Basic Information

Insect: Thumatha senex
Gene Symbol: -
Assembly: GCA_948477245.1
Location: OX419751.1:9620822-9624184[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.7e-05 0.0017 19.6 2.3 1 23 745 767 745 767 0.98

2 7 1.6e-06 0.00016 22.9 1.4 1 23 773 795 773 795 0.98

3 7 0.017 1.8 10.2 5.6 1 23 801 823 801 823 0.96

4 7 7.7e-05 0.0077 17.6 2.0 1 23 829 851 829 851 0.99

5 7 7.9e-06 0.00079 20.7 0.9 1 23 857 879 857 879 0.98

6 7 0.0041 0.41 12.1 2.0 1 23 885 907 885 907 0.99

7 7 3.7e-05 0.0037 18.6 1.4 2 23 914 935 913 935 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.7e-05	0.0017	19.6	2.3	1	23	745	767	745	767	0.98
2	7	1.6e-06	0.00016	22.9	1.4	1	23	773	795	773	795	0.98
3	7	0.017	1.8	10.2	5.6	1	23	801	823	801	823	0.96
4	7	7.7e-05	0.0077	17.6	2.0	1	23	829	851	829	851	0.99
5	7	7.9e-06	0.00079	20.7	0.9	1	23	857	879	857	879	0.98
6	7	0.0041	0.41	12.1	2.0	1	23	885	907	885	907	0.99
7	7	3.7e-05	0.0037	18.6	1.4	2	23	914	935	913	935	0.97

Sequence Information

Coding Sequence: ATGGCAAAGAGGCTTGAAATTAGGCATCCAGTGATGAGACTCGTTGTCCCTGGTCGAGTCCCAGGAGAGGTTTCCAAAAATCCAGTTCCAGAGAATACAGTTCCAAACAATACTGAACCACCAGAGAATTTAATGTCAGAAACTCCAATCTCAGATAATCATGTACTAGAGAATCCAATTTCAGAAACTCCGATCTCAAAAAATCCACTACCAGATAATCCAAAGTCAGAAACTCCGATCTCAGATAATCCAGCACCAGAGATTCCAGTATCGGAAAATAGTGTCTCGAAGATTACAATCTCGAAAATTCCTGTCTTGAAAGTTCCAGTTTCTGATGTTGCGGTTTCAGAGATTCCACGTATGGACGTTCCGGTCTCAGAGGTTCCAACGAAGAGTTCAGTCTCGGCGATTCCAACCTTGGTTATTCCAGTTGAGGATTCAGTCTCGGAAAATACAAATTTAGCGAAATTAGTGCCTGAAAATCCACCCTCACAAGATCTAGTTCCAGAGAATATAAATCTAGAAAAAACTAGTTTGGAGGATCCAATCTTAGATAAACTGGCTCCGGAAAATACTGTTTCGGAGAGTTCGATACTGGAGAAACCAGTGCCGGAAGATCCAGACTTAGAAAATTCGATAGCAGGGAATGTTGACTCTGAGGAAGAAGTTGAGGATGACGCAGAAGTAGTAGAAGTCCCACAGCTGTCCATTGATGTTAAAGTGGAACACGAAGATGAAGATATCGAAGACACGACTACCATGATGAAAAGTGACACTTCGCCAACTTCAGCAGACAATAGATATCTAAAAATTTTAAAGGTTGTATTAGAAAGAATGCCAATTATTGGCAGTGCTAATATAACTAGTACTTTACGTGAATCCAAACTAAATAGTCGTGGTTCACCAGTACGAGTAACAAAATCCATTGAAACTGATAACAAAACAAATGAAAATAAAGTAAATGATCTTACCAAATCATCAAATAAGGGTCCAACAAGACAAACTAAAAACTCTATTGGAAGTGTTCACAAAACAAATGAAAATAAGAAATTAAATGAAGCACTCAAACCAACAGATCACGGTTCACCAAAACAAGTTAAAAAGTCTATTGGACCTGATCAGAAAACAAATAGAAATAACAAATCGAATGAAGTAATCAAATCATCTAGTCAGGGCTCACCAAAACAAGCTAAAAATTCCATTGGAACTGTTTACAAAACAAATGAAGATAAGAAATTAAATGAAGCTCTCAAACCAACAAATCACGGTTCACCAAGACAAGCTAAAAAATCTATTGAACCTGATCAGAAAACAAATGAAAATAACAAATTGAATGAAGTCATCAAATCATCTAGTCAGGGCTCGACAAGACGAGCTAAAAAGTCTATTGGAACTGTTTACCAAACCAATGAGGAAAAGAAATTAACTGAAGCCCTCAAACCAACAAATCACGGTTCACCAAGACAAGCTAAAAAATCTATTGCACCTGATCAGAAAACAAATGAAAATAACAAATTGAATGAAGCAATCAAATCATCTAGTCAGGACTCACCAAAACAAGCTAAAAAGTCCATTGGATCTGTTTACAAAACAAATGAAGATAATAAATTAAATGAAGCTCACAAACCAACAAATCACGGTTCGCCAATACAAGCTAAAAAATCTATTGAACTAGATCAGAACACAAATGAAAATAACAAATTGAATGAAAGAATCATATCATCTAGTCAGGGCTCACCAAGACAAGTTAAAAAAGCCATTGAAACGGACCAGAAAACAAATGAAAGAAACAAATTAAATGAAACAAAACAAGCTGTTAAAGTAAAAGAAACTAACAAAATAGAGGAAGCTGTCAATAATCAAACAAACAAAATGAACGACTCTAGTAAAGGAAATAAAGCTATCTACATAAATGAAGTTAATAAAGCTAAAACATCTGTTAAAGTGAAAGAATCTAGCAAAATAAATGAAACTACCAAAATAAATCAAGCCAACGAAATAAATGGAAAAAACAAATGCAATGAAACTAGCAAAGCTCCTGAAAATAACAGAGAAAACGGTGTCAAACCGATCATTAAACGTAAATCCGTTTATGATGTGGACAATATAGTTGGTGATGTAGTTGAAACACCTGTCAAGAAGCGAGTACGATTTAGCGATGTTAATAAAGAAAATTATATTAAAGAACAAGTACAGGTTAAAACGATTAAAACAAGAAATCTTAAAAAACCATTCACTTGTGACATATGTAAAAGATGTTTCACGATAAAAGATACTTTAAGAATTCATATTCGTGGACATACCCAAGGAAAACCTTATAAATGTGATGTATGTGACAAAAGATTTAGTCAAAAATATCCTTTACAAATCCACTATCGTTTGCACACCGGTGATAAACCATTTAAGTGTAAAGTTTGTAATAAAGGTTTTCATCGAAAAGATTGTTACGACAGACACGCTGTTATGCATTACGATGTTAAACCATTTAAATGCGAGACGTGTGATAAAACTTTTAATATATACTATAATTTTGTGCTGCATGTCCGAACACACACTGGTGAGAGGCCTCATGTGTGTGAAACTTGCGGCAAAGGGTTTATTGGAAAGAGGTCTTTAAATATGCATATACGCACTCATACTGATGACCGACCCTATAGGTGTGATATATGTAAAAACTATTACACAAGTTCTGAAAAACTGATTGAACATTTTCGTAAACACAGTAATGATAAACCAATTCAGTGCGGTGTATGTAAAGCAAATTTTATTAGTAAAAAAAATTACACTAAACATATGCGTAAACATAAAAGAGATGAAAGAAAGTTAAAAAAAAATGAGGATAAAACAGAAACCAAAATCAAATGA
Protein Sequence: MAKRLEIRHPVMRLVVPGRVPGEVSKNPVPENTVPNNTEPPENLMSETPISDNHVLENPISETPISKNPLPDNPKSETPISDNPAPEIPVSENSVSKITISKIPVLKVPVSDVAVSEIPRMDVPVSEVPTKSSVSAIPTLVIPVEDSVSENTNLAKLVPENPPSQDLVPENINLEKTSLEDPILDKLAPENTVSESSILEKPVPEDPDLENSIAGNVDSEEEVEDDAEVVEVPQLSIDVKVEHEDEDIEDTTTMMKSDTSPTSADNRYLKILKVVLERMPIIGSANITSTLRESKLNSRGSPVRVTKSIETDNKTNENKVNDLTKSSNKGPTRQTKNSIGSVHKTNENKKLNEALKPTDHGSPKQVKKSIGPDQKTNRNNKSNEVIKSSSQGSPKQAKNSIGTVYKTNEDKKLNEALKPTNHGSPRQAKKSIEPDQKTNENNKLNEVIKSSSQGSTRRAKKSIGTVYQTNEEKKLTEALKPTNHGSPRQAKKSIAPDQKTNENNKLNEAIKSSSQDSPKQAKKSIGSVYKTNEDNKLNEAHKPTNHGSPIQAKKSIELDQNTNENNKLNERIISSSQGSPRQVKKAIETDQKTNERNKLNETKQAVKVKETNKIEEAVNNQTNKMNDSSKGNKAIYINEVNKAKTSVKVKESSKINETTKINQANEINGKNKCNETSKAPENNRENGVKPIIKRKSVYDVDNIVGDVVETPVKKRVRFSDVNKENYIKEQVQVKTIKTRNLKKPFTCDICKRCFTIKDTLRIHIRGHTQGKPYKCDVCDKRFSQKYPLQIHYRLHTGDKPFKCKVCNKGFHRKDCYDRHAVMHYDVKPFKCETCDKTFNIYYNFVLHVRTHTGERPHVCETCGKGFIGKRSLNMHIRTHTDDRPYRCDICKNYYTSSEKLIEHFRKHSNDKPIQCGVCKANFISKKNYTKHMRKHKRDERKLKKNEDKTETKIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -