Tsen020365.1
Basic Information
- Insect
- Thumatha senex
- Gene Symbol
- -
- Assembly
- GCA_948477245.1
- Location
- OX419732.1:22336440-22339178[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-09 1.2e-06 29.1 0.0 2 41 20 60 19 62 0.93
Sequence Information
- Coding Sequence
- ATGCCTAAAAAAATAAACCGTAGAAAACTCGGGGCAAGGCCATATAAAAATTATAGTGAGGAAATGATGGCCCTGGCTATTGAAATGGTTAAAACAAAAAAAATGTCTTCTTACGAGGCCGAAAAAAATTTTGGAATACCACGTAGGACTCTAGAAAAAAAAATAAAAAATCTCCATACAAATAAGCCTGGACCTCCATTTAAATTAACATTTGACGAAGAATTAAACTTTATCAAAGTGCTCATTGTGACCTCAGATTACGGTTCTCCTCTAACACAACTAGATTTTAGAATACTCGTTCATGAGTATTTAAAAAAAAATAACAGGACTGATACATTTGGCGATAAACTGCCTGGAGAATGGTGGGTAAAAAACTTTATTGAGCGACATCGGGATCAACTTAGTTTAAGAGCCGTACAAAACATTAAAAGAGCACGGGCAGAAAAATCATTATCCGATTTTGAAATGTATTTCAACAATCTTGAATCTGTATTAGAAAACGTGCCTGCAACTCACATTCTAAACTACGACGAGACAAATTTTAGCGATGACCCCGGCTCAGTCAAGTGTATATTCCGTCGTGGTTGCAAACATCCCGAACGCATTATAAATAGTACAAAAGGTTGCATATCAGTTATGTTTTCGGCTACAGCAAATGGAGATATACTGCCTCCATACGTAGTTTACAAGTCAGATGGTTTGTGGACGCAGTGGGTTCAAGGAGGTCCTGAACATGCTCGCTTTAATAGAACCAAAAGCGGTTGGTTTGATTCAACAACTTTTTTCGACTGGTTCTATACAATAATTGTGCCATGGGCACGCAGAATCGAAGGTTCAAAAGTTATCATTGGCGACAATCTTTCCAGTCATATTAATCCGGAAGTTATAGAGTTGTGCGATAAATATAATATTCGGTTCGTACTGCTCCCAGCTAACTCAACCCATCTGACTCAGCCACTGGATGTGGCATTTTTTGGTCCACTAAAAAAAGTGTGGCGCAAAATTTTAACCTCAAATAAATATGACAATCCACGGCAAGCGGGACTCAATAAAGCGCATTTTCCACCTCTTCTTACAAAAGTGATGAAGGAGGTGAATATTAATAAAAAGGAAAACGTTATCAGTGGATTCAAAGCCACCGGTATAATGCCATTCAACCCTCAACAGGTTTACAAAAGAATTCCTGAATGTCTTCCTAATGAACCTAATTTTACTGTAGACAGGACATTATTAGATTATTTGAAGGAACACAGAAAACCAAATCAAATGATAAGAGGGAGAAACAAAAGACTTAATGTCCAACCTGGAAAATCCATCGCACCATCTGATCTCAGCCAAAATAAAGAAAACGACTGCAGTGCTGTGGATACCAAAGCAATTAAAACAGTTAGGCAGCGCAAACGGTCTCTTGGGACAAAATATAATAAAAAAAGTAAAAGCAAAGCTAAAAGATCTAAAAGATTAACAAGCGCATCAACTACCACCGAAGATATTAAGATGAGTATACACAGTGATTCTGATATAGGATGGGATGAGTTAGAGGATGATGACAGTTACATTATTACACAAGAACAATTAGAAAAGAAATTTGCAGAAAATAATATAGATGTTGAAAATAAAGTTGGTATAATTGAAAACAAAATACTATCAGATCTCAAGCCCAATAAAGAAATCAAAACACAACATACTCAGAAAATATTAAAGACACATGTAGAGAAGCAGACTGAAATAATGACTGATGTAATAATTGACGACCGCGTTGGCAAAATTTCTGAAATTAATATACATGTTTGCGGTACTTTAAGCGACAACGAAGATTTTACTGAAAATTTTGTTATGGATACCGAAGAATTAACAACAGCCCAACAGCGCAAATTGTCTCTGAAAAACTGCAATAAAAAAAGTAACAAAAAGGCTAAGATATCAAAAATATTTTCGAGCGCATCAACTACTAATGAAGATATTGAGATGAGTACTCACAGCGAATGCGAGTTAGAAGATAATGACTGTTACATTTTGCCACAAGAACCATCAGACCAAGATGCTATTGATGTTAAAAGAAAAGTTGAAATGATAGAAAGCGAAATATTCAAAGAAATTATTAAAAGAGATCTTGAATCAAAAGAATATGAAATGAAAGATGTAAAAAAAGAGGAAGATATTGGGCAAAAAATAATATATTTGACTGATGATTTTCCACTTTTAGATAAGTGTTTAGAACATTACAAATTAAACTCATGCGAGGGTTATAGTATTCTATCGGAAAAGGCTGAAATGAAGAAATTCATTGACAAATCTCAGCCAGAACAAAAAGAAATAAAAAGTAAAGGAATGTTTAGTAAAGAGACAGAGACTGAAACAAGAAATCAAAAGAAAGTAGAGGATGAAGACGAACTGGATAAAGGACGGGTTGACACTATAAAAGAAAGGGTAGAGGAACGTAAAATTGAATGGGATGAAGGAGATACAATTTTATGCAGATATTATATACGTAGTAGATGGCAATATTATGTCGGCGTTATAAAAAATATCAACAGAAATAAAAGCATTTATATAATTTCATATTACAAGACTATAAAAACCCGTGGTAATATTAAATTTGTTATACCAAAGAGGTTGGATCAAGATTCATCTTTGCCAGAAAATTCTATAGTGAAATCTATAGAATTATTGCAAATATCGGAATACCCTGAAGAGTATACTCTCATGAACGACAACGATGAAGTTTATTTTGTTTGA
- Protein Sequence
- MPKKINRRKLGARPYKNYSEEMMALAIEMVKTKKMSSYEAEKNFGIPRRTLEKKIKNLHTNKPGPPFKLTFDEELNFIKVLIVTSDYGSPLTQLDFRILVHEYLKKNNRTDTFGDKLPGEWWVKNFIERHRDQLSLRAVQNIKRARAEKSLSDFEMYFNNLESVLENVPATHILNYDETNFSDDPGSVKCIFRRGCKHPERIINSTKGCISVMFSATANGDILPPYVVYKSDGLWTQWVQGGPEHARFNRTKSGWFDSTTFFDWFYTIIVPWARRIEGSKVIIGDNLSSHINPEVIELCDKYNIRFVLLPANSTHLTQPLDVAFFGPLKKVWRKILTSNKYDNPRQAGLNKAHFPPLLTKVMKEVNINKKENVISGFKATGIMPFNPQQVYKRIPECLPNEPNFTVDRTLLDYLKEHRKPNQMIRGRNKRLNVQPGKSIAPSDLSQNKENDCSAVDTKAIKTVRQRKRSLGTKYNKKSKSKAKRSKRLTSASTTTEDIKMSIHSDSDIGWDELEDDDSYIITQEQLEKKFAENNIDVENKVGIIENKILSDLKPNKEIKTQHTQKILKTHVEKQTEIMTDVIIDDRVGKISEINIHVCGTLSDNEDFTENFVMDTEELTTAQQRKLSLKNCNKKSNKKAKISKIFSSASTTNEDIEMSTHSECELEDNDCYILPQEPSDQDAIDVKRKVEMIESEIFKEIIKRDLESKEYEMKDVKKEEDIGQKIIYLTDDFPLLDKCLEHYKLNSCEGYSILSEKAEMKKFIDKSQPEQKEIKSKGMFSKETETETRNQKKVEDEDELDKGRVDTIKERVEERKIEWDEGDTILCRYYIRSRWQYYVGVIKNINRNKSIYIISYYKTIKTRGNIKFVIPKRLDQDSSLPENSIVKSIELLQISEYPEEYTLMNDNDEVYFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01436036;
- 90% Identity
- iTF_01436017;
- 80% Identity
- -