Tsen023239.1
Basic Information
- Insect
- Thumatha senex
- Gene Symbol
- -
- Assembly
- GCA_948477245.1
- Location
- OX419729.1:9084628-9093176[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0058 0.59 11.7 1.5 3 23 207 228 206 228 0.96 2 23 0.28 29 6.3 0.3 1 22 609 630 609 630 0.95 3 23 6.2 6.3e+02 2.1 0.4 1 22 672 693 672 695 0.82 4 23 0.013 1.3 10.6 1.2 3 22 706 725 704 725 0.94 5 23 0.11 11 7.6 0.1 3 23 734 755 732 755 0.89 6 23 0.015 1.5 10.4 0.2 3 23 775 796 773 796 0.96 7 23 0.00037 0.037 15.4 1.8 1 23 802 825 802 825 0.95 8 23 0.1 10 7.7 0.0 1 23 852 875 852 875 0.90 9 23 0.0046 0.46 12.0 3.5 1 23 880 902 880 902 0.97 10 23 0.038 3.8 9.1 0.2 1 23 908 931 908 931 0.95 11 23 0.0019 0.19 13.2 1.3 1 23 944 966 944 966 0.97 12 23 0.00015 0.015 16.7 1.8 1 23 1021 1044 1021 1044 0.97 13 23 0.0046 0.46 12.0 1.6 1 23 1106 1129 1106 1129 0.96 14 23 0.002 0.2 13.1 2.1 2 23 1153 1175 1152 1175 0.95 15 23 0.072 7.3 8.2 0.1 2 23 1181 1203 1180 1203 0.93 16 23 0.0083 0.83 11.2 0.2 1 21 1247 1267 1247 1268 0.95 17 23 0.00035 0.035 15.5 1.0 1 23 1278 1300 1278 1300 0.93 18 23 7.3e-05 0.0074 17.6 0.3 2 23 1390 1412 1390 1412 0.93 19 23 2.8e-07 2.8e-05 25.3 1.4 3 23 1419 1439 1418 1439 0.98 20 23 0.021 2.1 9.9 0.6 1 23 1460 1482 1460 1483 0.93 21 23 0.1 10 7.8 0.0 1 23 1507 1529 1507 1529 0.97 22 23 0.023 2.3 9.8 0.6 1 23 1535 1558 1535 1558 0.95 23 23 0.00021 0.021 16.2 0.4 1 23 1566 1589 1566 1589 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGTGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTCCCGTCCTCGCTTCTAAAATCAAGGATTGTGTCTCTGTGGAGATAAATGAAAATGATGAACTGCCAACAAATGTCTGCAGGAAATGCATGGATAATGTCAATAATTGGCATATATTTAAAAATGTTTGTGATAGGACACAAAACAAACTACTGTCTCTGAATAGTAAAGATGGCAGCCAACTAGAAGAGGTGCAAATTAAGAGTGAACCACTCTCTGATGAAGCATATGATGATGGAGTGGTTATTGAAGGTTCCTATCCTGATAGTGAGAATACCAGTGTGGCAAATAAAATTCAAACTGAAGGGCCTCCAATACTGGCTTCATTGGGCCTCACACCAAGGAGTGATAAGGGAGTGGAGAGTGAGAAAGATGAAGAGGAAGAACAAGACGAAGGGTTGAATGAACCTCAACAGATGGCCAAGGTACCAAACATGCCAGAAGTTTCTATAACTGTTATGCGACCGACCGGCGAGACTCTACATGCTCGACAAGGTATTCACCAACTGGCTTCTAAAGACTGCCTCGTCTGCGGCCGCAGTTACAGATATTCACATAATGCCCGTCGCCATGAACTTACATCTCACAGTTTTGACAGATATACAAACAAAGTTAATCCCAAAAAATCTCATAGTCACCTCCAACCCAAACTTAGACCAAATCCATTCAACCCTAAAGCACGATTGATGCCCAACCCCATTAGTCATAAGATGCAATTCATGTCAAAAAACATGCCAGCTAAAGTACCCATTAATAAAGTAATTATGCCACAGAAACCAATTCCAATTAAATCCGCTAAACCACAACAAAATAATCTACCGTATCCTCTTCGTATTAAAGCCCTTAAAGATTTGCAAATAAAGAAAAAGGAGCCTCAAATTTTAAAGACCTTATTAACCTCAAAACCCGAAGTCCTAGTGTCAGAACCAGAAATTATGAATTCTGGTCCAGCAAGCCCTGAGACGTTAATATCTGAACCAGAAATTGCTTCGTTCCAAGTGGAAACAATACTTTCGGAACCTGATACGGAACTGTATGATCAACTTCAGGGTGATGAGGATGACGAAGATGTTCAAAATAATCATGGTCAACAATATGATACAGTAGATATGAACTCTGAAAATGAAATTGAGATAGCTCGCCAACAGGGTGGTGAGGGCGATGAACAAGCGGAAGGTAATGAAAATGTAGATCAAAATCTCGATAACAATATGGACGGTGGCCATAGTGATAACGATCAAGACCAGACTGATCTTGTCGATGATACCATTGAAAGTCAAGAAAATACAGAAATGGAGGACAGTCTTGAAATTAAAGCAGAACATGACACCAAGGATGGTGAAGACATTCAAGACGAGAGAGACCATGATGAAACAGAAGTAAATCACGACGGTAATGACGAAGATGATGAAGATATACCAATAATACAGCCTGTCGTTGAAATCAACGAAGACATGCAGAACTCGTTTAATACTGCGGCAGCCGAGGATGACGAAATCGACGAGACTGTTGATCCGAACGAGACCCTTGAGGATGAAGAGGAGGCGGTCAAAGAACTTGACCCTAATAAAACCTATGTCACAAAGGCACAACGAGATTTTATTCAGAAATATCGTGACGTTATTGAACAAATCAATACGAAACGTTGTTTATGTTGCGATAGAGAACATCCACGTAGGAAAGCTGTTATTCAGCACTTGCAGAAGAATGGGCACAAGGTACCTAAACATACCTGTTATAATTGTGTTGTTACTTTCGGACATATCGGTGCTCTACTCAGCCATATGAGATCAAATTCTTGCACGGATTTGTGGAAGATTATTTATAATGAAAATGGTATTACTGATGACTTGGTTCTGGAGGATGAACCTAAGGAGGTCAAGGTTCAGTCCAAAGACATATTTAATGCTAGATCTTATGCTTGCAAGCTTTGTCCAGCTAAATTCCAATTGAAGCAGTTCATTATGAAACATGTTTTAGATACTCATGAAGATGGACAATCTAGAGTGCCCCTCGCTTGTGTCCATTGCCGTGCAAGGTTTAAGGAAAAGACTATGCTCAAGAAACACATTCGTAAAGGGGATTGTACTGTTTATGTGGCTTGTGATCTGTGTCCAGAAACATTTAAGAATATGCAACAATTCAGTGACCACGCTTTAGCTGTTCATGCCGGTAGTTTCGAGGCTGACAACCAAAGCAAATGCGTTGATGGTCGCCCAACTGACTGTCCGTTGTGCGGTAAGAAAAATAGCAGTTACCCGAATTTAGTAAAACATTTGAAAATTATACACAACGAGGAAACACCTCACTATTGCCAACATTGCGATGCAAAATTCGAACAAGCTGCAGATCTTAACAAGCATATTTATATGGAACATTCGGACCGAACTTTGGGCATGCCGCAAAACAATGAAGTGGACATGTCCATTGTGAAAGAAGAGGCAGAAGAATACCATTATTCTTGCACTGAATGCAACGCTATCTTTGAAACAGTTGACGCGTGGACTGACCATCAGGTTGCTGAGCACAATCAAGTGGCTCACCATTGCGATCAGTGTGACAAGAAATTCTTACGGCCCTCTGAGCTTGCCGAACATAAAAATACTCATTTGAGGGTTAAATTCTATCCTTGTAGTATTTGTGCTAACTCTTACAGCACTCCTCAAAAACTGTCTGAACATGTACAACAATCCCATCCAGGAATAGGTGCCCTCGCTGCATCTGAGACTGAATTCTTTTGCGACATTTGTATCAGGTCGTTCAAGAGCCGTCAAGCTTATTCAAATCACATGCGTATACACGCTAAAGTACCAACTACGAATAGGAAACCAGGAGAAACCAGTACTCCTTCTAACAAAGGATTTTCTCCATCAATTATTGGCAAACCCATCAAACAAGTATTCCCTATGGTTCAACCAGGGTTTGTATCGTTCAAACCCCATTATAATATTCCTAATGCTCCCTATTCCTGTGACATTTGTGGTAAAGGATTCATGCACAAAAAGAATATATGGAAACACAAGAAAGTTTTGCATGCAGATATATTAAACGAAAGGAATGACAGTGAGGAGAATACCATGCAAGCCTCCACAGAAGATGACGAATTTAATCTAGATGAAAATGGAGCAGTTTTGTCCACGCCACAGTTTGACAGTTTCAATTTTGGCAATTTCGCCAATAATGTCCAACAATCCCAATCCCAACAGGATACAATGCCTTACTCATGTGAATTGTGTTTCAAACGGTTCCCGCTTCGAAATAGTTTGTGGAAGCATAAACGTGCTAAACACGGAATCGTAAACAGTGGCGGTAACGAATCGCAGATGCCGTCTGCGAGTGGCGAAGGAAGTAGTAGATCCAGTTGCACAATATGTAGAATTACATTTTCAGATAAAAAATCTTACTATCGTCATCGAAAGAATGTTCATAAGTCCACGGTTCAAATGTGCAAAATATGTGGAAAGCCTCTTAACTCAACTTTGGAACTCTATGAACATTTAAAGGCTGCTCACGCCAGAGAGCTTTTAGGTTATAACGCTAATCAAGGTTCCAGTAAAACTCTTGAAGTGACCCCAGATATTGAACCAGATTATGACAATGATCAGGAATCTATGGATCCCAGTGTCGATTACCAAGCTCGCTACCCGTGCGATACTTGTGGTAAACAATTTGTCGGTTTGTTGGCATTGCAGAACCATCAATGCATAAATCAGGCTCCACCACAGCCACAAACATTCGACTGTGAGATTTGTCACAAGAGTTATACTTCAATATCAGCCTTAAAGAGCCACCGAGGATGGCACTTACGATCACCAGATGGAAAAGCGGCTGCTAATAACAGTGGATTGTGGATGCCCCAGCACAAAGTGACAAGTAAGATAAGTAAACATGAAGTTCTCGATCCAGTTCAAATAGCCAAAGTGTCTCATACTGGCCCTCCCGTCGCAGTAGCGGCTAAGAGAAGACTCCCACCGGAGGTCGAAGTCACTGTTGTTAATCCCAATAAGAAAATGCGCTCTGACGACTCTGTTGAATTAGAACAGCAAAATTCTAGTTCGCTCGAAGATAGATACTGCAATATTTGTGACAAGGAGTTTACAAAGCGAGCAGCCTATCAGCGTCATATGGATGAGGTGCACCAGCCGAATTCTGTGTTCTGTCCAGTTTGTGACAAGAGCTTCACTAGAAAATCAACGCTACTTGTCCACATGAAAAAACATTACGAGAGTGGTGAGGGCAGTTCCAGTATGATCGACCAAGGTGAAGTTGAAGAGGAGATGCATGCGTGTGACTTATGTGGAGCGCAATACGAGGATGAAGAATCATTGAGAGCACATCGAGTGAGGCACCACGGAGAAGAGTCTGAGGAAGAAGAGGATGATGCTGAAGACGGGAACGTACCTATTCTACCCCCAGGCGAATTTACGTGTGGACAATGTGGGGATGGAGTAGCTACTCCTCGTGACCTGATTGCTCATCGCACTATGCATGCCACTCCTACTAAATTCTTCTGTAACATATGCAAAGTATATTTCGCCAGAGCTTTAGACCTCTCCTCGCATACAAGGGCTAGACACGCGGACAATGATAAAGTATTTTTTCCGTGCGCAATGTGCGATAGGTTCTACATGAACAAAAAGAGTTTACAACGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPPVLASKIKDCVSVEINENDELPTNVCRKCMDNVNNWHIFKNVCDRTQNKLLSLNSKDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDSENTSVANKIQTEGPPILASLGLTPRSDKGVESEKDEEEEQDEGLNEPQQMAKVPNMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTSHSFDRYTNKVNPKKSHSHLQPKLRPNPFNPKARLMPNPISHKMQFMSKNMPAKVPINKVIMPQKPIPIKSAKPQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPASPETLISEPEIASFQVETILSEPDTELYDQLQGDEDDEDVQNNHGQQYDTVDMNSENEIEIARQQGGEGDEQAEGNENVDQNLDNNMDGGHSDNDQDQTDLVDDTIESQENTEMEDSLEIKAEHDTKDGEDIQDERDHDETEVNHDGNDEDDEDIPIIQPVVEINEDMQNSFNTAAAEDDEIDETVDPNETLEDEEEAVKELDPNKTYVTKAQRDFIQKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQSKDIFNARSYACKLCPAKFQLKQFIMKHVLDTHEDGQSRVPLACVHCRARFKEKTMLKKHIRKGDCTVYVACDLCPETFKNMQQFSDHALAVHAGSFEADNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEETPHYCQHCDAKFEQAADLNKHIYMEHSDRTLGMPQNNEVDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICANSYSTPQKLSEHVQQSHPGIGALAASETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGETSTPSNKGFSPSIIGKPIKQVFPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEDDEFNLDENGAVLSTPQFDSFNFGNFANNVQQSQSQQDTMPYSCELCFKRFPLRNSLWKHKRAKHGIVNSGGNESQMPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTLEVTPDIEPDYDNDQESMDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQAPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVLDPVQIAKVSHTGPPVAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSLEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSSMIDQGEVEEEMHACDLCGAQYEDEESLRAHRVRHHGEESEEEEDDAEDGNVPILPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -