAACCGAGGAACGCCCGCACTGGACCTACTTGCTCGTGCCCCGACTGTGGAAAATCCTTCCTCAGCCCATATTATTTGAATATGCATTTGAAAAACAGCGGCCAAAAAGATGCTTGCTTATTATGTGGGACTGTAGTCTTTAGAGGACGCGAAATGAGAGACCATCTCTCGTCAATACACAAAGAAACAATGTTACTATGTAAAAAGTGTCCTATGTTGTATAATAGTGAAGCTAAACTCGCGAAACACGTCAGAAAAGCGCACAGTATCGGAGTGTTAACTTGTAGTGATTGCGGCCGCACCTTCCCTAGAAATACCTCCTTCGAAACTCACTCACAAATGCATGCGGTACGCATTTGTCGTGCTTGTGGCGTACAGTTCACCAATCGGGGTTGCTACAGGGAACATAGAGCACAGTGCGAGCCTGACGCAAAACCTGACGCGCAAACTGTACCCCGAAATCGACGTTCTAACATCCGCGACCCAGCCCAATATACTTGCGACCATTGTGGTAAAACTTACAATTCCCGACCGCAGTTAAAAAACCATATAATTTGGATCCATATGGATGTGAGACCCCATCAGTGCCAATGGTGTGGGAAACGGTTCTATACGCCAGCTAGACTAGCAGAACATACGGTTGTTCACACACGCGTCAGAAACTTCGGTTGTGACATCTGTGGTGCGAAATTAGTTTCGAAAATGGCCGCGGTTTATCATAGACGACGCCATACGGGCGAAAAGCCGTATAAATGCGAAGATTGTGGGGAGTCCTTTATTTCCGCGTCACGTAGGTCGGAACACGCTAAAAGGAGGCATAATATTTTAAGAATTAACTGTCCGATGTGTCCCGCTACTTTTGTTAGGCGATACGATTTAAAAAAACATATGAATAAAGTTCATAAAACAGAGGATAATGATAAAAGTAAAGATTTTAGTGTTGTGTGTAAAACTGAGAATTGA
Protein Sequence
METSKLLPNRLCNYCVTKVFDFIPFMKLCKESNQKWRRAVENLQLSQTTTKDVHIVLDNDLEKRDVLYCPKTKENTPSEALKVLKQRITRRRLYKRRTEKEKRLKAFKNPNLKCPECDKHFCTAYNFNKHLNNANKHMCPDCYIIMDLKEYKSHAEKNLLNVFLCDICLKCFEKKKYFLAHKKKHERGSHVCAYCKLTFSNFNKLISHVSSHKPCICTTCQKKFSNRSCYRIHAKDCLESKDRYSGKFVCDYCLIVCKRKATLKTHIRLMHLSGQKLQCDKCGKTFISRAHLEEHGNTHDKVANRYVCECGLKYSTRRGYQMHLQIHSCKKIDQVADLNRKKKVVEETALPQGLCRICFDDIVGAFHIKQLCNISAHHWSNATTYLTQIHEPTDADKSYFVFYNSGENTIVKDQVDRIKNTRDAVERLNGKFEFELPKPARMKRSKDVTCKCSDCGKTFTNPFYLNKHLKSTSKRACSVCGLVVSKKNLSKHLSKAHNTVAFACNSCNELYYDEESLMQHWLRAHQAQKFTCEDCGRGFMNERALSAHWYSHSLFHCKSCSLSFENRKCYKHHEKQCNSDELPASSNYECDYCGVTYTKKPSLKVHIVQKHLFVLPFVCTTCGKRTSTKGHLRSHEMTHKKERKVYECYCGAKLRSELGYQLHQRIHSGEKPFTCEDCGDRFLSSSRRLDHIKRKHRGSNGLPYACDKCAARFVNDEALCPPGVCVGCASTALAAQEFSIFVKNTQKMWHKAVSSLSFLSASTAPNVKSIFAFVRKGDLSIQTVRDFVGGDAKTVLNRLKNRFGKKTVDKKPRNARTGPTCSCPDCGKSFLSPYYLNMHLKNSGQKDACLLCGTVVFRGREMRDHLSSIHKETMLLCKKCPMLYNSEAKLAKHVRKAHSIGVLTCSDCGRTFPRNTSFETHSQMHAVRICRACGVQFTNRGCYREHRAQCEPDAKPDAQTVPRNRRSNIRDPAQYTCDHCGKTYNSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFGCDICGAKLVSKMAAVYHRRRHTGEKPYKCEDCGESFISASRRSEHAKRRHNILRINCPMCPATFVRRYDLKKHMNKVHKTEDNDKSKDFSVVCKTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-