Tpal000328.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- MYB
- Assembly
- GCA_012932325.1
- Location
- NW:1719897-1741805[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6e-17 3.2e-14 52.4 0.5 1 45 88 132 88 133 0.97 2 3 5.9e-21 5.2e-18 64.6 2.1 1 46 139 185 139 185 0.98 3 3 1.1e-22 1e-19 70.1 0.6 1 44 191 234 191 236 0.96
Sequence Information
- Coding Sequence
- ATGTTGTCGTTCCCGTACGACGTcctgcaccgccagggccatggtggcggccggcgcttcCAACGCACGGTCACCGTGGTGGAgcgccccgagccgagcgagcgcgccgagcaaaGCGAGCAAAGCGAGCAAACCGAGCGCTGCAGCTCCCGGTCCGGCTACGAGAGTTCGTCCAGCGACGAGCTCTCCGACGAGTCGGCCGTCGACGAGCTGACGACGTCCCTGagcgccagcggcgcggctggcaggAAGGCCGTCAACAAGGGCCGATGGACCAAGGAGGAGGACGCCCTGCTCAAGACGCTGGTCGAGGAGCACAGCGAGAACTGGGAGATGATCGCCAGCAACTTCCCGGACCGCTCCGACGTGCAGTGCCAGCAGCGCTGGCTCAAGGTGGTCAACCCGGCGCTCGTCAAGGGGCCCTGGACCAAGGAGGAGGACGAGAAGGTGCTGGAGCTGGTGGTGCGGTACGGGCCCAAGAAGTGGACGCTGATCGCGCGGCACCTCAAGGGCCGCATCGGCAAGCAGTGCCGCGAGCGCTGGCACAACCACCTCAACCCCAAGATCAAGAAGACGGCCTGGaccgaggaggaggacaagATCATCTACCAGGCGCACCGCCAGTACGGCAACCAGTGGGCGCGCATCGCCAagctgctgcccggccgcacggACAACGCCATCAAGAACCACTGGAACTCCACCATGAGGCGCAAGTTCGACCCGGAGCTCCGCGCCGAGTCCACGGGTCGcggacggggccgcggtgcgtcgcggcgctgcggggtggCCCTGGCGTCGTcgcaggggcaggccgcccagggcaCCCAGGGCACGGCCTTGGTGGCGTCCACCatgtcgcgcggcgccggcaagaCGCCCATGGCCtaccccgccctgcagcccacGCCGGTCAGCaacaccaccacgaccaccaccgcgTCCTCCGGCTCCTCCGGCTCCTCCGGCAGCAGGTTCCTGTTCACTGAGTACGGCCTGCACGCGTACGAGAGCTCGGAGTGGTCGTCGCCTGAAGTGTACGAGCAAGCACCGAGCCGCGGCTCGACGGGCAGCCCAGTGCCCGCCGACAGCCCGCTGCACCAGCAGTTGCTGACGCCTCAGCCGCAGCAGAGGACGTCAACGTCAACGTCGCGCATGCAAGTGTTTGGGGGAATCAAGCTGGAGGACTCGCCGGACCCATTCTCACCATTCAAGTATTTGAGTATGCAATCTAGTCCTTCAGATGAAGGTTACAATGAGTTGGATGCAATGAAAATCTCACCGAAAAAGGAACCTATTAGCAcctTTGGTCAGATGCAGTTACTTGCAGTTACTCCATTTTGTACAGAGTCTCCTGAATTCAAACATGATATTGTTAGCTTTCACCCTCAAGATTCTGAACTATCTTCAGATTATGCCCTAACTTCACCCCCAACTCAGTCGATGCAGAGTAGTGGTCTTGGAGTGTCAATAGGGTCCCCAGATAGGCAAGCCACCCCTATCAAACAAGTACCATTCAGTCCTTCACAGTTTTTAAATACACCCAATTTAATGGAAATATCGTTGACTGGAACACCTGTTCGACGGAACTTAGTCGCTGCCCAATCAACACCTCTGAACcgtgagggagacagggaCAGGGAaggcagccccgggccgtTAAGTACTCCAGAACTGCTTCCAGTTCACCAAGCTGCAAGGCAACGGATGGCCAGAATCAACGCTGCTGCTGAAAATGTGGAGCAGCCTTCAGAGCCCAGTAGTAATGACTCAACTCCAAATCGTAAGAACAAATTGACGCAGCCCAGGACTCCCACGCCTTTCAAGGATGCCTTAGCCAAACTTGAGAAGAAAAATGGAGCAATGAAGAACTTGCCTCAAACACCTACTCGACTTGAGGACATTGATGAGTTGATGAAGAAAGAACAACCAGATTTGTCGGATTCGCAGTATGAAACTGATACGGCCAGCATGATAAATTATACCTATCAGGATTCTCTGCAAGACAGCGGCTATGTTGGACTCGCTAAGCGACGCAGTGCTACTCCAGTAGGCAAGGAAAATGTTCCAAACAAAAAAGTAAGGAAAGCACTCGCACCTTCATGGAGCACGCCGGGAAACATCAGTGTTCCGGGTGTAACGGACCCTTCTTTCGTCGTAGAATCACCCAGCAAATCTTTGACGGCTGAACGATCGGTGACATTTTCACCATCTTGTTCCTTTGTTGTAGAAACCCCTAGTAAGTCGTTGGTTGGTGACCGGTCAGTACTGTTTTCTCCACCATCAATCATGACAGACCTCGATGAAGTTCTTGCGGTTCCGGTAAATGAACCTCCATCCCCAAGCACTAAGGTGGGTTACTATTAA
- Protein Sequence
- MLSFPYDVLHRQGHGGGRRFQRTVTVVERPEPSERAEQSEQSEQTERCSSRSGYESSSSDELSDESAVDELTTSLSASGAAGRKAVNKGRWTKEEDALLKTLVEEHSENWEMIASNFPDRSDVQCQQRWLKVVNPALVKGPWTKEEDEKVLELVVRYGPKKWTLIARHLKGRIGKQCRERWHNHLNPKIKKTAWTEEEDKIIYQAHRQYGNQWARIAKLLPGRTDNAIKNHWNSTMRRKFDPELRAESTGRGRGRGASRRCGVALASSQGQAAQGTQGTALVASTMSRGAGKTPMAYPALQPTPVSNTTTTTTASSGSSGSSGSRFLFTEYGLHAYESSEWSSPEVYEQAPSRGSTGSPVPADSPLHQQLLTPQPQQRTSTSTSRMQVFGGIKLEDSPDPFSPFKYLSMQSSPSDEGYNELDAMKISPKKEPISTFGQMQLLAVTPFCTESPEFKHDIVSFHPQDSELSSDYALTSPPTQSMQSSGLGVSIGSPDRQATPIKQVPFSPSQFLNTPNLMEISLTGTPVRRNLVAAQSTPLNREGDRDREGSPGPLSTPELLPVHQAARQRMARINAAAENVEQPSEPSSNDSTPNRKNKLTQPRTPTPFKDALAKLEKKNGAMKNLPQTPTRLEDIDELMKKEQPDLSDSQYETDTASMINYTYQDSLQDSGYVGLAKRRSATPVGKENVPNKKVRKALAPSWSTPGNISVPGVTDPSFVVESPSKSLTAERSVTFSPSCSFVVETPSKSLVGDRSVLFSPPSIMTDLDEVLAVPVNEPPSPSTKVGYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -