Tpal007393.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- pnr
- Assembly
- GCA_012932325.1
- Location
- NW:1104939-1136710[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 4e-14 51.6 3.2 1 34 177 209 177 211 0.97 2 2 6e-19 1.2e-15 56.4 6.2 1 35 243 276 243 277 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAGACCGGCAGCTGCGCGGTCAACTCCGACATGTATCCGGAGTCAACATCCACCGGGACAACGGGGTAcctgcagcaacagcagcaacagcaacaacagcagcagtcgcagcaccagcaccagcagcaccaccaacaccaccaacaccaccaACAGCACGAGCAGCACGCGCACCAACAACAAGACGCCCAACAGCCTGTGTACGTGCCTTCGACGAGAGCCGTGTTGCCCCCGCAgtacggcggcgcgggggtggggtccACGGGGGCGTGGGGCTCGTCGTGGGGCGGCCACCAGTCGGGGCACGACGGCTACGTGTCGCAGTACCAGCACCACACGGCCCACCACGCGGCCCACCACgcggcccaccacgccgcccaccacgccctgtACGCGCAGAACATGATGATGAACCCCTGGCGGGCctacgacggcgcggccttcCAACGAGCGTCGCCCTACGCGTGGCGTTGTTCCCCTCCAGACGGCTCCATGGACTTCCAGttcggcgagggccgcgagtgcgtcaactgcggcgccgtgtccacgccgctgtggcgccgcgacggcacggGGCACTACCTGTGCAACGCGTGCGGCCTGTACCACAAGATGAACGGCATGAACAGGCCGCTGGTCAAGCCGTCCAAGAGACTCGTCAACGAAGTCAGCAACCTCTGCCATCCACTCGAGacggcgacgcggcgcctggGGCTGTGCTGCACCAACTGCGGCACGCGCACCACGACACTGTGGCGGCGCAACAACGAGGGCGAGCCGGTGTGCAACGCGTGCGGGCTGTACTTCAAGCTGCACGGCGTCAACAGGCCCATCAGCATGCGCAAGGACGGCATCCAGACGCGGAAGCGCAAGCCCAAGAAGCAGCAGGGCGGCTCCGGCTCCACCtcctccacgaccaccacctccacgtcggcgtcgtcgccgctgtcgcagtcctcggccgcctccagcgacaCCAAGCACTCGGGCGGCGACAAGCTGTCGTCCTCCCCGGACCAAGGCGGTAAAAAGCGCGCCGACGGAGTCATCACCGCCATGTACCAGGCGGCGCACCACCCCATCAAATCCGAGCccctggggctggggggcgcGCTCGGGGGCGGCTTGGGGTCGCTGGGGCCGCTCGGCTCCATCGCCCCCAACGTCGGCTACCCCGGCACCCACGGCCCcttcgcggcggcgcagcagttCGGCCTCCCTGGCCACCACCACGCGTCCTCGTCACCCCCCGACtacgcccaccaccaccatcaccacagTCACCATAGTCACCACCACAGCAAGCTCATGGCGTCGTCGTGA
- Protein Sequence
- MFQTGSCAVNSDMYPESTSTGTTGYLQQQQQQQQQQQSQHQHQQHHQHHQHHQQHEQHAHQQQDAQQPVYVPSTRAVLPPQYGGAGVGSTGAWGSSWGGHQSGHDGYVSQYQHHTAHHAAHHAAHHAAHHALYAQNMMMNPWRAYDGAAFQRASPYAWRCSPPDGSMDFQFGEGRECVNCGAVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPSKRLVNEVSNLCHPLETATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPISMRKDGIQTRKRKPKKQQGGSGSTSSTTTTSTSASSPLSQSSAASSDTKHSGGDKLSSSPDQGGKKRADGVITAMYQAAHHPIKSEPLGLGGALGGGLGSLGPLGSIAPNVGYPGTHGPFAAAQQFGLPGHHHASSSPPDYAHHHHHHSHHSHHHSKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -