Basic Information

Insect: Thumatha senex
Gene Symbol: -
Assembly: GCA_948477245.1
Location: OX419737.1:20441182-20444042[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.7e-06 0.00037 21.7 4.1 1 23 257 279 257 279 0.96

2 11 4.9e-06 0.00049 21.3 0.9 1 23 285 308 285 308 0.97

3 11 0.0002 0.02 16.3 2.7 1 23 320 342 320 342 0.98

4 11 0.0037 0.38 12.3 1.8 1 23 349 371 349 371 0.96

5 11 0.00013 0.013 16.9 1.3 1 23 377 399 377 399 0.98

6 11 0.00034 0.034 15.5 0.9 1 23 405 428 405 428 0.97

7 11 0.0052 0.52 11.8 1.8 2 23 434 453 433 453 0.97

8 11 1.7e-06 0.00017 22.8 0.7 1 23 459 481 459 481 0.97

9 11 7.2e-06 0.00072 20.8 1.6 1 23 487 509 487 509 0.98

10 11 3.3e-05 0.0033 18.7 0.3 1 23 515 538 515 538 0.97

11 11 0.89 89 4.8 1.0 1 22 544 565 544 565 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.7e-06	0.00037	21.7	4.1	1	23	257	279	257	279	0.96
2	11	4.9e-06	0.00049	21.3	0.9	1	23	285	308	285	308	0.97
3	11	0.0002	0.02	16.3	2.7	1	23	320	342	320	342	0.98
4	11	0.0037	0.38	12.3	1.8	1	23	349	371	349	371	0.96
5	11	0.00013	0.013	16.9	1.3	1	23	377	399	377	399	0.98
6	11	0.00034	0.034	15.5	0.9	1	23	405	428	405	428	0.97
7	11	0.0052	0.52	11.8	1.8	2	23	434	453	433	453	0.97
8	11	1.7e-06	0.00017	22.8	0.7	1	23	459	481	459	481	0.97
9	11	7.2e-06	0.00072	20.8	1.6	1	23	487	509	487	509	0.98
10	11	3.3e-05	0.0033	18.7	0.3	1	23	515	538	515	538	0.97
11	11	0.89	89	4.8	1.0	1	22	544	565	544	565	0.95

Sequence Information

Coding Sequence: ATGGCTAACGTAAAACGTAGGTTAAATGCACCTCTAAGTGCTTCCAAACATGAATCAAAGAATAAGCAAACACGTAGATTACGTTCTGCGACTGATACAGATAATTTTGAGGGCAATCAAACTGAACCTGGAGTGACCAAGAAACGTAAAACTGCAGCAAATGATAGCGATAAGAAGTTAACATCCACTTTTGAAACTCATAATTTTATGAATAAATTCAAGACTAAGTTACTTAAAACAGTTGGTGTTAGAAACACTAGACAGTCTAAACAACTTGCAATCGATGTACCTACACCTGAATTACCAGGTCTTATGAAAACTAAAACAGTCCATCTCAGGAGTACTAAGTATTTAAAAATTATGGACAATGTAATTAAAAGTGAATTTGGTATCTCAAGTAAGTCTAAAAAAAGCTGTGCATCCTCAAACAATGGGCCAATAAATAATAATGAAAGTGAGATAATTAACCAAAATAATATGACTAAGAATTCTAAATTACCGGACAAGAGTATACCAGTCCAAACAAAGAATTTGGCACCCTTTGAGTCTGTAGATGTCTTGGAAACTCCAGAGAGTATTGTACCAGTCTCAGATAATCCAAATTGTAATAAACAACAAACTGTACTAGCAAATTTTGCAGATGAACTAAACTCACAGTTACCAGAGCAGCCCCGCAGAAAAGGCAGGCCAAGAAAGGATCAGCCTGTAATTGACAAGACTTCACTTATAAAAAACAGGAGAAAACCAGCCGTATTTAAATTGCGTTTATTTGAGTGTGATTATTGTAGTAAATCATTTACCAGAAAACATTCTCTTCTACGGCACATATATCTCCATCTTGGCCAAAAGCCATATTCTTGTCCAGTTTGTCCAAAAAAGTTTCGTGTACGTAAGAATATGAAGAATCACATGGATCGTGATCATTGTGTACGTAAAGTTGATAAGAATACAGCAACATATTCTTGTAATATTTGTGACAAACCATTTTTAACTCAGCACAATCTTAAGTTACATTCAAAAAGTCATGCCAAAGGAGAAAATACATTTAAATGTATTTATTGCGATAAAAAATTTTCCTATCAACTATTACTAATTCAGCACGAAAAACAACATTTAGTTACTGGAAAATACATGTGTACCTTGTGCGATATTAAATTTAAATCACGGGATAAATTGTATATCCATGTGAAGAGTCATTTAAAGCTTATTGATTACATTTGCAAATATTGTGGCAGGGAATTTCTAAGAGCTAATTCGATGAAGAGGCATGTTCAGACTATGCATGCAGGCCGTACAATACAATGTCCCATTTGTAAGAAAAATCTGAAAGGCCACCTGACTGAACACATGCGTACACATGACAATCAGAGGCCACATGAGTGCCCTGATTGTGGTAAACTATTTGCACAATCAACACAGCTGAAAGTGCACCGGCGTGCACATACTGGATCTCGGCCATACTCATGCAGGATCTGTGACCGTCCATTCTCACATTCTAATGCTCTCATGTTACATCTTAGACGTCATACTGGTGAAAAACCATTTCCGTGTGCAGAGTGCCCTATGTCATTCTCTCAATTACCACACATGAAAGCTCACATGATGAAGATACATGGAAAAATAAATCCATATAAATGTTTGAAATGTTGGGACTACTTTAAATTGAAGAAAGATCTCCTTGTTCATAAAAATACTTGCAACGGTTCTGGTATTGATACAGATCTCTACGGAGATGAGAGACCAGATGTAGAGACTTCACAAGATAATGACGCTGAAGTTGTCCCAGTGGAATCCACAATGACCTTATCCCGAATGAGGTTCCTGTTGGCTCTTTTGCTGACTATGATTGCTAGCAAAGAAAAACTCAAATATTTAGGGTTCAACAAACGGCTGGTTGATGATCTACTTTTGGAGTCACTGGAAGCTATGGGCCAAACCCCATGCAGGGATGATACCATGTCTCCTTTAGTGCGTCTCAGGACGAATATTGAAAAGTTGTTGAAAGGAACAGTACCGCGGGAGCAAATGGACAAGTTCAAGAAAGAGAAAAAGTCCACTGAAGAACTTCTGGAGTTGTTGACAAGCGAGAAAGATAAGTAA
Protein Sequence: MANVKRRLNAPLSASKHESKNKQTRRLRSATDTDNFEGNQTEPGVTKKRKTAANDSDKKLTSTFETHNFMNKFKTKLLKTVGVRNTRQSKQLAIDVPTPELPGLMKTKTVHLRSTKYLKIMDNVIKSEFGISSKSKKSCASSNNGPINNNESEIINQNNMTKNSKLPDKSIPVQTKNLAPFESVDVLETPESIVPVSDNPNCNKQQTVLANFADELNSQLPEQPRRKGRPRKDQPVIDKTSLIKNRRKPAVFKLRLFECDYCSKSFTRKHSLLRHIYLHLGQKPYSCPVCPKKFRVRKNMKNHMDRDHCVRKVDKNTATYSCNICDKPFLTQHNLKLHSKSHAKGENTFKCIYCDKKFSYQLLLIQHEKQHLVTGKYMCTLCDIKFKSRDKLYIHVKSHLKLIDYICKYCGREFLRANSMKRHVQTMHAGRTIQCPICKKNLKGHLTEHMRTHDNQRPHECPDCGKLFAQSTQLKVHRRAHTGSRPYSCRICDRPFSHSNALMLHLRRHTGEKPFPCAECPMSFSQLPHMKAHMMKIHGKINPYKCLKCWDYFKLKKDLLVHKNTCNGSGIDTDLYGDERPDVETSQDNDAEVVPVESTMTLSRMRFLLALLLTMIASKEKLKYLGFNKRLVDDLLLESLEAMGQTPCRDDTMSPLVRLRTNIEKLLKGTVPREQMDKFKKEKKSTEELLELLTSEKDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -