Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_948477245.1
Location
OX419745.1:11708239-11736262[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-15 7.1e-12 46.2 0.1 3 44 525 566 523 568 0.95

Sequence Information

Coding Sequence
ATGAAAGTGTTTATGGACATGAAACCGGGCGGCTCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGAACCCTTCGCGCAAGGACCTGAACGTGCAAATGATGATGGAGATAGAGTCGTCTCTGCTTAGCGCTGAGGTCATTCGTTCACCCTGTGTCTACATTCGGCCTGAAGTGGACAAATCGACGGCCAATAAAGTTAAAGATATCGTGGTCAATCATCAAGGGGAGATTTGTGAGGACGAAGAGGATGCGACACACGTCATATATCCTACAGTAGATCCTTTGGAGGAAGAATATGCTCGCCCGGTGTTTCGGCGTAACAATCACGTGCTAGTCCATTGGTATTACCTCCCCGACAGCCATGATACTTGGGCCCAAGCTGATCTGCCGGTGGATGCCCCAGAGACAGTCAGCTGGGAATGCACTCGCTCAGAACCTTGGCGCGTATCTGCGTCGTGGGCGTTAGATCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTATGAGGTCGACAATAATGGCAAGAAGAAGGTTCACAAACTGCGCCTATCGGTCGACGATTTGATTCCGGGAGCGGAGCCGTCCAGTAAGACGAAGAAAGGCAGCAAGAGGAAACGGTCCCCATCACCGCCGCCGCAGAAGCATAGCAAAAGGAAGAGTCGCACAGCAAAACGTCGTGACAACGATGTGGACGAGGAAGAAGACAACGCATCTCGGGATAATACTGATACTGTGCCCACACCGGAGAGTGAGAAAGCTCCCGAACCGGCACCAACGCCGGTGGCGCCACCTGTGGAGACAGCTCCTGCTTCGGAGGCACCAGCGACTCCCGCGCCTCCGCTAGACACACACGACGATTCGCAAGGCAAACACAGCGACTCCAACACTCAGGAAACATTAACGAAAGAGGAGCTTGAAGATAATGTAACAGACCAAACCCATCATATCGTAGTGCCGTCATATTCAGCTTGGTTTGACTACAACTCTATACACACTATAGAGAAACGAGCGCTTCCAGAGTTCTTCAACGGCAAGAACAAGTCTAAGACACCGGAGATTTATCTCGCGTATAGGAACTTCATGATCGACACGTACCGCCTAAATCCGACCGAGTACTTGACAAGCACGGCGTCTCGACGGAATCTAGCGGGAGATGTATGCGCAATAATGCGAGTCCATGGCTTCCTGGAACAATGGGGACTCATCAACTATCAGTTGGAGCCTGAATCTCGTCCCACGGCTATGGGACCACCTCCTACATCTCACTTCCATGTGCTTTCTGATACGCCTTCTGGGTTGCAAGCGCTCGTCACCAGACCCACACAGCCACGTCCTGCGGAGAACGTTCCGAAGGTGGAGCCAGGTCTGCCCAATGGCGCGGAGGCAGGTGCCGCCCCACCCCCTGCCGCTGCAGCAGCTCCGGCGCCCACCGCCGGCCCAGTTCCTGTCAAGCAGGAGCCAGCTCCTGTGGAACTACCCATTGCTTCTGGCTTGAAACTCGACCAGTATCGAGGCGGTGCCCGAGGTCGCGAATGGACCGAACAAGAGACGTTACTCCTGCTGGAAGCGTTAGAGCTGCACCGCGATGACTGGAATCGCGTTGCGGCCCACGTGGGTACCCGCACACAGGACGAGTGTATCCTGCACTTCATGCGTCTACCCATCGAGGAACCGTACCTACATGACCCTGCCGCTGGTGGAGTCCTCGGCCCTCTGGCGTATCAACCAATACCGTTTAGTAAGACTGGCAACCCTGTAATGAGCACTGTTGCATTCCTGGCGTCGGTGGTCGACCCTCGTATCGCCTCCAAGGCCACTAGGGCTGCCATGGACGAATTCGCTGCCATTAAGGACGAAGTGCCGGCCGCCATGATGGAAGCACACGTGAAAGCGGCAGGCGCTCACGGGCCAGCCGCTGCCCTCGCTGCCACTGGCATCGCTGGTACGGCGCCAGAATTGTCTCCTGCAGAAACGAAGAAAGAAGGTTCATCAGACATCAAGAACGAGCCTATGGAAGTGGAAGAAAGTCTGCCTAAGGTGAAAGACGAACCATTGGAAGCTGCACCCGCTGCCGAACCCGACAAAGAACCTAAGGAGGAACCCACAGCTCAAGTTAACAAAGAAGAAAAAGTGGAAGCCCCAGCGGCAGTAGACTCCAAGCTTCAGTCAGCTGCTGCAGCCGCCCTAGCAGCCGCGGCCGTGAAGGCAAAGCACCTCGCGGGTGTTGAGGAACGCAAGATCAAATCGCTCGTCGCCTTGCTGGTCGAGACGCAGATGAAGAAGCTGGAGATCAAGTTGAGACACTTCGAGGAGCTGGAAGCCACCATGGAGAGGGAACGAGAAGGTTTGGAATACCAGAGACAGCAGTTAATCCAAGAGCGGCAACAATTCCACCTGGAACAACTGAAGGCCGCTGAGTTCCGTGCCAGGCATCAAGCACATCAAAGGTTACAAGCGGAGAGCGGAGCGGCGGGCGCGGGCGCGGGAGCGATAGCGGCAAGCGCTAGCGTAAGCGGGGGCGGGAGCGTGAGCGCGCCGGTGGCAAGCGTGGCCGCCGCCGCGGTCCCCGCCGATGGGGCCCCGGAAGTGGCGCCTCCGCATGCGTAG
Protein Sequence
MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQNPSRKDLNVQMMMEIESSLLSAEVIRSPCVYIRPEVDKSTANKVKDIVVNHQGEICEDEEDATHVIYPTVDPLEEEYARPVFRRNNHVLVHWYYLPDSHDTWAQADLPVDAPETVSWECTRSEPWRVSASWALDLPQYNEWMNEEDYEVDNNGKKKVHKLRLSVDDLIPGAEPSSKTKKGSKRKRSPSPPPQKHSKRKSRTAKRRDNDVDEEEDNASRDNTDTVPTPESEKAPEPAPTPVAPPVETAPASEAPATPAPPLDTHDDSQGKHSDSNTQETLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEPESRPTAMGPPPTSHFHVLSDTPSGLQALVTRPTQPRPAENVPKVEPGLPNGAEAGAAPPPAAAAAPAPTAGPVPVKQEPAPVELPIASGLKLDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFMRLPIEEPYLHDPAAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPELSPAETKKEGSSDIKNEPMEVEESLPKVKDEPLEAAPAAEPDKEPKEEPTAQVNKEEKVEAPAAVDSKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAAGAGAGAIAASASVSGGGSVSAPVASVAAAAVPADGAPEVAPPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00040769;
90% Identity
iTF_00637607;
80% Identity
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