Basic Information

Insect: Thumatha senex
Gene Symbol: -
Assembly: GCA_948477245.1
Location: OX419753.1:3010269-3012371[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 4.4e-05 0.0044 18.3 1.9 1 23 257 279 257 279 0.99

2 10 0.0001 0.01 17.2 1.5 1 23 287 310 287 310 0.95

3 10 1e-05 0.0011 20.3 1.4 1 23 316 338 316 338 0.98

4 10 0.0013 0.13 13.8 7.5 1 23 344 366 344 366 0.97

5 10 1e-06 0.0001 23.5 1.5 1 23 372 394 372 394 0.95

6 10 4.4e-06 0.00044 21.5 0.9 1 23 400 422 400 422 0.99

7 10 9.1e-07 9.1e-05 23.6 0.2 1 23 428 450 428 450 0.98

8 10 2.3e-05 0.0023 19.2 0.3 1 23 456 478 456 478 0.99

9 10 3.6e-05 0.0036 18.6 2.2 1 21 484 504 484 506 0.96

10 10 1.7e-06 0.00017 22.8 0.7 1 23 512 534 512 534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	4.4e-05	0.0044	18.3	1.9	1	23	257	279	257	279	0.99
2	10	0.0001	0.01	17.2	1.5	1	23	287	310	287	310	0.95
3	10	1e-05	0.0011	20.3	1.4	1	23	316	338	316	338	0.98
4	10	0.0013	0.13	13.8	7.5	1	23	344	366	344	366	0.97
5	10	1e-06	0.0001	23.5	1.5	1	23	372	394	372	394	0.95
6	10	4.4e-06	0.00044	21.5	0.9	1	23	400	422	400	422	0.99
7	10	9.1e-07	9.1e-05	23.6	0.2	1	23	428	450	428	450	0.98
8	10	2.3e-05	0.0023	19.2	0.3	1	23	456	478	456	478	0.99
9	10	3.6e-05	0.0036	18.6	2.2	1	21	484	504	484	506	0.96
10	10	1.7e-06	0.00017	22.8	0.7	1	23	512	534	512	534	0.98

Sequence Information

Coding Sequence: ATGGAAATTAGTGTGCATTTATTCGATAAAATATGTCGAATTTGTTTAATACAATCTATGGACTTGAAATCACTTTTTACAAAGACAGAAGATGGACGTAGAAACTTACTTGAAATACTTGCTTTTACGGCTAATATTGATGTTAAACTAGAAGATAGTTTGCCAAAACAATTGTGTAGTGCTTGCGAAGGTATTATGTGGAAGCTGGATTCATTCAAACGACGTTGCCATGAATCTGAGACTATTTTAAATAACATTTATCGTAATTCAACTGCGGCCACTGAATTAGTTGAAAGTAGCCTCAACTTCCATATCAAAGACGAACAGACTGGTATAAAGGAGAAATTAAGCGAGTATGGTACTTTTCTGTCACCTATTCCTACAAGCAGTGGATTTAAAGATGATTTCAGCAAAAAAACTGACTTTTCTCTATGTTCGAGTACTGAACTTAGTTCTAATAAACTTAGCGTACCAGATTTACCTGATACATATAAGCAAACAGTTAAAATGGAGACTGAAAGTTGTAATGAAGATGCAAACGATTTATTAGATGTTTATGATGATGGGGGACAGTATGAAAGCCTTCCTTTTGATGACGAGCCAGAAAAACCTAAGCCTGAATCCACTAAAATTGGTGTCCGTTACGAGTGCTACTGTCATACTCAGTTTACATGCAAAGACGACTATCAATCACATTTGAAAGCAAACCAATGTAATGCTGGCAAAGTATTAAAATGTAAAATGATAAATAATGGTGATAATAAAGTATTCCAATGTTCCTTCTGCTTACGTCAATTTAAATATAAATCATCTCTAGCAGCTCACATACAGAGACATGAAGAAAATGATAGTACGAAACATGTCTGCGAAATCTGTAAACGTGAATTTAAATACAAAGCATATTTAGAGAACCATGTATTTACTGTACATTCTAAGAAAAATGATTTTACTTGTTATATTTGTGTTAAAAGTTTTTCAAATAAAGAAGCTCTCGAGACTCATAAGAAAAGTCATGATAGCGATAAAAAACATCACTGTACCGTTTGTAGTAAAGCATTTACTATGTTATGCACTTTGAAAGAACATATGCGTACACACACTGGTGAGAAGCCTTTCTTATGTTCTCAATGTGGTAAAGGTTTTAGTCAGAAGACAAACTTGGCACAACACACAAGAAGACATCAGGGTTTGAAAGCTTACAAATGTGAAACTTGTGAAAAAAGGTTTGTATCCAAAGGAGAGTTAGACGCACACACCCGTAAACACAGTGGTGCACATCCATTTGTCTGCGATGACTGCGGTAATGGCTTCACAACTTCCAGTGCTCTAGTCAAACATCGAAGAATACACACTGGAGAACGTCCTTACCAGTGTGATCTGTGCCCCATGAGATTTGCAGCATCTGGTACCCTAACGAATCATCGAAGAACTCATACTGGGGAAAGACCATTTCAATGTTCTTACTGTGAAAAAGCTTTTGTTCAGAGGAATGATTTGATTTCTCATATCCGTTGCCATACTGGTGAAAGGCCATATATTTGTACTCAGTGTGGACAGTCATTTAGAAAAGCTAGCGGATTGAAAACTCATGTTAAAATGCATATTAAATAG
Protein Sequence: MEISVHLFDKICRICLIQSMDLKSLFTKTEDGRRNLLEILAFTANIDVKLEDSLPKQLCSACEGIMWKLDSFKRRCHESETILNNIYRNSTAATELVESSLNFHIKDEQTGIKEKLSEYGTFLSPIPTSSGFKDDFSKKTDFSLCSSTELSSNKLSVPDLPDTYKQTVKMETESCNEDANDLLDVYDDGGQYESLPFDDEPEKPKPESTKIGVRYECYCHTQFTCKDDYQSHLKANQCNAGKVLKCKMINNGDNKVFQCSFCLRQFKYKSSLAAHIQRHEENDSTKHVCEICKREFKYKAYLENHVFTVHSKKNDFTCYICVKSFSNKEALETHKKSHDSDKKHHCTVCSKAFTMLCTLKEHMRTHTGEKPFLCSQCGKGFSQKTNLAQHTRRHQGLKAYKCETCEKRFVSKGELDAHTRKHSGAHPFVCDDCGNGFTTSSALVKHRRIHTGERPYQCDLCPMRFAASGTLTNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGERPYICTQCGQSFRKASGLKTHVKMHIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -