Tsen012118.1
Basic Information
- Insect
- Thumatha senex
- Gene Symbol
- -
- Assembly
- GCA_948477245.1
- Location
- OX419739.1:4379461-4381449[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-10 2.7e-07 31.2 0.1 2 43 16 58 15 60 0.90
Sequence Information
- Coding Sequence
- ATGGTGAAGAATTATAAAAGAAAGACGGAGAGAGGGAATTGGAATGAAGAAAGTATGAAAAATGCGGTAAATATGGTCATTGAAGGGAAAATGGGGTATAAGGTAGCATCAAAAACATTTTCTGTGCCACAATCTACCCTAGAAAGAAAAGTAAAAGCAGCTCGTGAAGCCCTAAAACATCCTGCTGCTCCTGCATCGATTAAAGTACCTTTAGGCCCAAAAAAACGAATATTTTCGGAAGAAGAAGAGAACGAACTTTGCAACTATATTTTGGATATGGAAAGTCGTCTCTATGGACTTACAACCAAAGATTTAAGAGTGTTGGCATACACTTTGGCAGTGAAAAATGGGAAGAAACATATGTTTAACTGTGACAAAGGAGTAGCTGGCAAAGATTGGCTTCAGGGATTTTTAAGCAGGCACCCAGAACTATCGATAAGAAAACCAGAAAGCACTTCAGCTGCACGTGCCGCTGGGTTTAATAAGCAGGCTGTTGAACAGTTTTTTAACTTCCTTGGTAATGTTTATGATGAACATAAACTTCCACCGGACAGAATTTATAACTGTGATGAAACAGGAATTTCAGTGGTGCCTAAAACAAGGTCAAAAATAATTGCACGAAAAGGCAGAAAACAAGTGGGATCTATTACTTCTGCGGATAGAGGTACTACAATAACTATTGAAATATGTTTCAGTGCTAGTGGCCAATACATGCCTCCAATGATGGTGTATCCAAGAAAGAGAATGGACCCGCAGCTAATGCTGAATGCTGCTCCTGGAGCGTGGGGTGTTTGCAGTGATTCTGGATGGATGACAGCTGAGTTATTCCTTGGCTGGTTTAAGAAATTCATTGAATTTAGTGGGGCCAGGCCTGATCGACCTGTGCTTTTGTTGTTAGACGGCCACAGCACTCACACACAGAACCTTGACGTCATCAATGAAGCTCGTTCTAATGGAGTTATTATATTATGTTTCCCCCCACATACGACTCATCGACTTCAAGTCGCTGACGTAGCATACATGAAACCCTTGAGCACATATTACGATCAACAAATCACAGCCTGGCTTCGGAGTAACTCAGGTATGGTGGTAACTCCCCGGCAAGTGGCAGAGATTTTTGGCAAAGCGTTTGTCCAGGCTTCTACAATGGCAACGGCGGTTAATGGCTTCAAAAAATGTGGGATTTGGCCATACGACCCAACAGTTTTTTCGGATATTGATTTTGCCCCTTCATTAGCGACAGATATTCCACAAACAGAGAGAGTATCTATCACTGAAGCATTTCAAAAAGCATCTACGCAGGACAACGAAGCAACAGCTCTAAATAGATCGTTGATATCAACTGACGCTTCAGTTGTGCCTGAAACGACAATAAATGCAACAACACGTGCAAAGATAACTTCAGATGCGACAGTTGAAGTATCTGATAAAGCAATTATGGACAAACCACTGATGATTGAGGCAGAGCCTGAACCCGGATGCTCCTCATGGATAAACAATATCGGAATAGACCAAAGACCAACTACTCCATCATCAGTATTTTCTGTTGTTAGTCCTCAACAAGTGATGCCTTATCCTGCAACCCGGAAAATTTCACGCGTGACAAGGAAACGAGGAAAAACAGCTATCATAACTTCTTCTCCGTACAAAAATGAATTGGAAGAATCAATCGAAAAAAAGAGACTGGTAGAAGATAGCAAAAAGAGAAGAAAAGATGCAAGAGAACAAAAAAAATACAAGAAAACCAAATTGACTAAAAAGAAGAAAACTACTATTAATAAGAAGAATAAAAAGAATCACACTTCACCAGAATATGATGAAGAGGAAAATAATATCCCTTGTTTTTACTGCACCGGAAGATACATGGAATCAAATGAAGGTTGGGTCGCGTGTTCCCTCTGTGGGAATTGGGCACATTGTAGCTGTGCTGGGGTAGATGACGAGGACGACGAGGCAGTATTTATTTGCGAGTATTGTAATCAACATTAA
- Protein Sequence
- MVKNYKRKTERGNWNEESMKNAVNMVIEGKMGYKVASKTFSVPQSTLERKVKAAREALKHPAAPASIKVPLGPKKRIFSEEEENELCNYILDMESRLYGLTTKDLRVLAYTLAVKNGKKHMFNCDKGVAGKDWLQGFLSRHPELSIRKPESTSAARAAGFNKQAVEQFFNFLGNVYDEHKLPPDRIYNCDETGISVVPKTRSKIIARKGRKQVGSITSADRGTTITIEICFSASGQYMPPMMVYPRKRMDPQLMLNAAPGAWGVCSDSGWMTAELFLGWFKKFIEFSGARPDRPVLLLLDGHSTHTQNLDVINEARSNGVIILCFPPHTTHRLQVADVAYMKPLSTYYDQQITAWLRSNSGMVVTPRQVAEIFGKAFVQASTMATAVNGFKKCGIWPYDPTVFSDIDFAPSLATDIPQTERVSITEAFQKASTQDNEATALNRSLISTDASVVPETTINATTRAKITSDATVEVSDKAIMDKPLMIEAEPEPGCSSWINNIGIDQRPTTPSSVFSVVSPQQVMPYPATRKISRVTRKRGKTAIITSSPYKNELEESIEKKRLVEDSKKRRKDAREQKKYKKTKLTKKKKTTINKKNKKNHTSPEYDEEENNIPCFYCTGRYMESNEGWVACSLCGNWAHCSCAGVDDEDDEAVFICEYCNQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114041;
- 90% Identity
- iTF_00114041;