Basic Information

Gene Symbol
-
Assembly
GCA_905147785.1
Location
LR990508.1:4045892-4048150[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.3 9.5e+03 -2.7 0.0 4 18 155 169 154 171 0.90
2 5 4.5e-05 0.081 13.5 0.1 1 37 260 298 260 307 0.90
3 5 2.3e-07 0.00042 20.9 0.1 3 43 315 359 313 362 0.93
4 5 2.5e-08 4.4e-05 24.0 0.0 1 43 366 408 366 410 0.96
5 5 2.1e-07 0.00038 21.0 0.0 4 45 419 462 418 463 0.94

Sequence Information

Coding Sequence
ATGGATTTGGACAACATGTCTAGTGATAGCGAAAGCGAAGAAGATCTGGATTCACAATTAGATGATCTAAACCTTATGAGCAAGGTCTTGGAATCTGAGGACTTGAGTCAATCTAATTCCAAGTTTTTATCTATTGGTTGTAATGATCCTACGGGATCAAGCATAACCCAAGAGTACTCCAATATTGATAAAGCAATTTACCTTAACAAATTATGTGATGAAAAGTTACAGAGCTTGGAAATGCACCTACTTAATCGCTTACAAGAGTGTCGACAGAAACTTAATGCATTAAGAAATCCATCAGCCGTGGACCAGGACAAACAAGACACATTCCGCTATTTTAACTGTGGAAAGCCTTACTTTAAAGATAAATCTAATTTCCCAGCACCCGATAATGAAGACACCATACTCATGGCCAAGTCACAAATGTATGACTTCACTCAAGTGGTATCTGTGCCAGGCTGGACAGTTAGGGATAAAAGTAAATTTATGTCATTATTACACAAAATGTCTCAAGAAATACGCAGGAACGAATTGCACTCAAAAATTGCACAAATACGTCGTGAAAGCAAATCTGAGAATAATAAGAAAACTGAAAATCTTATTAAGAGTATTAGAAAAGAAATAGACAAATTAAGCAAAAAACCCTTGAGTGAAATTGCTTTGCCAATTGACCAAGAATATGACTGGGAAACTTTATCTAATAAGTTAGATCGTAGGCACACGGCACAAGAGTATCAAGCACTGTGGAAGTTATATTTCCATCCGAGTATAAATAAAAATAGTTGGGATAGATCACAACATGAATTGCTACAGATGATTGCCCAACAAAACAAAGCACAAGATTGGGATGACATTGCCAAAAAGCATAACACAAACCGAACTGGTTACCAGACCTTTGTTTATTACCGAACAAATATGAATAATAAATTTACTGGCCGCAAATGGAGTAGAGAAGAAGTTGAGTATCTAAAACGACTAATTGATTATTATAAAGAGGATAGTTATATACCCTGGGGTAAAGTTGCTGCTTCTATGGAAAATAGAACCAAAATCCAAATTTACAATAAGTATTCTCGACTTATAGAGCAACGAAAAGGTAGATTTCTTCCGGAAGAGGATGCTGTAATTCTCAATTGTATTGATAAGTTTGGTTTTAATTTAAGAAAAGTGATGAGTTATCTACCAGGTCGCTCTATGATTCAGATTAGAATGAGATATAAAGTTTTATCTAAAATGAGGGTGTCAATAGTGTGGACAGTGAAAGAGGACAAAAAGCTTATTCAAATAATGGCTAACCAAGATTCATCTATGAATTATTCTGATATAACTAAACATTTCCCTGGAAAAGACAGGGTGCACCTCAGGAGCAGGTATTTAACACTAGTGAAATGGATGAAAAAACATCCCAATAGTGATTTAGATCTAGCACCTCGCCGCGGCGCTCGTCGACTGAGACATGGACATGCTACTGAAGATTTAAATAAAGCAGTTGAAAATTTGAAAAATCGAATGGTTACTGAAGTTCAAATAAAAAATAACAAGAGGATTTCTAGAGAATCATCAGAACAGGATATTGAGGATGCTATTATAGCCACTTTGATTAATGAAAGCTTAAAAACTGGTGATCAGGATGATTCTGATGATGACCCAGGTGATATGAAATTGCAAAATACCTTGGTATTATCAGATGGAAAACTTAATTTAACTAATATAAAAAAAACACTAATTTTATTGAATTCTAAACTTAATTTGGAGCTATACAAGGATAGTTTTTATAGTAACAAGTACCCTGGATTGGGAGATATAACTAAAGAAAAGTCTCTGATAAAAGTTAAATCTTATTCAAAAAAGGAGAAAGTGAAAGAAATCCAATTGTCTAACTGCCCAGACATATGGGGTAGTGATTCACTTGGGCCTTTGAATTATGTGTTCCCTCCTCATTATGCTACTATAACTGGTTGTAGAACATTAATGATGCAAATTACAACTCGGCATATGAAGGACAATTGCCCTCTTAATCTTAATGTACTAATGAGAAAGAACTATCTTCTTAAGGCTCAAGTTCAGACCCTGTTGGAAAGATTTTATCATTTGTTTCTATGGCCTATGATACTTTCTAATGAAGGACCAAATATTGCAGCCATAGAAGCAAACAAAGCAAAAATGTTGCGTAATCCAAGCTCATGTAATCCTAATGTCACATTAAATATGAAGGTTAACAATAATTGGATAGTGAGTGATACTGATTCTGATTAA
Protein Sequence
MDLDNMSSDSESEEDLDSQLDDLNLMSKVLESEDLSQSNSKFLSIGCNDPTGSSITQEYSNIDKAIYLNKLCDEKLQSLEMHLLNRLQECRQKLNALRNPSAVDQDKQDTFRYFNCGKPYFKDKSNFPAPDNEDTILMAKSQMYDFTQVVSVPGWTVRDKSKFMSLLHKMSQEIRRNELHSKIAQIRRESKSENNKKTENLIKSIRKEIDKLSKKPLSEIALPIDQEYDWETLSNKLDRRHTAQEYQALWKLYFHPSINKNSWDRSQHELLQMIAQQNKAQDWDDIAKKHNTNRTGYQTFVYYRTNMNNKFTGRKWSREEVEYLKRLIDYYKEDSYIPWGKVAASMENRTKIQIYNKYSRLIEQRKGRFLPEEDAVILNCIDKFGFNLRKVMSYLPGRSMIQIRMRYKVLSKMRVSIVWTVKEDKKLIQIMANQDSSMNYSDITKHFPGKDRVHLRSRYLTLVKWMKKHPNSDLDLAPRRGARRLRHGHATEDLNKAVENLKNRMVTEVQIKNNKRISRESSEQDIEDAIIATLINESLKTGDQDDSDDDPGDMKLQNTLVLSDGKLNLTNIKKTLILLNSKLNLELYKDSFYSNKYPGLGDITKEKSLIKVKSYSKKEKVKEIQLSNCPDIWGSDSLGPLNYVFPPHYATITGCRTLMMQITTRHMKDNCPLNLNVLMRKNYLLKAQVQTLLERFYHLFLWPMILSNEGPNIAAIEANKAKMLRNPSSCNPNVTLNMKVNNNWIVSDTDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-