Tbat013641.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990497.1:10463406-10472598[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9e-11 3.8e-08 33.4 0.0 4 39 180 216 177 220 0.89 2 4 8.1e-11 3.4e-08 33.5 0.3 2 39 232 269 231 272 0.92 3 4 1.2e-15 4.9e-13 49.0 0.1 2 45 287 331 286 331 0.96 4 4 1.7e-18 7.3e-16 58.1 0.1 1 44 338 382 338 383 0.96
Sequence Information
- Coding Sequence
- ATGCTCGGCCACGGATTATCACGAGTGAAATGCGAACCGCAATCAGACGAAGAGGACAGCAACTCACAATTTACTCACGGATACTTTTCCAATCAGCTACCCTCATCGTCTGCTTATCCGGTGAAGATAAAAACCGAGTGTCGAGTTGAAGAAAATGTGCCATCACATTTACTCCAGCATTTACAGGGGTCTGGTCTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGGCCCGCAGCCACCCCGGTGTGCGTGAAGCAAGAACCGGCCGATAGCCCCGCGTTGACCCTGGAAACACTCCGGTCCGCCCCTCATAATGTTGCGGGCTCCATGTTGATCGACAGACACATGTCGATGTCCGCGTTTGAGTTAAAACACGAAGTGCCTGATTCCTCTGAGTTCATGCCATTGATGGCCGTTAAAGATGAACCTGTGTCTGAAGGAGAGCAACTGCAACTGAGTGGAGACGATACAAGTGACTCGAGCAGCGCGCAGCACGAGCCCACCACGCGCGGCAGTCCCAAGAGCTGGACTCAACAGGACATGGATAACGCACTGGAAGCACTCAGGAAACACAACATGAGTCTAACTAAGGCATCAGCAACATATGGGATTCCCTCAACAACCCTCTGGCAGAGAGCGCACCGATTAGGAATAGATACACCAAAGAAAGAAGGCGCCTCCAAATCCTGGAGTGAAGCGGATTTGCGCGGAGCCCTGCACGCCCTGAGGGCCGGCGCTATATCCGCCAATAAAGCAAGCAAGGCTTATGGTATCCCCAGCAGCACGCTGTACAAGATCGCTCGACGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACCGCGTGGCGCCGCGCCGACCTGCAGCGCGCGCTCGCCTCCATCCGCGGCGGCGCCTGCTCCGTGCAGCGGGCCGCCTCGCAGTACGGGATACCCACCGGCACATTGTACGGGAGATGTAAGCGAGAAGGCATAGAGCTATCTCGTTCTAACCCCACTCCTTGGTCTGAAGACGCAATGGGAGAAGCACTTGAAGCAGTTAGGGTCGGTCAAATGTCGATAAATCAAGCAGCCATTCACTACAATCTGCCGTATTCATCTCTTTATGGAAGATTCAAGAGGTGCAAGTATCAGACACAAACCCTACCATCGGTTCCACAAGATATACAGAAAACGAATGAGGCGGAACATCAAAACCAAGATATGTACTATCAGCAGATGCCCACCCATCCGGTCCAGCATCACGAGGACCAGCCACACGTCTCATACGGGCATCACGTCCAAGAGTACATGCAGGATTCATCAGTACACATGCTGCAAGACCAGTATGGACAGGCAATGTATTACAACCACGGTTTTAATAGTATAGCAACTAGCTGA
- Protein Sequence
- MLGHGLSRVKCEPQSDEEDSNSQFTHGYFSNQLPSSSAYPVKIKTECRVEENVPSHLLQHLQGSGLEELAPLAPAGPAATPVCVKQEPADSPALTLETLRSAPHNVAGSMLIDRHMSMSAFELKHEVPDSSEFMPLMAVKDEPVSEGEQLQLSGDDTSDSSSAQHEPTTRGSPKSWTQQDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALASIRGGACSVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQTLPSVPQDIQKTNEAEHQNQDMYYQQMPTHPVQHHEDQPHVSYGHHVQEYMQDSSVHMLQDQYGQAMYYNHGFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00761549;
- 90% Identity
- iTF_00761549;
- 80% Identity
- -