Basic Information

Insect: Thumatha senex
Gene Symbol: -
Assembly: GCA_948477245.1
Location: OX419741.1:22717375-22720113[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-08 5.4e-06 27.0 0.0 2 41 20 60 19 62 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-08	5.4e-06	27.0	0.0	2	41	20	60	19	62	0.93

Sequence Information

Coding Sequence: ATGCCTAAAAAAATAAACCGTAGAAAACTCGGGGCAAGGCCATATAAAAATTATAGTGAGGAAATGATGGCCCTGGCTATTGAAATGGTTAAAACAAAAAAAATGTCTTCTTACGAGGCCGAAAAAAATTTTGGAATACCACGTAGGACTATAGAAAAAAAAATAAAAAATCTCCATACAAATAAGCCTGGACCTCCATTTAAATTAACATTTGACGAAGAATTAAACTTTATCAAAGTGCTCATTGTGACCTCAGATTACGGTTCTCCTCTAACACAACTAGATTTTAGAATACTCGTTCATGAGTATTTAAAAAAAAATAACAGGACTGATACATTTGGCGATAAACTGCCTGGAGAATGGTGGGTAAAAAACTTTATTGAGCGACATCGGGATCAACTTAGTTTAAGAGCCGTACAAAACATTAAAAGAGCACGGGCAGAAAAATCATTATCCGATTTTGAAATGTATTTCAACAATCTTGAATCTGTATTAGAAAACGTGCCTGCAACTCACATTCTAAACTACGACGAGACAAATTTTAGCGATGACCCCGGCTCAGTCAAGTGTATATTCCGTCGTGGTTGCAAACATCCCGAACGCATTATAAATAGTACAAAAGGTTGCATATCAGTTATGTTTTCGGCTACAGCAAATGGAGATATACTGCCTCCATACGTAGTTTACAAGTCAGATGGTTTGTGGACGCAGTGGGTTCAAGGAGGTCCTGAACATGCTCGCTTTAATAGAACCAAAAGCGGTTGGTTTGATTCAACAACTTTTTTCGACTGGTTCTATACAATAATTGTGCCATGGGCACGCAGAATCGAAGGTTCAAAAGTTATCATTGGCGACAATCTTTCCAGTCATATTAATCCGGAAGTTATAGAGTTGTGCGATAAATATAATATTCGGTTCGTACTGCTCCCAGCTAACTCAACCCATCTGACTCAGCCACTGGATGTGGCATTTTTTGGTCCACTAAAAAAAGTGTGGCGCAAAATTTTAACCTCATATAAATATGACAATCCACGGCAAGCGGGACTCAATAAAGCGCATTTTCCACCTCTTCTTACAAAAGTGATGAAGGAGGTGAATATTAATAAAAAGGAAAACGTTATCAGTGGATTCAAAGCCACCGGTATAATGCCATTCAACCCTCAACAGGTTTACAAAAGAATTCCTGAATGTCTTCCTAATGAACCTAATTTTACTGTAGACAGGACATTATTAGATTATTTGAAGGAACACAGAAAACCAAATCAAATGATAAGAGGGAGAAACAAAAGACTTAATGTCCAACCTGGAAAATCCATCGCACCATCTGATCTCAGCCAAAATAAAGAAAACGACTGCAGTGCTGTGGATACCAAAGCAATTAAAACAGTTAGGCAGCGCAAACAGTCTCTTGGGACAAAATATAATAAAAAAAGTAAAAGCAAAGCTAAAAGATCTAAAAGATTAACAAGCGCATCAACTACCACCGAAGATATTGAGATGAGTATACACAGTGATTCTGATATAGGATGGGATGAGTTAGAGGATGATGACAGTTACATTATTACACAAGAACAATTAGAAAAGAAATTTGCAGAAAATAATATAGATGTTGAAAATAAAGTTGGTATAATTGAAAACAAAATACTATCAGATCTCAAGCCCAATAAAGAAATCAAAACACAACATACTCAGAAAATATTAAAGACACATGTAGAGAAGCAGACTGAAATAATGACTGATGTAATAATTGACGACCGCGTTGGCATAATTTCTGAAATTAATATACATGTTTGCGGTACTTTAAGCGACAACGAAGATTTTACTGAAAATTTTGTTATGGATACCGAAGAATTAACAACAGCCCAACAGCGCAAATTGTCTCTGAAAAACTGCAATAAAAAAAGTAACAAAAAGGCTAAGATATCAAAAATATTTTCGAGCGCATCAACTACTACTGAAGATATTGAGATGAGTACTCACAGCGAATGCAAGTTAGAAGATAATGACTGTTACATTTTGCCACAAGAACCATCAGACCAAGATGCTATTGATGTTAAAAGAAAAGTTGAAATGATAGAAAGCGAAATATTCAAAGAAATTATTAAAAGAGATCTTGAATCAAAAGAATATGAAATGAAAGATGTAAAAAAAGAGGAAGATATTGGGCAAAAAATAATATATTTGACTGATGATTTTCCACTTTTAGATAAGTGTTTAGAACATTACAAATTAAACTCATGCGAGGGTTATAGTATTCTATCGGAAAAGGCTGAAATGAAGAAATTCATTGACAAATCTCAGCCAGAACAAAAAGAAATAAAAAGTAAAGGAATGTTTAGTAAAGAGACAGAGACTGAAACAAGAAATCAAAAGAAAGTAGAGGATGAAGACGAACTGGATAAAGGACGGGTTGACACTATAAAAGAAAGGGTAGAGGAACGTAAAATTGAATGGGATGAAGGAGATACAATTTTATGCAGATATTATATACGTAGTAGATGGCAATATTATGTCGGCGTTATAAAAAATATCAACAGAAATAAAAGCATTTATATAATTTCATATTACAAGACTATAAAAACCCGTGGTAATATTAAATTTGTTATACCAAAGAGGTTGGATCAAGATTCATCTTTGCCAGAAAATTCTATAGTGAAATCTATAGAATTATTGCAAATATCGGAATACCCTGAAGAGTATACTCTCATGAACGACAACGATGAAGTTTATTTTGTTTGA
Protein Sequence: MPKKINRRKLGARPYKNYSEEMMALAIEMVKTKKMSSYEAEKNFGIPRRTIEKKIKNLHTNKPGPPFKLTFDEELNFIKVLIVTSDYGSPLTQLDFRILVHEYLKKNNRTDTFGDKLPGEWWVKNFIERHRDQLSLRAVQNIKRARAEKSLSDFEMYFNNLESVLENVPATHILNYDETNFSDDPGSVKCIFRRGCKHPERIINSTKGCISVMFSATANGDILPPYVVYKSDGLWTQWVQGGPEHARFNRTKSGWFDSTTFFDWFYTIIVPWARRIEGSKVIIGDNLSSHINPEVIELCDKYNIRFVLLPANSTHLTQPLDVAFFGPLKKVWRKILTSYKYDNPRQAGLNKAHFPPLLTKVMKEVNINKKENVISGFKATGIMPFNPQQVYKRIPECLPNEPNFTVDRTLLDYLKEHRKPNQMIRGRNKRLNVQPGKSIAPSDLSQNKENDCSAVDTKAIKTVRQRKQSLGTKYNKKSKSKAKRSKRLTSASTTTEDIEMSIHSDSDIGWDELEDDDSYIITQEQLEKKFAENNIDVENKVGIIENKILSDLKPNKEIKTQHTQKILKTHVEKQTEIMTDVIIDDRVGIISEINIHVCGTLSDNEDFTENFVMDTEELTTAQQRKLSLKNCNKKSNKKAKISKIFSSASTTTEDIEMSTHSECKLEDNDCYILPQEPSDQDAIDVKRKVEMIESEIFKEIIKRDLESKEYEMKDVKKEEDIGQKIIYLTDDFPLLDKCLEHYKLNSCEGYSILSEKAEMKKFIDKSQPEQKEIKSKGMFSKETETETRNQKKVEDEDELDKGRVDTIKERVEERKIEWDEGDTILCRYYIRSRWQYYVGVIKNINRNKSIYIISYYKTIKTRGNIKFVIPKRLDQDSSLPENSIVKSIELLQISEYPEEYTLMNDNDEVYFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01436036;
90% Identity: iTF_01436017;
80% Identity: -