Tpal001855.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- MYT1L
- Assembly
- GCA_012932325.1
- Location
- NW:15736229-15751979[+]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.2e-15 2e-11 43.4 7.4 1 28 346 373 346 374 0.97 2 5 1.6 7.4e+03 -3.2 0.2 25 29 941 945 939 945 0.71 3 5 7.5e-19 3.5e-15 55.4 8.3 1 29 958 986 958 986 0.98 4 5 8.8e-17 4.1e-13 48.8 5.5 1 29 1007 1035 1007 1035 0.97 5 5 0.0008 3.7 7.3 0.2 7 21 1079 1094 1078 1097 0.84
Sequence Information
- Coding Sequence
- atgGTGGACGTCGTGGCCGAGACAGACCCGGCCGTGGGCATCGAGGACGCCAAGAAGAAGCGCAAGAAGGCGCAGCGCTGTGTGGAGAACAACAACTGCGAGGACACGCCCACCAAGATGGACTCGGTGGACGTGCagaaggtggccgtcgtggcgcccACGCTCATGGCCTCGGTGCCGACGTCGGCGGCCCGGAAGCGCGCGCACAGCCCGCGCCACTCGCCGTCCAGGAAGATGAGCAAGATggtggcgtcggccggcggcgtggacaACGAGACCCTCATCCGGGAGACGGAGGCCGCGCTCAAGAGCCTCTCCGGCAGCTGGCCCGGCGTGCGCGCGTCGTACTACGGCAaccacgaggccgccgacgacaaGTTCGAGAACCTGTTCGACGagaagcacgccgcggccaaggcccggtgcgccgccacggcctcgcccggcctcggccccgactCCCTCAAGGACGTCATCACCCTGCGCGGCCAGAAGACGCcctcgcgcgcgctgcgcccgcccaccggcacggtgcgcggcgtgcgcagggaggacgacgccgacgactcGTCGCAGGAGCTGCACATCGACCTGGACAAGGACGAGGACCGCAAGGACTTCAAGAAGACCACCATGATGCACCACCACACCGGCTTCGGACccttcccgccgcggcccacgttCATCGGCTTccccggcgacggcctcgcccccgaggtcggcgtcggcgcgccgggcgtcgGCGGCATGCCCGGCATGGACGACAagcccccgccgtcgtcgctgtgCCTGCTCGAACTCAACCTCAAGTTCGAGGAGGAcgagcagccgccgccaccgccgcccgccgccgcctcgcccgaccCCTCCTCCAAGCAGTACACCatcctgcagcccgccggcgccgggtcgcgcgccgccacggccctgcaGGACGTGGCCCGGGAGGGagtccccgccgtgccgcggtcccAGGACCTGCACCGCACCTTCGGCCCGCTGTCGCCCGGCGTTGGCCTCAACCGGGAAGGCAGCAAGTGCCCCACGCCGGACtgcgacggccagggccacgccaccggGCTGTACCCGCACCACAGGAGCCTGTCGGGATGTCCGAGAAAAGACAAAGTCACACCTGAAATGAGCAACTCCGTGAGCGGACTGCACGCGGACTTCGACTCGCCCACCTTCCCCGGAGTGCCCGTCCCCAAGCCCGCCTGGCTCTACGGCGTCAAGGACTCGACAGAGTCGCCCTTCTACAAGCCCGTGCCGACccaggcaccgccgccgcagcaacaacagcaacaagctcagcaacagcagcagcaacaacaacaacagtctCAAAGTCAAACACCCTctcaaccgcagcctttaccgcaacccccaacccccacccAGCCCTCACcaacgcagcagcagcaacagcaacatcaacagcagcagcagcaacaacagcaacaacaacagcagcagcagcaacaacagcaacagcagcagcaacaacaacagcaacaaacgcagcaacagcagcagcagaagaaGACGGAGGACCTGGTGAAGAGCATGAAGAAAGAAGTGGGCGAGCTTCCCGGACACAACCGACTGAACCTTCTCGTCCCGAAATCGGAGGCCTCCCTCACCAGGTCGGcgtcgccgcagcccgcgcaggccgtgcgccagcagcagcaccagcactcCCAGAtcatgcagcagcagcaggcccagcagcaggcgaGCTACGAGGCGTACCTCAGCAACCAGGACTCCAACTCGTCGTCCATGTCCAGCATGGACACGATGCGGTCCCCGGGCTCCATGCTGCCCTCGCATCTGCCGCAGCCCTCGCCGCACCACCTGCCGACCCACagcatgcagcagcagcagcagcaacagcagcaacagcagcaacagcagcaacaacagcagcagcagcagcaacaacaacaacactcgTACTCCATGTCGCTGGTCGACCACCAGAtggcgcagcggccgccgtACGACGTGACGGCGGGCGAGGACATGTATCAGCGCGCCGGCAGGTTCAGCGAAGACGACGTCCACCGCGCGTACGGCGTGCAGACGGTGCAGTCGGTGCAGCGGCCGGTGGTGTCGTACCCGGACCTGGGGCTGCGcgtcggcgtgggcgtgggcgccgtcggcgtgggccccgtcggcgtgcctggGAGCTTGGTGCCCGTGGGGCCGTACGACAGCAGGCCCTACgacagcagcacgccgcccatcggtcaggcgggccaggccagcgtcTCCACCCCAGCCTACGACCGCGACGGGCCCAGCCCCATgtacggcggcgaggtgggtcGGTACGAGCAGACCGAGCCGGTGGACTTCTCGACGGCGCCGGACAGTGTGTCCGCCGTGCCCTTCCCCGGGCAGCCCATGGCGCGGTTCCCCGCCggacccgcggggccgccgcccccgcccggaccCGCCGGCTACTCCCGGGACTCGTCGCCGGACTCGTCGGCGGGCCACTTCCTGGACTACAGGGACGCCAACGGCTACGGCGGCATGAGTCcggtccacgccgcgcacgccgcccacgccgcgcacggctacggcctgggcggccccaACCTGGGCGGCGACTACCCGGGCAGCTCGTACTCGTACGGCAACTACTGCGGGACCAGCGGCTACCCGGCCACCTACCCGGGCCACGTGGCCAGCTACTCGCCGCAGCCCTGCTACTccatgccgccgcccagccacccgcaccccggccaccccggccacccgcACGGCGTCGGCTCGCTCGACAAGGACGGCGTCAAGACGGAAGGGCTACCCGGCTGCCCGCGCAGCGACCGGTCGCAAATCCAGCCCCACTCGCAGGAGCTCAAGTGCCCCACGCCGGGGTGCGACGGCTCGGGCCACGTGACCGGCAACTACTCCTCACACCGGAGTCTGTCCGGCTGCCCGCGGGCAAACAAACCCAAGAGCAAACCCCGAGATGGCCAGGATTCTGAGCCTCTCAGGTGCGTCAGGCAGTGTCCCATCCCCGGCTGCGACGGCTCGGGGCACTCCACCGGCAAGTTCCTGTCGCATAGAAGCGCGTCGGGCTGCCCGATCGCCAACCGCAACAAGATGCGCGTGCTGGagagcggcggcacggtggagCAGCAcaaggccgccgtggccgccatcaAGTTCGGctcgggcgtgggcggcggcctcggcggcggcgtgtccgtcTCGGATCCCTGCGACTCGCTGCAGGGCCACGTGACGGGCGCCTTCCTGAGCCACCGCGGACTGGGGCCGgtccccgggcccggcggcgtcggcgtcgtctcCGGCGGCCTCCCCTCCAGCAACCCGACGGGCTCCGGccccacgggcagcaccaacCTCGGCGCCGGCAGCAACCTCAAGAAGGGCTTCAGCAagtacccgccgccgcccgaggACATGAGCGGGATGTACGGAAAGGGGCCAGTATGGACTAACTTATGGAAACTCGGCATACTTCCCCAGTCCCTACACTGCAAATAA
- Protein Sequence
- MVDVVAETDPAVGIEDAKKKRKKAQRCVENNNCEDTPTKMDSVDVQKVAVVAPTLMASVPTSAARKRAHSPRHSPSRKMSKMVASAGGVDNETLIRETEAALKSLSGSWPGVRASYYGNHEAADDKFENLFDEKHAAAKARCAATASPGLGPDSLKDVITLRGQKTPSRALRPPTGTVRGVRREDDADDSSQELHIDLDKDEDRKDFKKTTMMHHHTGFGPFPPRPTFIGFPGDGLAPEVGVGAPGVGGMPGMDDKPPPSSLCLLELNLKFEEDEQPPPPPPAAASPDPSSKQYTILQPAGAGSRAATALQDVAREGVPAVPRSQDLHRTFGPLSPGVGLNREGSKCPTPDCDGQGHATGLYPHHRSLSGCPRKDKVTPEMSNSVSGLHADFDSPTFPGVPVPKPAWLYGVKDSTESPFYKPVPTQAPPPQQQQQQAQQQQQQQQQQSQSQTPSQPQPLPQPPTPTQPSPTQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQQQQQQKKTEDLVKSMKKEVGELPGHNRLNLLVPKSEASLTRSASPQPAQAVRQQQHQHSQIMQQQQAQQQASYEAYLSNQDSNSSSMSSMDTMRSPGSMLPSHLPQPSPHHLPTHSMQQQQQQQQQQQQQQQQQQQQQQQQQHSYSMSLVDHQMAQRPPYDVTAGEDMYQRAGRFSEDDVHRAYGVQTVQSVQRPVVSYPDLGLRVGVGVGAVGVGPVGVPGSLVPVGPYDSRPYDSSTPPIGQAGQASVSTPAYDRDGPSPMYGGEVGRYEQTEPVDFSTAPDSVSAVPFPGQPMARFPAGPAGPPPPPGPAGYSRDSSPDSSAGHFLDYRDANGYGGMSPVHAAHAAHAAHGYGLGGPNLGGDYPGSSYSYGNYCGTSGYPATYPGHVASYSPQPCYSMPPPSHPHPGHPGHPHGVGSLDKDGVKTEGLPGCPRSDRSQIQPHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCVRQCPIPGCDGSGHSTGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAAVAAIKFGSGVGGGLGGGVSVSDPCDSLQGHVTGAFLSHRGLGPVPGPGGVGVVSGGLPSSNPTGSGPTGSTNLGAGSNLKKGFSKYPPPPEDMSGMYGKGPVWTNLWKLGILPQSLHCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -