Tpal011185.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- ncor1
- Assembly
- GCA_012932325.1
- Location
- NW:7872468-7919151[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-08 5.1e-05 23.0 0.0 3 43 611 651 610 653 0.97 2 2 2.1e-16 1.8e-13 50.0 0.5 3 46 950 994 948 994 0.97
Sequence Information
- Coding Sequence
- ATGGAAACGGTGCAACAGACCGTAGTGCACCTGGACCATGGTGGTATTATCCAGCAACCGTCCTCCATGGCTTATGCGCAACGCTCCCAGCTACACAGgCCGTCGCAGCCAGCTGAGGGCTTGTCGTTCAaagccgcccagcgccccgtgGTCGTCTCTGCCCCCCAGGCCGCTTCTCACACCAcctcccccgccgtgcccacgTCTGTGCAGTCCGTGCAGCCTGCGGCCACCCCCGTCAGCACGtctgggggcgcggccggcgggcccggtgGCCCCGGAGGTCCGGGCGTCTACCAGGTGCGCGTCAACGCCCCGCAGCCCAACAGCTACCACCGAggcctgcccgggctgcccggcctgccaggcctgcccgcgcgcgatggccccgggcccggccctggcggccctggcggccctggaccctcccccgccacgggGTTGTCGTACTCGCCGCAGATGGTGTACGTCGCCAGGGAGTCGTCGTACCGACCGGGAGTCGTGCCCGTGGGGCACACGCTCGAGCCCCTGCTGCAGACCCACCCGGACCCCAACCGGCCcttggaccggccggccaaccGGACGGTCGCCTCGGACTTGCCGAGGATGGTGCAGATCCAGCCacccggccagcagcccgtcgTGTCGCTCCCCAGGGAGGGCACCGTCGTCCTGCCCATGAGGCCGCAGAGGATATCCGTGGCGACGACGTCCATCGTGAGCGTGGCCGCCCCCAAGGACGTCCACGTCCAGCTGGAGATGGTCAACCCACCTGAAATCCCGCACCAAGACATGCTGCTGTTCCCCTACGGCCGGAACCCCGTGGTGAGCTCGGCTTCGACTCCAGTGTCAGTCCATcccccggcgccggcgccctccaacccccctcccctggacGCTGGACCGCCCTTGAAGAAGATCCGGCTGGGGGACGCCAAGCAAGAGATGCAGCCTCTGAGAGTGGACACTAGGGAACAGCCAGCTTATACGCCCCAGGTCGAAGCCATCTCCCCAACCTTGCCCAACGAAACAAATCAAGACGAGGCGTTTCGTATTGCCAAGGATGACCTCCTTAATCAAATTCATAAAATGGATCTTGAAATAGCCAAAGGGGAGAAAGAGCATAGATCGTTGAAAATCAAGGAGCAGGACCTGGTTTTGAATGCATACAAGCTTCGCACCAGACACCGCATCAAGAAGGAGGAACCCGATGAGGAAATCTCACCGCCCAAGCATCAAAGTCCTGCTCAAAAAATTTATGCTTATAACAGACATTTAGCCTATGCAGCACACGATGCACTTGCAAAGCTTGGGCCTGAAATTCATTatCCCCTCTACAATCAACCATCTGACACGGCAGTGTATCATGAAAATAAGCGCAAGTACCTGACTTTCAAAGAGACTTTAATGGAACATCTGAAGAAGAAGCATGTTGAAAATGAAGAACGTGATAAATATTTGGCCACCACCTACTCCAGACTTATGCAAGAGTGGGTGAGAAAGGTTGAAAGAATGGAATCTTCACAAAAACGGAAGGCTAAGGAAGCTAAAAACCGTGAATTCTTTGAAAAAGTATTCACTGAGCTACGAAAGGCTAGGGAGGACAAAGAAAGATTCAACCGTGTTGGTGCTCGCATCAAGAGTGAGGCTGACATGGAGGAAATCATGGATGGCCTTCAAGAGCAAGAAATGGAGGACAAGAAAATGAGATCTATGGCTGTTGTTCCGCCAATTCTTCTCAATGCGTCTCAGAAACGCTTGTCATTTCAAAACAATAATGGTCTTATAGATGATTATAGTACAGAATATAAAGAAAGACAATTACTAAATGTTTGGACAACTaatgaaaaagaaatattTAGAGAGAAATACTTGCAACATCCCAAAAACTTTGGATTAATAGCCTCCTATCTGGATAGAAAAACTGTATCTGATTGTGTGCAATATTATTATCTTAGTAAGAAGTCTGAGAATTATAAGCAGCTACTACGTAAATCAAGGCAAAGGACTAGATCAAGTAGAAATAATCCTGGGAAACCTAACAATTTGGCCAATAATGCAGGCCTTGTAGATATTTTAAGTAGCACTGGTGTTACTACTCGCTTGCAGCGAGAGCAGCTTCAGCAGAAAAGAGAAGAGCCTAGAAATCGTGAACCTGAACGACAGACAACAGATTCTCCTAAACCACCAGCATCTAATTCTCCAAATACCTTGAATAATAGTAATTCTATTACAAACTGTGGAGGTGGGAATTCTAATTTTATAGGATCTCATCTTCAAAATGACACAGCATCTCAAGATGTAAAGAAAGGGGAGTCCAAAttagaaaacaagaaaaaggagagaagaaaagaagagaaaaagaagaaggagagTGAGCAAATGGAGTCAAGTGATGATGACATCAGTGAACAAGAGAAGCCCGTGGGCACGCAGCCCTGCATCCTGTGCAAGCAGCAGGTGGACGGCGTGACACAGTCGCGactgctgccgcgcgcgcaggccgcgcagtaCGGGCTCCGCGAGGACGAGGTggtggccggcgcgcgcgtgtgcaaCCCGTGCCGTTGCAAGGCGGTGCGGTCGCGCTACGTGCACTGCCCGCTGCCGTCGTGCCCCAACGCCAAGGGCCGCGTCAAGCGGGTGCGCCCCTTCCCGGCCAAGTGGGCCGAGCTGTCGGCCGAGCAGAAGGAGCCCATCATCGCCGAGTTCCAGATCCCCGTGGGCGTGTCCAAggcgtgctcggcctgcttcaACCGCATCTCGCGCCGCATCAACCCGTCCGAGGAGAACAGCGCGAGCGGCGACGCGTCCATGTcgcccagccccgggcccggcaaCTCGCTGCGCTGGACCGAGGACGAGACGGACCTGCTCAAGAAGGCCCTGCGCGAGCACGGCACCAACTGGCAGCGCGTCTCGGAGGCCGTGGGCGGCACCAAGACGCACCACCAGTGCAAGAACTACTACTTCAACTACCGCAAGAAGATCGGGCTGGACGCGTTGGTGCAGGAGTACCACAAGGTGAGGGAGAACCATCTCGGCGAGGAGAGGAAGCCTGCGCTCACGGACGAGGAGGAGAGCGGCTCGAGCACGTCGTCGTGCGACGAGGTGCCGCCCAGCACCAACATCGTCATCGACAGCGACAACGCgagcgccgccaacgccctgTCTGCCTCcaacgcggcggccaaggcggcggcggcgacgacgggagCTCCGGCTCCGGGGACGGCTgtcccgggggcgggcccctcggcgacgacgacgcccggaCCCAGCCCTgccaccacccccgcgccgcccccaacaGGCAGCACccttcccgccgcccccgcggctgACGCGGAcaaggcggccagcccggcgccgaCGCCCACTCCACCCTcgaccacggcgccgccgtcggcctcctcggtgACGCCGGTGTCGTCCGTCACTCCAGTGACGCCCTCGCCGTCACCGGCACCGGCTGCCAACGGCACCCTGacgcccgtccccgccgtgacGCCGGTCACCACTGCCATCTCCAACACGACGGtgtcctcgacgacgacgctgaCGGCGGGCGTGCCCTCGTTGACCTCCTCGCAGACGCGCACCACGAGCGAGTCCTCGGACCAGCTGAGGCCCACCAACAAGGAGGACTATGACAGCTCGGCAACGGAGGCGCCTACCATCCGGAGTGACGCGCCAGAGGACCTGTCCGTCAAGAGGCCGCGCGACGGTCCAggacccggccccgccaccctgggCATCGCCGCGCCCTACCCGGGCCGCAacccctcgcccgccgcggcgcccggcctgcagcacccgctgcacgccgtgccccaGGGACACCAAGGGCCTCTCGGTGCGCACGCCAAGCCTCCCACGCCTCAGAtcgccgccgggcagccggggcagccgggcaccCCCATGACCCTGTTCTACCACGGCGTGAGTGCCGCCCAGCACcacacggcgcacggcgcccccgccacgccgcacctgGTGATGGGTCCCCGCAGCCTGACGCCGCAGCACGGGCAGCTcgcccagcacagccagcacctGAAGCAGCCCCTGAAGGTGGTGCCGCCAACCCACCCCGTGCCCGTGCAGACCAAGCTGTCCCCCAAGTTGGTGACGCACGtgagccacgcgccgcccaaGGCCGGCTCCAtcacgcacggcacgcccgtGTCGTCGCCGCAGCGCTACTCCGAGGGCATgctgcgcggccaccacccccaccagccccatgtgccgcaccagccccaccagcccgtCGGgaaggagggcggcggcggctccatcACCCAGGGCACGCCCGTGCACCTGCCCacccgcctgcccgccacctCCATGTACTACGACTTCAAGCGGCAGTCGCCGAGCGGTGTGGTGTACCAGGCCGGCGTCCACCCTCCCAGCCACCCGGTGGGTCTGCCTCCCACGCATCCAACCGCCCCCAGCCCTGTAACCACCACGTCGACGTCGTCCGTGTCGTCGGGCGGCTTCACCTCGCCCTACCCGCACAcgggtccgcgcgccgcgccgtcctacACTGTGGAGCAGCAGCTCAACTCGCGGCAGATCATCATGGCGGACTACTACACGTCGCAGCAGATGCACCCGGGCGTGCGCCGGCCCAATGACAAGGGGTCGCCGCTTTACTACCCGCCCGCGCCCGTCGGGGCGTCCGGACTCTCGCCGCGGGCGTCgccagggcccggggcgccgccgtcgcagccTCCAACGCCGCAGTCCTCGCCGCAGCCCGTGTCCAAGGCCTTGCCGCACACGCCAGCGCACACGGCGGGCACGACGGTGTACATCCAGAAGTTCACGACGCAGCCGTCGCCCATGCCTCAGCGGACTCCACCCCCGCAAGCGCGGCAGAGCATCATCCAGAGGCACAACACGacgccgcagccccagccgccgcctccgcagccggcaccgccgccgcagcaccaACGGCCGCTGCACTTCAgccacccgccgccgggccacgaggcgttctcgtcgctcgTGGACCTGGCCGTGCAgcagcccagcctgcccgtGCCGCAGCCGGTGTtgcagcaccacgccgacaAGCGCAACGACAGGCTGCCCGACCGGCACCAGGACCGCCACCACGAGGGCCTCGGCAAGACCATGGTGGACTCGCTGCGTGACCGGGAACGCGACCagcgcaccccgcccggcaccgACCCCGCCGAGCTCACCAGGCTGGCTGAGATTCAGCGCCATCGAGAGTCTCTCATGATACAGGTGCAGCAGCAAAGAAGGCTGCAtgaacagcagcaacagcagcagcaaaaccaccaccaccatcagcaacagcaacaacagcgtCAGCACCCGTCGCCCATCTCTCACCACACTTTGAACCAGGCGCGACTGGCTGACCAGCACCGCCTGATAGCGGCCAGCCACCCGAGCCACGCGAGCCACAACCCGCGGCACacaccgtcgccgtcgccccaacatccccccgggccgccgcacggccagcacccgCCCAgctcgcaggccgcgcaggtgtCGCAGGCACCCAGCCCCGCTCAGAGGGAACCCAGCGTAGTGAACCGGCCCAGCTCCGTGCCTCAGCCGGGTctcagcggcggcgccagcagtgccgcgccggccacgccgggcgtggcggcctccggccccggcaggcccagctCGACGTCCGGCGACTCGACGTTGACGGCCGCCAGCGTGATCGACGCCATCATCACGCACACCATCAACGAGGGCGTGCCCAGCAGCAACACCAACCATCCGGGACCTCTGACGTCGCGGCTCGGTGACAGATTATTCTCGGGCTTCCATTCAAGTAGTCCTCAGTTGAACGAGGCTTCCATCAAATCATCCCCATTGAAGGGTTCCGcgacggccgagccggggaCGGAAtctgccagcagcgcgcccagcaaCAGCACGGCCgcacccccgcccgccgcgcccccgaaGAAGACCCTGAGCGACCACATCGACTCCCTCATCACCAAAGACCTGaacgcgcccagcgcgcccagcggcaTTGGCGGCTACCCGCGAACGATGGCCTACCCGCCCACGttcggcgtgccgtcgtccAACGCGGCGGTAGCGCCGGGCGCCCAGTCGGTGGAGGAGCAGGCCGGGGTGCTCTGGAAGCAGCGGCGGAGGGACGAGCAtgaggccgccagcgcggccagggacaAGGGCCGCAGCACACCGCAGCCGCCCACGACTCAgagccagggcgcggccagcggacaGGCGGCGGGCGACGAGCGCTCTATCATCAGGATCGCGCAGATGTCATCTAGTCCCCGCAAGCCGGGCCAGCAAGTGGAGCCTGTGTCGCCGCCCGAGTCGTCcgcacccaccccacccgccaccacggcgcacTGGttggccaccagcagcagccacacCTCGCCCAccaccgcgtcctccgccgtgaccagcgtggcggccagtgccgtggccgcggacccCATGGCCTTCCTGCAGCAGCGGAGGCACTtcgccgaggggcggggacACTTGTCCCCCCTGGAGTACGTCAAGAATCGCATCGTGGAGGTGATGCGCACCACGGACGATGACAAGGTGACTGACAGCCGCAAGGAGGACGGCGAACAGCCAGCCTCCACCGCTGCCTCCTCCAAGACTGAGGGCCGAAGCGTCAGCGGCAGTCCCCGGGGCAGCCCTAacgccgcgcccagcgagGACAAGAAGGACGACGGGGAGAAGCCCCCTCGGCCAGGGACGgcgcccgccaccaccacacagCCTCACTCCGCCCCCTACGTGCAGACCACCACGTACACCTACCCCTTCTCGGCGCTCAGcgtgccccaggccgccgtcgccccccAGACGGGCGCTGCGGGTGCGGCCCCCAAGCCCcctgccatgctgccgcccACACTGTCCAAGGAGCCGGTCGCCCCGGTCGCCGAGCCCAAGCCGCTCCTGTCGTCTCAGTATGAGGCGCTCTCCGATGAAGACTAG
- Protein Sequence
- METVQQTVVHLDHGGIIQQPSSMAYAQRSQLHRPSQPAEGLSFKAAQRPVVVSAPQAASHTTSPAVPTSVQSVQPAATPVSTSGGAAGGPGGPGGPGVYQVRVNAPQPNSYHRGLPGLPGLPGLPARDGPGPGPGGPGGPGPSPATGLSYSPQMVYVARESSYRPGVVPVGHTLEPLLQTHPDPNRPLDRPANRTVASDLPRMVQIQPPGQQPVVSLPREGTVVLPMRPQRISVATTSIVSVAAPKDVHVQLEMVNPPEIPHQDMLLFPYGRNPVVSSASTPVSVHPPAPAPSNPPPLDAGPPLKKIRLGDAKQEMQPLRVDTREQPAYTPQVEAISPTLPNETNQDEAFRIAKDDLLNQIHKMDLEIAKGEKEHRSLKIKEQDLVLNAYKLRTRHRIKKEEPDEEISPPKHQSPAQKIYAYNRHLAYAAHDALAKLGPEIHYPLYNQPSDTAVYHENKRKYLTFKETLMEHLKKKHVENEERDKYLATTYSRLMQEWVRKVERMESSQKRKAKEAKNREFFEKVFTELRKAREDKERFNRVGARIKSEADMEEIMDGLQEQEMEDKKMRSMAVVPPILLNASQKRLSFQNNNGLIDDYSTEYKERQLLNVWTTNEKEIFREKYLQHPKNFGLIASYLDRKTVSDCVQYYYLSKKSENYKQLLRKSRQRTRSSRNNPGKPNNLANNAGLVDILSSTGVTTRLQREQLQQKREEPRNREPERQTTDSPKPPASNSPNTLNNSNSITNCGGGNSNFIGSHLQNDTASQDVKKGESKLENKKKERRKEEKKKKESEQMESSDDDISEQEKPVGTQPCILCKQQVDGVTQSRLLPRAQAAQYGLREDEVVAGARVCNPCRCKAVRSRYVHCPLPSCPNAKGRVKRVRPFPAKWAELSAEQKEPIIAEFQIPVGVSKACSACFNRISRRINPSEENSASGDASMSPSPGPGNSLRWTEDETDLLKKALREHGTNWQRVSEAVGGTKTHHQCKNYYFNYRKKIGLDALVQEYHKVRENHLGEERKPALTDEEESGSSTSSCDEVPPSTNIVIDSDNASAANALSASNAAAKAAAATTGAPAPGTAVPGAGPSATTTPGPSPATTPAPPPTGSTLPAAPAADADKAASPAPTPTPPSTTAPPSASSVTPVSSVTPVTPSPSPAPAANGTLTPVPAVTPVTTAISNTTVSSTTTLTAGVPSLTSSQTRTTSESSDQLRPTNKEDYDSSATEAPTIRSDAPEDLSVKRPRDGPGPGPATLGIAAPYPGRNPSPAAAPGLQHPLHAVPQGHQGPLGAHAKPPTPQIAAGQPGQPGTPMTLFYHGVSAAQHHTAHGAPATPHLVMGPRSLTPQHGQLAQHSQHLKQPLKVVPPTHPVPVQTKLSPKLVTHVSHAPPKAGSITHGTPVSSPQRYSEGMLRGHHPHQPHVPHQPHQPVGKEGGGGSITQGTPVHLPTRLPATSMYYDFKRQSPSGVVYQAGVHPPSHPVGLPPTHPTAPSPVTTTSTSSVSSGGFTSPYPHTGPRAAPSYTVEQQLNSRQIIMADYYTSQQMHPGVRRPNDKGSPLYYPPAPVGASGLSPRASPGPGAPPSQPPTPQSSPQPVSKALPHTPAHTAGTTVYIQKFTTQPSPMPQRTPPPQARQSIIQRHNTTPQPQPPPPQPAPPPQHQRPLHFSHPPPGHEAFSSLVDLAVQQPSLPVPQPVLQHHADKRNDRLPDRHQDRHHEGLGKTMVDSLRDRERDQRTPPGTDPAELTRLAEIQRHRESLMIQVQQQRRLHEQQQQQQQNHHHHQQQQQQRQHPSPISHHTLNQARLADQHRLIAASHPSHASHNPRHTPSPSPQHPPGPPHGQHPPSSQAAQVSQAPSPAQREPSVVNRPSSVPQPGLSGGASSAAPATPGVAASGPGRPSSTSGDSTLTAASVIDAIITHTINEGVPSSNTNHPGPLTSRLGDRLFSGFHSSSPQLNEASIKSSPLKGSATAEPGTESASSAPSNSTAAPPPAAPPKKTLSDHIDSLITKDLNAPSAPSGIGGYPRTMAYPPTFGVPSSNAAVAPGAQSVEEQAGVLWKQRRRDEHEAASAARDKGRSTPQPPTTQSQGAASGQAAGDERSIIRIAQMSSSPRKPGQQVEPVSPPESSAPTPPATTAHWLATSSSHTSPTTASSAVTSVAASAVAADPMAFLQQRRHFAEGRGHLSPLEYVKNRIVEVMRTTDDDKVTDSRKEDGEQPASTAASSKTEGRSVSGSPRGSPNAAPSEDKKDDGEKPPRPGTAPATTTQPHSAPYVQTTTYTYPFSALSVPQAAVAPQTGAAGAAPKPPAMLPPTLSKEPVAPVAEPKPLLSSQYEALSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -