Tbat004697.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990487.1:12800139-12801935[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-08 3.2e-05 24.0 0.0 1 39 15 54 15 57 0.93 2 2 0.7 2.9e+02 1.7 0.0 18 30 190 202 186 213 0.82
Sequence Information
- Coding Sequence
- ATGCCGCGAAATTATGTAAGAACATCGAACCGTCAAACGTGGAGCGAAGAACAAATGAAAAATGCTATTATGGAAGTCATAGAAGGTAGAAGTGGATACCGTCTCGCTTCTCGGACGTTTTCGGTGCCACAGTCGACGCTAGAAGATAGAGTAAAAAAGTACAGAATTAATAACGATATCACAGCTGCCTCAAAAAAAGGATTAGGTCGTTTTAAGACCATTTTTACGGATGAGCAAGAGAATTCTATGTGCCAACACATTAAAGACCTTGAAGCTCAATTATTTGGACTAACATATAGGGATTTTCGATATCTAGCTTTTCAAATGGCAGAAAAAAATGGTATAGATCATAACTTTAACAAAAACACCGAATTAGCTGGAATGGATTGGCTCTATGGGTTTCTACGTCGCCATCCAGAATTATCACTGCGGCTGCCAGAGCCAACTTTCCCTCCCCATTGCACACATCGCCTTCAACCACTTGACGTTAGCATCATGGGACCAATCAGCACGTTTTATAGTCAAGAAGTGATGACATGGTTGCGTAATAATCCAGGACGTGTAGTTACCCAATTTCAACTTGCCAAATTATTTGGTATTGCATATGCTAAAGCAGCAACACTTCAGAATGCTATAAGTGCATTCACAAAAACAGGCATTTGTCCGTTGAATCCTAATATCTTCTCTGATCATGATTTTATATCTTCTACTACAACGGACAATGAAATCCCAGCCTCTGAACCTACTCCAAGCACATCTGAATCCGTTACAGCTGTGATTAGAGACAAAAATACTGTTAATAACACGATTGTTGACAAGAATGTGCCTGTGCACAACGCAAAAGTGATAAACTCGCATTCATCCTCTGCCGAGCAACTAGGAGTTAGCCCACGTCCAAACATTGCATTGCCATCAGCATCAACTTCTGCAGCAGTTTCGCCGGCTGATATTTTACCAAAACCTCATGTCGTCAGAAAAATCAATTCAAATTCTCGAAGAGGCAAAACTGCTATAATTACATCATCACCCTATAAAGCAGAATTAGAAGAGAGCGCCAAAAAGACAAACAAGAAGAAAGTTCCTAAACTAGATGCTAAAATTGCAAATCCTAAAAAGAAAAAGTTTTCAGATAATATGTGTGTGTACTGTTCGGAAATCTATGGAAATACACGAAGGAGTGATGATTGGGTGCAATGTTTAAAGTGTAAGAAATGGGCTCATGTGGGTTGCACAGGTTGGGAAGAAGAAGAACTTGATGATTTCCTTTGCTTCCGTTGTTAA
- Protein Sequence
- MPRNYVRTSNRQTWSEEQMKNAIMEVIEGRSGYRLASRTFSVPQSTLEDRVKKYRINNDITAASKKGLGRFKTIFTDEQENSMCQHIKDLEAQLFGLTYRDFRYLAFQMAEKNGIDHNFNKNTELAGMDWLYGFLRRHPELSLRLPEPTFPPHCTHRLQPLDVSIMGPISTFYSQEVMTWLRNNPGRVVTQFQLAKLFGIAYAKAATLQNAISAFTKTGICPLNPNIFSDHDFISSTTTDNEIPASEPTPSTSESVTAVIRDKNTVNNTIVDKNVPVHNAKVINSHSSSAEQLGVSPRPNIALPSASTSAAVSPADILPKPHVVRKINSNSRRGKTAIITSSPYKAELEESAKKTNKKKVPKLDAKIANPKKKKFSDNMCVYCSEIYGNTRRSDDWVQCLKCKKWAHVGCTGWEEEELDDFLCFRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01436965;
- 90% Identity
- iTF_01436965;
- 80% Identity
- iTF_01436966;