Tbat009331.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990504.1:8966205-8969119[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-09 3.4e-06 27.1 0.1 1 43 17 59 17 60 0.94
Sequence Information
- Coding Sequence
- ATGCCTAACAAGTACAAAAGAAAGGCTGCAGCCCTAAGAGGAAATTGGTCAGAAGAGGCACTCAAGGCTGCAATGAGCGCAGTAAAAAATGATCGATTATCCGTACGTGCGGCAGCTCAGCAGTTCCTAGTACCACGCAAGACATTAGAAAGAAGAATAAAGAAGAATAATGATAAAAAGGGACCCATGGGGCCATCTTCTTTATTTGGAGAAGAAAATGAAAAGAAGTTGGTTAATCATATCAAATCTATGCAAGCCAAAGAAATGCTGTTGTGCGGTGCAATCGATGATGTTCGAAAAATAGCTTACGACTTCGCGGAAAAGCTTAAGTTAAAGCATAGATTTAACAAAGAAACTCAAAAAGCAGGATATGACTGGCTGCAAATGTTCTTAAGTAGAAACACGGATATTAGATTAAGAAAGTCAGAAGGTGTTTCTTTGGCTAGAGCCAACGCTATGAATAGGTCGGAGGTAAAAGCATATTTTGAACTTCTTGAAAGAGTCCTCATGGAAGACGGTGAGATTTTACCAGCAAATTGCGTTTTTAACATGGATGAGACAGGTCTACAATTAAACAGTCGGCCAGGTTACGTGCTTGCTAAAAAAGGTTCAAAAGTAGTTCCTACAGTAACATCAACGGAAAAAGGAGAGACTATAACTGTCATAGCTTGCTGCAATGCTGAAGGTACGTTTTTGCCACCGGTTTGTATTATGAAGGGAAAAAATAAGAAAGCTGAGTTTGAAGATAATATGCCTCCAGGAACAAAACTGTTCATGTCACAAAAATCGGCTTATATAACTTCTGAAATATTCTTAGAATGGTTAAAAACACACTTTGTCCCACGAAAGCCTGCCAGGAAAGTTGTACTTTTACTTGACGGACACTCAACTCACTGCAATTCCGTGGAAATGTTAGAGTATGCTAATCAGAATGATATTATTTTGATATCAATGCCAAGCCACACGTCCCATTATCTCCAGCCGTTAGATCGTTCGGTATTTAAATCTCTAAAAACTCACTTTTATGAACAGTGTAGACTTTGGATGAAACAAAACACAGGGCGTCGTATAACAAGACTTTCTTTCGGAGCCTTGCTTAACAGAGCTTGGGGAAAAGCAGCATCAGCGGAAAATGCGATATCTGGCTTCAGAGCTACGGGAGTATATCCTTTCAATCCAGAAGCAGTCCCAGATTACGCTTATAGTCAAGACTCCATAGACAACCAGCCAAATACTCCTATTTTACGAATGGATTCAACCCCAACTAAGTCTGCAATAGAAGATAATATATTTATATCAAGTTCTTCAAACGAGCCAAATATAGAACCAAACTATAGCCCGGAAATGATTTCCCGAAAACCACCATTAAAAGCTGCTACTGCATCAAAGATTTTAGAGCCAAGCACTTCAAAGGAAGGTTCTTCCGGTAAGAAATCAAATTACACTCCATCGCGAATTTTGCAGGAAATATCTCCTATTCCACAAAAGCTTATTGAAGTTCGTAAAAGAGCAAAGCAAGTAGGTACACTATTAACTTCAGAACAACATATCACAGCTAGAAAATGTGCTGCTGATAAAAAAATTTAA
- Protein Sequence
- MPNKYKRKAAALRGNWSEEALKAAMSAVKNDRLSVRAAAQQFLVPRKTLERRIKKNNDKKGPMGPSSLFGEENEKKLVNHIKSMQAKEMLLCGAIDDVRKIAYDFAEKLKLKHRFNKETQKAGYDWLQMFLSRNTDIRLRKSEGVSLARANAMNRSEVKAYFELLERVLMEDGEILPANCVFNMDETGLQLNSRPGYVLAKKGSKVVPTVTSTEKGETITVIACCNAEGTFLPPVCIMKGKNKKAEFEDNMPPGTKLFMSQKSAYITSEIFLEWLKTHFVPRKPARKVVLLLDGHSTHCNSVEMLEYANQNDIILISMPSHTSHYLQPLDRSVFKSLKTHFYEQCRLWMKQNTGRRITRLSFGALLNRAWGKAASAENAISGFRATGVYPFNPEAVPDYAYSQDSIDNQPNTPILRMDSTPTKSAIEDNIFISSSSNEPNIEPNYSPEMISRKPPLKAATASKILEPSTSKEGSSGKKSNYTPSRILQEISPIPQKLIEVRKRAKQVGTLLTSEQHITARKCAADKKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01436976;
- 90% Identity
- iTF_01436976; iTF_01436977; iTF_00632702;
- 80% Identity
- -