Tpal005872.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- CSRNP3
- Assembly
- GCA_012932325.1
- Location
- NW:2880844-2886526[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.21 3e+03 -2.5 0.1 95 152 371 428 343 440 0.68 2 3 0.15 2.1e+03 -1.9 0.1 33 80 580 627 569 640 0.64 3 3 8.9e-101 1.3e-96 322.4 12.4 1 218 642 864 642 864 0.85
Sequence Information
- Coding Sequence
- atggATGCAACAACAGGAGACCGGGCGGGGGAAACCTCTCAATCTGAGACTTCCTTGCCGGTCACTCTGCCTGTTCCTGCGCCTGCGCCCGTCCCAGCACCTGCACCGCTGGTGCCATCCAACTCAACCACAAGCCTCTCCTCAAAGCTGGAGGCTGACCAAGTTAATGTACCAACCAAATGTGTAGACATGCTGGGTGATATTGTTTCAGAGACAAATGGGAAGGTGGAGGTGGAGCACATAAGCCTCAGCTCTGCGCAGGGTCAAGAAGAAACCAGTACTTGGCCCGGGGATGTTGATGATTCAGCACTGGAAGAAATAAATTTGGTAAGGCAAGACAAATCAAGAGATCAATCAGATGTGCCAGACCAAGAGGTGCAAATTTCTGGAACTGACAGATGGTGTGACAGTGAAGCTGTTAATACGCATGACCTAACAGCTGCTGCAAATCCTCACTCAATAAATGGCAACGGCGTGTGTGAAAGTGAAGCTTCTGCAGAAACCGCATCGAGCCCCAATGTCCAGTCTTTGGTGAAATCTGAGACAACTTCTCCAGAGAAAAGTGCAAAGAGTGTAATCTTTGAAGCTACTGAACTGCATTGTGGTTCATTGCGAACAGTGCTTGCAAATGGTCATGTGAACTCCACCTCACCAAGTATAACAGGTGTAGGGAGTTTGATTTCGAGTGGTTTGTTAGAGAAGCTGGAAGACAGTTCTAAGGGTCTTGATGAACAAGAGGCACTTATTGAATCTCATGACCGATCTGATGGCAGTGATTCAGGCCTAGGATCTGAATCTGCTGAAGCCCTTTCCTCCAACTCGGCTGATGAACTTTGTAGTGGAACAGCAAGTGATACAGAATCATTCTTTGCGGGAACTCATTCTGGAAAAAATTGTTCTTCTACTGTAGGTGATGAGATTCATATCGGTGAGTCTTTCTCTGCTTCAAGTAAATTATTTGACCAAAATAATGCCATTATCACTCTTGATCCTGAGCAATTTAATGCACAAGTATCAAATTGTGTAAATGGTTCTTCTAAAGGAAGTAATCTAATTGAAGACAAAAAGTTGACTGTATGTGAAGAACAAAACCCTTTAGTGAATGTTTATAATAATATTACAAGCTCAAGCACACAAGAAGTAGACTATCAATCACTGTTGTGTGAGAAGCCATTAGAAATTAAGAAAATAACTATAGAATCGGATCATGAACCTTTGAATGAAGCAGAGAATTCAACCCGCAAAGAGGCAGAAGAACCCCAGTTATCTCTAGAAGATTGTGGTAGCTTAATTGGAGTGGATGCAATAGAACCTCATGATTCAAAATTAGTTTTAGAAAATAAGAAATTCACTGAAACCTGCAAAGGAGTTGATGTGAACTTTCAATCTTCACAAGATGCTTTTGCATGTGATAATCTCGACTTAAAATCTTGCTGTGACAAGACTTCAAGAGAAGAAAGTGGTATTGGATCACCCTCTGTGGGAGAAGCAATGCCCACTGAGTGTATTTCTGAAACAGAAGCTTTATGTGATGATAATATTCCTACGTTTGATGATTTACAATCGCCTCCTGGAGAGACTGACATCAAAGTTTCCCTGGATGAAGAGGACAGTGATGTCCCTTTACAAACACCAACTGTAATATTAACACCAATTTTACCAGAAGACTTCAGCATGAAGGCCAAAGGACCCGAATCTGTTTCAACTATGATTTGTCAGGGAGATGACAGTGTTGATATTGGCTTTTCTGATTCACACCAGAAGACTGAATCCCTGACCTTGTCATCTGAGAGTAACTCTGTGGAAGCTATTGCTGGTCCAAGTGGAATCAAACAAGAGATGACAGAAGAGATAAGGACCATAGAGAGAAGGAGTACGCTCAAAAGGTCAGCTTCATCCTCTTGTGAGGGTGAAACTCAACCTAAGAAAAAGAAGTCAATAACCTttgactctgtctctgtcttctACTTTCCTCGAACACAGGGCTTCACTTGTGTCCCTTCACAGggTGGATCTACTCTTGGAATGACACAAGAGCACACACATATGCATCGGTTTACCATGGTGGAGCATGCTGTGGAGCAGCGTCGTGCTCACCGTAACATGCTACTCCAGCTACGTCAGAGTCCCGATCCAACTCGACCAGAGGAAAGTGCAGCTTGCTCTGTGCAGAGTGGTAATGGTGGTGGAGATGAATCCACTGATGATTCTGATTCAGAGGAGGAGCAGAGTGAAATTTCAGAAGAGGAGATGGATATGGAtggattttattttcttcagCCTGTGCCAACAAGACAGAGACGTGCGTTATTGAGACAAGCTGGTGTACAGAAAATTGATTCTGATGAAAAGGACGAGTGCCGCGATATTCGCACATCCCGGGAATTCTGTGGTTGTGGCtgtaaaaacttttgtgacccAGAAACCTGTTCTTGTTCTCAGGCGGGGATCAAATGTCAAGTGGACCGTCTGAATTTCCCTTGCGGCTGTACTAGAGAAGGATGTGGCAATACCTCAGGTCGCATTGAATTTAACCCAATGCGAGTTCGAACTCATTTTATCCACACCTTAATGCGTCTTGAGCtagaaaagaaacaacagAAAGAAGATGATGAACTTAGGAGGCAGCAACAATGGACAAACCAAATCTCATCTGGTGGAAGTGATGTTCCGGATGCCAGTTCTTCTTCAAGTGCAGAGGTAGATTCTTGTGCAGATGTAGGTTTTGCTAATTCGCAGAATGCTGAAACCTCTTTACCGAGTGATGATCAATATTTTATGGGAGGTCAGCAAGGGTACACCCAACAGCCAATGCAACAAACAGAACAGCAGAGGAGAGTGCCAATGTTTGTAATGAACCAAGGTAGTTTTCAGTACTCACAGTCTGGGAGCAATTACAATGCAGCCCAGGGTGCGAGTTACTCTGCCTCTGGGTCATTCAACTATTCTAATAGTCAAAGTTCTCAAGATGTCAATTATCAACAGCAGCAATTCAATTTCCAATCTTACCAAAGTTCTTCTCTACCCTCAATGTCAAACATAACAGGAAATTATAGAAATAATATGTACAGGGAGCAGTGTCCTGGTAGGCCAGGAGATGCAAACTTTGTTAATGGTGTGTCATGTCAAGAACAGCAGCTTGGATTGTATGTAAATGAGCCATGTGAGCTGCCAATTCAAGCTGCTGAGGATGACTCTGCTTCATCAGAAAGTTCCAATGTGGGCCAATATACAGCTTTAAATTCGGTCTGTACTTTAAGTAATCAGCTTGAGCCATATTCAAACTTATTAGGGGGCAGATGTCAGTATGCAACATCTCCCACTGAGGGTGAAAGCAGACCGGCTGAACTGATGGAAACAGGTACAGACGGCTCTCAATCTAGTGATGGTACAACAAGGGAGGCTGGTCTTTCAACAAATCCTCCAGAAGACTGTGATGAAAACTTTGGTGAAATTATTAAAAAGTCAATAGTTGAAACAGTGTCTGCATGA
- Protein Sequence
- MDATTGDRAGETSQSETSLPVTLPVPAPAPVPAPAPLVPSNSTTSLSSKLEADQVNVPTKCVDMLGDIVSETNGKVEVEHISLSSAQGQEETSTWPGDVDDSALEEINLVRQDKSRDQSDVPDQEVQISGTDRWCDSEAVNTHDLTAAANPHSINGNGVCESEASAETASSPNVQSLVKSETTSPEKSAKSVIFEATELHCGSLRTVLANGHVNSTSPSITGVGSLISSGLLEKLEDSSKGLDEQEALIESHDRSDGSDSGLGSESAEALSSNSADELCSGTASDTESFFAGTHSGKNCSSTVGDEIHIGESFSASSKLFDQNNAIITLDPEQFNAQVSNCVNGSSKGSNLIEDKKLTVCEEQNPLVNVYNNITSSSTQEVDYQSLLCEKPLEIKKITIESDHEPLNEAENSTRKEAEEPQLSLEDCGSLIGVDAIEPHDSKLVLENKKFTETCKGVDVNFQSSQDAFACDNLDLKSCCDKTSREESGIGSPSVGEAMPTECISETEALCDDNIPTFDDLQSPPGETDIKVSLDEEDSDVPLQTPTVILTPILPEDFSMKAKGPESVSTMICQGDDSVDIGFSDSHQKTESLTLSSESNSVEAIAGPSGIKQEMTEEIRTIERRSTLKRSASSSCEGETQPKKKKSITFDSVSVFYFPRTQGFTCVPSQGGSTLGMTQEHTHMHRFTMVEHAVEQRRAHRNMLLQLRQSPDPTRPEESAACSVQSGNGGGDESTDDSDSEEEQSEISEEEMDMDGFYFLQPVPTRQRRALLRQAGVQKIDSDEKDECRDIRTSREFCGCGCKNFCDPETCSCSQAGIKCQVDRLNFPCGCTREGCGNTSGRIEFNPMRVRTHFIHTLMRLELEKKQQKEDDELRRQQQWTNQISSGGSDVPDASSSSSAEVDSCADVGFANSQNAETSLPSDDQYFMGGQQGYTQQPMQQTEQQRRVPMFVMNQGSFQYSQSGSNYNAAQGASYSASGSFNYSNSQSSQDVNYQQQQFNFQSYQSSSLPSMSNITGNYRNNMYREQCPGRPGDANFVNGVSCQEQQLGLYVNEPCELPIQAAEDDSASSESSNVGQYTALNSVCTLSNQLEPYSNLLGGRCQYATSPTEGESRPAELMETGTDGSQSSDGTTREAGLSTNPPEDCDENFGEIIKKSIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -