Tpal001889.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- MYSM1
- Assembly
- GCA_012932325.1
- Location
- NW:16818224-16823457[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 1e-07 31.6 0.1 3 41 98 136 97 138 0.97
Sequence Information
- Coding Sequence
- atggcggacgacgacgaagtTGATATTTTGGGCGATTTTAATTTGGAAAACCTTCTGACTAAAGATGAAAACCGACTTGCTTCTTGTTATGATGGAGGTGTTGGATCTGATTTGCTCCATTGCGATTATCAGTCATCATGGTACCTGGACGTTGGTTCCCCTCCGTGGTATGAAAGAAGCCAATTGGACTCTTTCTCTCCGCTACCATTTTCGCTCCCTCTCAGCTCGTCCCCCAATAATTTGCAGTGGAGTGACCCTTCTGCAGGGCCTAGCTCCACAGGAAATGCTGCAAGTTGGACAGAAAAAGAGCGCAGTCTGTTGGAAGAAGGCTTGGAATTATTTGGACGGAGCTGGTCTCGCCTGTCTCAATTCATTGGAACCAAGACACCTCATCAGATTAAGAGCTACATGAAGCTTGCTCGACCAAGTAGTGAGAGTGAAACTTTATCAGTTTCCATATCGTCGAGCGTTGATGGAAATGTGCAGGCCCCTACTATTTCTAGTGGAAACAATATATCTTACACAGAACTTATTGACGACTTGCAGATACCGGCTTCCATGGAAGAGGTAATTGCTGTTGTGAGTACAGCAAAGCCCACAATATCTTCAAgttctacaaactcaagtcgCATATCTGAAGCAAACAGCAACAGATTCAAAAAGAGAAAGACCAAGCCACCTCAGACCTCGAAAGCAAAACGAGGGCGTCCTCCTCGCATTCCTCCTCAGAAACCAACTCTCAAACGGGGCCGTGGTCGTCCTAGAAAATTGCATGGTGGCACCACAACTGACCATAGCACGGAAAATCCAAAAAACATCAATGTAATTTCAGAACTTACTGAAACTCCAGGATTAGGGGAAGAAGTGGTAAGAATTAGAAGTCTCAGTTCAGAtgattctgatgttgaaatTGATattgaagatgatgatgatgatgccaTAACAAGTTCTGATGATAAACCCCTTTTTAATAATACGGCGTTGGAAGAAGAAACCACTGTTATTGTGAAGCAAGAACCTGTAGAACTGCCAGAAGATATCCCTTGCTCATTGCCTAATTCTTCTGAAGAATTACTGGCTGAAGTGAAAACTGAAAATGCCACTGAATTTTCATCTACTGaattttcattgaaaatttCAAGTAATGAGTCCAGTACATCAGGGAAGGAGTCCAAGAACCTCATTTCACATCAAGATATCCTTGATCAGATACACCGGTTGCCGCCACCCACTCATGAACATACTCTGCGGCCAGATGAAATTCTAGAAGAAGAACGGGCCATCCATTCTGAATTTTTCGAAGGAAGGCCTGCCAAAACTCCAAAGAGATATTTAAAGATTCGCAATCATATTATTGATTCCTGGCTTCAAAGTAAACCCAACTATGTCACAAAAACCTCTGTTCGTGGGGGCTTAAGAAATTGTGGAGATGTCAACTGCATTGGCAGAATTCATTCATACTTGGAGCAAACAGGTGTTATCAATTTTGGCTGCGAGCAAACAAAGTATCATCACCCTCCTCAAGTACATGTGGGATCATCAAGCAACATATCTGTTCTCAAGGAGAAAGTGAATCGTGAATTATTGTGCATTGAAGGAATGCGTCCCAGAAAAAAGAAGCAAGAAATTGATGAGGACCTCTTGGGATCAACTGAGGGAGGCTATACAATTCTGCACAAGGAAGATGGTCAAACATTCCTAACTTACAACACCATTGTAAAACCCAAGGTTTCCAAGACAGACACATCTATAAAACTTCTTTATTGTTCGCAATTTTCAAATGAGAAACCTGCCCCATTTACTGTCCATTTGCACATTGGAGCTCTTTTTGTGGTCGATACCCATTCTCACTGTTCTCACGACACTGAAGTAATGGGTCTACTGGGTGGTGAGTTGAGAGAGGACTCATTGCATATCATTCGAGCTGTGTCATGTCAGGCCAGCCTTAGTAGCAGCACCCATTGTGACATGTGTCCAGTCTCTCAAAGTGAAGCCAGTGACACCATTTCAAAAGATGGTCTAAGTGTAGTTGGCTGGTACCATTCTCATCCAACTTTTGTACCAAATCCTTCCTTGCAAGATCTTTCCACACAAGCAGAAATGCAAAGATGGTTCTCAGATACCAAAGCAGCCCCCTTTGTGGGCCTCATTCTGTCCCCTTATTGTGCCAACACCACGTCCTTTGCTAGTATTTTCCGGGTGTTGATAGTGGACCCGGAGGGCGAATCCGGAGGCACGCCTTACCGCTTCCCTGTGAGTATTGTTTCTGAGGATTTGGATGTGGAGGAGCTTTTGGAACACGTGGATGGGACCATTGCTTCCATGCGCAAGCCTTCACTTGAAGGTCCACCGTATTCTCATGGTCCAGATGCCCCTGTGCTAAGCTGCTTGCAAAAGTGCATGGAAAGTATCAGGAAACACATGGAAACATGCCAGCCACCCCTTTCATCAGCCATACAGAGGCGCATATTGGAAGGAATCTTGGATATTTGTAAAGCACGGTGTGACTTTGAACCAGCTCATTCTTCTTTAGATAATTAA
- Protein Sequence
- MADDDEVDILGDFNLENLLTKDENRLASCYDGGVGSDLLHCDYQSSWYLDVGSPPWYERSQLDSFSPLPFSLPLSSSPNNLQWSDPSAGPSSTGNAASWTEKERSLLEEGLELFGRSWSRLSQFIGTKTPHQIKSYMKLARPSSESETLSVSISSSVDGNVQAPTISSGNNISYTELIDDLQIPASMEEVIAVVSTAKPTISSSSTNSSRISEANSNRFKKRKTKPPQTSKAKRGRPPRIPPQKPTLKRGRGRPRKLHGGTTTDHSTENPKNINVISELTETPGLGEEVVRIRSLSSDDSDVEIDIEDDDDDAITSSDDKPLFNNTALEEETTVIVKQEPVELPEDIPCSLPNSSEELLAEVKTENATEFSSTEFSLKISSNESSTSGKESKNLISHQDILDQIHRLPPPTHEHTLRPDEILEEERAIHSEFFEGRPAKTPKRYLKIRNHIIDSWLQSKPNYVTKTSVRGGLRNCGDVNCIGRIHSYLEQTGVINFGCEQTKYHHPPQVHVGSSSNISVLKEKVNRELLCIEGMRPRKKKQEIDEDLLGSTEGGYTILHKEDGQTFLTYNTIVKPKVSKTDTSIKLLYCSQFSNEKPAPFTVHLHIGALFVVDTHSHCSHDTEVMGLLGGELREDSLHIIRAVSCQASLSSSTHCDMCPVSQSEASDTISKDGLSVVGWYHSHPTFVPNPSLQDLSTQAEMQRWFSDTKAAPFVGLILSPYCANTTSFASIFRVLIVDPEGESGGTPYRFPVSIVSEDLDVEELLEHVDGTIASMRKPSLEGPPYSHGPDAPVLSCLQKCMESIRKHMETCQPPLSSAIQRRILEGILDICKARCDFEPAHSSLDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -