Tsen010732.1
Basic Information
- Insect
- Thumatha senex
- Gene Symbol
- -
- Assembly
- GCA_948477245.1
- Location
- OX419737.1:25948777-25969589[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.8e-12 5.3e-09 36.6 0.0 1 39 146 185 146 189 0.90 2 4 7.8e-11 4.2e-08 33.7 0.3 2 39 201 238 200 242 0.92 3 4 2.8e-15 1.5e-12 48.0 0.2 2 45 256 300 255 300 0.96 4 4 1.4e-17 7.4e-15 55.4 0.0 1 42 307 349 307 351 0.95
Sequence Information
- Coding Sequence
- ATGCCTGGCCATGGACTTTCTGAAGTGAAAAGCGAGCCGCTGTCTGACGAGGAGGATAGTGACACACAGTTCGCGCGCAATTATTTGTCTAGTCAGGGTAGCGGTCTGGAAGAACTGGCACCTTTGGCGCCAGCAGGCCCGGCGGCTACACCGGTGTGCGTCAAACAAGAATGTGCTTCCCCTGCTGCGACCCTGGAGACTCTCGAGTCTGCATCACATCATGCCAAGATCCAGATATCATCATCAATCCTGGACCACCGCCTATCAGTAATGAACGTCGGTGAATTGTTGGACTCCAGAGGTTATTCGCCACTGTTAGCAGTTAAAGATGAGCCCATATCCGAAGGAGAACAACCACATCTCAGCGGCGAAGACACGAGCGACTCTTGTGGTAGACAAATGTCACCGACATCTCGCAACAGTCCCAAGAGCTGGACACACCAAGACATGGAAAAAGCACTGGATGCCTTGCGTAAACACCAGATGAGTCTTACGAAGGCATCGGCTACCTACGGCATCCCGTCAACCACACTCTGGCAGCGTGCGCATCGTCTGGGCATCGACACGCCGAAGAAGGAGGGCGCCACCAAGACGTGGAGTGAAGCCGATTTGCGCGGAGCACTGCATGCCCTGAGGGCGGGGGCTATATCCGCCAACAAGGCCAGCAAGGCTTACGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGACGCGAGGGCATCCGCCTGTCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGGCGACCTGGCGCGCGCGCTGGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCCACCTACGGCATACCCACCGGCACGCTGTACGGGCGGTGCAAGCGAGAAGGCATCGAGCTTTCCCGCTCCAACCCAACGCCCTGGTCCGAAGACGCTATGGGAGAGGCATTGGAAGCAGTAAGAGTGGGCCAAATGTCCATAAACCAGGCGGCGATACATTTCAACCTGCCTTACTCGTCACTGTACGGCAGGTTCAAGAGATGCAGGTACCAAATGCAGGGTATCGCTGATACTCAGCTCCAACAACAAGACATTCAGAAGCCGGACCTGGACATCCGACAACACGATACACAACATTACTACTATCAGCCGCCCTCTATACTCGACCAAGTTACGCCAACATACACCAACTTACAAGAATACCCTTGCAATGTTCCAACGCACGACCAATACGGCCAATATTACCAATGCTTTAGCAGTATAGCCACGAGCTGA
- Protein Sequence
- MPGHGLSEVKSEPLSDEEDSDTQFARNYLSSQGSGLEELAPLAPAGPAATPVCVKQECASPAATLETLESASHHAKIQISSSILDHRLSVMNVGELLDSRGYSPLLAVKDEPISEGEQPHLSGEDTSDSCGRQMSPTSRNSPKSWTHQDMEKALDALRKHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGATKTWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRGDLARALAAIRAGAASVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCRYQMQGIADTQLQQQDIQKPDLDIRQHDTQHYYYQPPSILDQVTPTYTNLQEYPCNVPTHDQYGQYYQCFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -