Tpal006943.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- Zmiz1
- Assembly
- GCA_012932325.1
- Location
- NW:8347115-8375645[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.19 9e+02 -0.6 0.9 4 24 925 945 922 950 0.88 2 2 4.9e-26 2.3e-22 78.2 4.8 1 50 1010 1059 1010 1059 0.98
Sequence Information
- Coding Sequence
- ATGCTGGGATACAGCCCATCGTACAGGGAGTGGCCGGGTCCatccggccctgctggccccacGGGCCCTGCTGGGGCGCCCCAGCAGCTTTCCGTGGTGACGTCGGTGTGGGGCAACCCCGGCGGGGTGTCTTccggcaacgccggcaacgcgggCAACGCGGGCAGCGGCGTCGGCACCAAGCAGACGGCCTgcaccaccgcccccaccacggcggcgaccaccaccaccaccactagtTCGGCTCAGTTCCACAACGTGTACCGGCAGACGCCCCCGACCAACGGCGTACCTGGTGCCTCTGGACCAAGGGCTCGGCCTTCTgtccgcagggcggcgggggcgggctatGGTCCTTCGGGTGgaggcgccgtcggcgtccccgggggcgtgggcgtccctggggcgggcccggggagctccggcgggccggcgggggtggggcagaTGAGCGCGGGGGTTGGcacccccggccagcccccatCTGGGGCCAGCGAcgccccgcagcagcccagcagcgcctctcagcccggccagggcggcgcgggcacgcagtcccagcagcagccccagcaacAAGCCCAGCAAGGGCAGCCCCAGCAACAGGCCCAGCAaggccagcagccaggccagcagcagcagggccagcagcagccctcgcagcccggccagcagcaggcgtACTCGTCGTCGGGGATGGTGGCCACCAACACGGCCACCTCCACAGCCTCCGGCATGCAGCACGACGGCAGCGGCCAGTTCAACCAGATGGGCCATGGcatgcagcagggcggcccgggccagtaCTACGGCGGCCGCAACCACATGGGCATGGGCATGAACGGCATGAGCCCCATGAACTCCATGAGCCAGATGGGCATGATGGGCCAGCACGCTCAGCATGCCCAGCACGGCAATATGATGGGCGGCATGGGCGGTATGGGCAACATGTCTCCCGGCATGGGCCCCAACATGAACAACATGGGCCACATGGGCATGGGCCCCAACGGCAACATGAACCACATGAACATGAACATGAACAACATGGGCATGGCGCCGAACATGGGCAACATGGGCCAGATGAACAGCATGGGGCCCGGCAGCATGAACAAGATGGGCATGCAGAACCAGATGTACCCCCGGAGGCTGGCGCCGTACCCGAGTCCAGCGCTCCACATGTCGCAGAAAAGACCCGCCGCCTACCCCACCGGCCAGCAGTACCCTGGCTACACCAACAGGCCCAACTTCCAAGGACAGTACCCCCAGCAGGCCATGGGCCCTGGCGGCAACATGGCCGGTAGCATGGGTCCCGGTGCCAACATGGGTGCGAACATGGGCCCCGCAGGGGGCATGGGCCCCACTGGAGGCATGGGCCCCGCTGGAGGCATGGGCCCCACTAGTGGAATGGGTCCTTCAGGAGGCATGGGTCCCTCTGGGGGCATGGGCCCAGCCGGGGCAATGGGACCTTCTGGTGGCATGGGTCCTAATGCAGGCATGGGGCCCAACACTGGCATGGGTCCCTCCGGAGCGATGGGTCCAACCGGAGGCATGGGCCCCACCGGAGGTATGGGCCCTGCCGGGGGCATGGGACCCAACGGGTCCTTCCCTaccgcgggcgggcgcggtgccATGAGGCAGTCCACGCCGCCCTACACTGCCGCTAGTCAAGGAGGCCACCAGTACTTTAGCAGTGGCAGCAGCAACCTCCCGGGCAACATGCCCAGCAACATGGCGGGCAGCATGCCGGGCAACATGTCGAACAGCATGGCCGGCAACATGCCCAGTGGCATGGCCGGCAACATGTCGGGCAACATGTCGGGGGCTATGGCCGGCGGCATGACCAACAGCATGTCCAGCAGCATGCCGGGCAACATGAGCAGCTCCATGGGAAGCAACATGTCCAGCAGCATGCCGGGTAACATGCCCAGCAACATGGGGAACAGCATACCTGGCAGCATGCCTGGCAGCATGGCGGGCAGCATGCCCGGTGCCATGTCTGGCAACATGCAAGGACCCATGGCCACCTCCATGCCCAGCCACCACAACGGCAGCAACTGTCAGCCCTTCTCCAACCACCACCAAGgacccggcgggccgggcggctacGGTGGCTCAGGCGGTGGCAGCGCTTCAAGTGGTGCGGGTGCAGGAGGAGTGGGGCCTGGACCCTacgccggcggggtgggccctggaggccctgtaGGCCCTGTAGGCTCGGGAGCAATGAGTTACCAAGGGAATGCTGCGGCCAACAGCCCCAGCGTCGGCGTCGGCTCCGCAGCGGGGTCCGTTCAGGGCCCCGGCACGACTACGGGGGGCCCCGGACCCGGACCGTACACCTCCGGGTCAGGGACTATGAGTTACCAGCATAGTCCGATCCCCGGCAACCCCACACCACCTCTGACGCCTCAGCACCCGGGCTCCATGCCCTACGCTAGTCCGGGCGGTGGGGACGTCAAGCCAGCGCTACCTATCCAAAAAGACGACGAATTGAGGCTGACATTCCCTGTACGGGATGGCATAATTCTTCCTCCTTTCCGACTGGAGCATAATCTTGCTGTGAGCAATCATGTTTTCCAATTAAAACCCACCGTTCATCAAACCCTCATGTGGAGGTCAGATTTAGAATTACAATTAAAGTGCTTCCACCATGAAGATCGGCAAATGAATACCAACTGGCCAGCCAGTGTGCAGGTGTCAGTTAATGCTACACCTCTCTCAATTGACAGAGGTGAAAATAAAACCAGTCACAAACCCCTGTACCTAAAAGAAGTCTGCCAGCCTGGAAGAAACACAATACAAATTACAGTTTCTGCATGCTGTTGTTCCCATCTCTTTGTCTTGCAATTAGTTCACAGGCCTAGTGTACGAAGTGTACTCCAAGGTCTACTTAGGAAACGATTACTTACAGCAGATCACTGCATcaataaaattaaaagaaaTTTCACCAGCGGTGGTGGTGCAACGGGAACAGGATCTGGTACTATATGCTCTGATAGAGACGGTGTTGAACAAACAGCTCTGAAGGTATCATTAAAGTGTCCTATCACATTCAAACGTATCACTCTACCTGCTCGTGGCCATGACTGCAAGCACATTCAATGTTTTGATCTCGAATCCTATTTACAAATGAATTGTGAACGTGGTTCATGGAGATGTCCTGTGTGCAATAAACCAGCACAACTGGAAGGGCTAGAAGTTGATCAATACATGTGGGGTATTCTAAATACTCTCAATTCCTCTGAGGTGGATGAGGTCACCATAGATTCAGCTGCTAACTGGAAACCTACCAAGAACTTACAACCTGGCATAAAGGCTGAGGATGGGGAGAATGACACATGTGGTGCTAAACGACTCAGCAAGGCTGTATCACCAAGCAGTATGACATTGCCCACCATGAATAATTGGGATACCACTCAAGCCATGTCACCTTATATTCCACCTGACATGAATAGTATAGCAAGTGGATCAATGATGAGCAATAACACATCTTTCAATAATAGCAATATGCAaagaggaggaggcggccctGCATCCAATAGTGGTCCTGGCAGCAATTCATATGACTTCCCTGGTAGTGGGTCAAACAACCAAGGTAGTAATGATTACAATAGCCCAGGTGGCCCACTATCACACCTAAGTGAATCTGTGAACTCTCTAGACCCCTTAAATGCAATGGAAAAGAGTTTAAGTGAACAGATGCCACACACTCCTCACACCCCACATACTCCTCATACACCTCACACTCCCAATGGTCCACCCAGTGTACCACCACCTGGATCAGTCGATAACACCTCTAGCACAGCAAATAATAGCGCCAATAATTCTGCAACAACCCTCACAGATGCTGATATTCCATCAGATCTTAACTTTGACCCAGCAGCAGTCATAGATGGTGAAGGAACAGGCCAGGAAGCATTGAATCTCCTCCCTGATAGTATGGTGGATCCTATGGAGCTTTTGTCATACTTGGACCCACCTGACCTGGCAACACCACCATCTTCTGGGGCCAGTAGTAACGGCAACAATGTCAACACCACCTCTGATGATATTCTGGCGCTATTCGAGTAG
- Protein Sequence
- MLGYSPSYREWPGPSGPAGPTGPAGAPQQLSVVTSVWGNPGGVSSGNAGNAGNAGSGVGTKQTACTTAPTTAATTTTTTSSAQFHNVYRQTPPTNGVPGASGPRARPSVRRAAGAGYGPSGGGAVGVPGGVGVPGAGPGSSGGPAGVGQMSAGVGTPGQPPSGASDAPQQPSSASQPGQGGAGTQSQQQPQQQAQQGQPQQQAQQGQQPGQQQQGQQQPSQPGQQQAYSSSGMVATNTATSTASGMQHDGSGQFNQMGHGMQQGGPGQYYGGRNHMGMGMNGMSPMNSMSQMGMMGQHAQHAQHGNMMGGMGGMGNMSPGMGPNMNNMGHMGMGPNGNMNHMNMNMNNMGMAPNMGNMGQMNSMGPGSMNKMGMQNQMYPRRLAPYPSPALHMSQKRPAAYPTGQQYPGYTNRPNFQGQYPQQAMGPGGNMAGSMGPGANMGANMGPAGGMGPTGGMGPAGGMGPTSGMGPSGGMGPSGGMGPAGAMGPSGGMGPNAGMGPNTGMGPSGAMGPTGGMGPTGGMGPAGGMGPNGSFPTAGGRGAMRQSTPPYTAASQGGHQYFSSGSSNLPGNMPSNMAGSMPGNMSNSMAGNMPSGMAGNMSGNMSGAMAGGMTNSMSSSMPGNMSSSMGSNMSSSMPGNMPSNMGNSIPGSMPGSMAGSMPGAMSGNMQGPMATSMPSHHNGSNCQPFSNHHQGPGGPGGYGGSGGGSASSGAGAGGVGPGPYAGGVGPGGPVGPVGSGAMSYQGNAAANSPSVGVGSAAGSVQGPGTTTGGPGPGPYTSGSGTMSYQHSPIPGNPTPPLTPQHPGSMPYASPGGGDVKPALPIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCINKIKRNFTSGGGATGTGSGTICSDRDGVEQTALKVSLKCPITFKRITLPARGHDCKHIQCFDLESYLQMNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSEVDEVTIDSAANWKPTKNLQPGIKAEDGENDTCGAKRLSKAVSPSSMTLPTMNNWDTTQAMSPYIPPDMNSIASGSMMSNNTSFNNSNMQRGGGGPASNSGPGSNSYDFPGSGSNNQGSNDYNSPGGPLSHLSESVNSLDPLNAMEKSLSEQMPHTPHTPHTPHTPHTPNGPPSVPPPGSVDNTSSTANNSANNSATTLTDADIPSDLNFDPAAVIDGEGTGQEALNLLPDSMVDPMELLSYLDPPDLATPPSSGASSNGNNVNTTSDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -