Tpal008690.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_012932325.1
- Location
- NW:2934763-2952746[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 4.8e-15 54.7 0.0 1 44 294 338 294 338 0.96 2 2 1.1e-18 1.7e-15 56.1 0.0 1 43 682 725 682 727 0.95
Sequence Information
- Coding Sequence
- ATGGGAAGACGGAAATGGCGGCAATTGGGAGCCATTGGGACCTGGGACGACCACGACTCGAAGGCGTGTCCCGCCGACGGCCCTGCGGACCCTGCCGAAGGCCCGAAAGGCTCGaaggggccccgggggccgacAGACTCACCGCAAGACTTCGAGCCCCACCAAGACCTGCAGTGCTGCTTCTGTGACGACCCGCTCGACACGAGCACGcagcgcgtcgcgtccgacAGCGAGGACGACAGCGGGAGCGTGGCGAGCGAGGGGAGCGCATGCACgctgctgcccctgccggccaccatgaccacccTGGAGGCCGTCACCTCCATGGGGgcgaccctcgccgccgtggccgccttcaagcagggccacgccaacaactcgacgccgacggccacctccaccagcagcgccagccccaccgccgcgtcggggcTGTACCCGCTGGGCCACCCCGGGCTGCTGCCCGCATGGTACCTCTCGTCGCCGCACGCggccgcagtggcggcagtggcggcggcggcgcagcagcagcaacagcagcagcaacagcagcagcaggactcCAACCGGAGCACGCCGCTGGACACGAGttccccgggccccgggtcCGGCAGTCCGAGCGTCGgcgccagcccctcggccttccctccgacggcgtcctcgcccggCACCTGCTCGCCCAGCGCTGCtagcggcgcgggcggcgccagccccATCGACATGCCCATGCCGCTGGACCTgagcgccaaggccgcggccctggcggcgctcgcCATCGAGAGCGACTCGCTGCGGGACTCCCTCAAGGTGCCCGACAGCAGGAACATTTTCAAggcgcggccgcggccgaacaCGGCGCTGACGCACCGGCGGACCTACACCGAGGacgagctgcaggccgcgctgcgggacaTCCAGAGCGGCAAgctggggacgcggcgggccgccgtcaTCTATGGCATCCCGCGGTCCACGCTGCGCAACAAGGTCTACAAGCTGACCATGGAGCGCAAGTGCGACCCCGCCAGCCTAGTCATGGCGGGCGCCGACCCCACGCGGCTCTCGCTCAGCTCGCTGGCCCTGCCcaccgaggacgacgacggcgcgctgtccggcggcgaggacgacctGGCCGAGAAGATGTCCAAGTCCCCGctggacggcccggcggggctgggtgcgggcgAGGAGAGCGAGGAGggagcgtcgccgccaccgtccgGGCTGCCCGCCTTCCCCGGGGCGGACCAGTGGGGTATGGCGGGGCTGGACTACCACGCGCTGGCGCCGTACATCTCCAAGCtcctcggcgcgcagcagtCCCTGCTGGCCCGCAACGTGTCCGGCTCCAGCCCCGGCCTCGGACCCAccacgccgggcagcggcggcgaaaGCCCcagcgccgagggcgccgactTCCTGCCCAAGTTCGCGTCACCGCTCCTGCCCGACTTCCTGTACCGCATGATGGCCGAGGAGCGGGCGCAGGGCCAACCCTTCCACAACGGCGACGGCCgtgacggccgcgacggccgcgacgacgacaagcggagcacggcgtcacCCTCACTGTCCAGGTcggaggccgacgacgaccggCCCACCTCGCCGGCCAACGTCATCCTCAAGATTCCGTCCTTCAAACCCACCTCCaagaacggcggcggcgacgccggcctgttctcccggtgcggcggcagcggagaGTCTAGTCAGCACtccgagcacggcgccgcgtcgagtCCCGGCGCGCCCGCACCCGCCGTCAgtccgcccagccccgcgcagaTCCTGGCCAAcaaggcgctggcggccaagtTCCCCCACCTCAGCCGACTCGGCCCCATCTCACCCATCTTCGACCTGAAGCGGCCTCACTAcggcagctcggcggcgcacCACGCCATGGCCGAGTCCGTCATCAAGAGCatgcagcaggccgccacccgggccgccacgaccacgacgagcaccagcagcagctcgtCGTCGCAGGCCAGCGGCAAGGGCACCCGGCCCAAGCGCGGCAAGTACCGAAACTACGACCGCGACGCGCTCAACGAGGCCGTcaaggcggtgcagcgcggcgagatgagcgtgcaccgcgcgggcTCCTTCTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTCAAGGAGAGGCACTTGATGAGGCCGAGGAAGCGGGACCCCAAGCCAcagcagcccgccgacgaCAAGCCGAAGCAGGACGCGGTCGGCGTCGGGAACGTGCTGAGGCTGTCGCCGGGCGACAAGAtgcccagcctgccggggATGTCGGGGCTGCCCTCGGGACTGCCCTCGGGGCTGCCCGGCACCAGCAAGCCCAAGCCCTTCATCCagccgcccctcgcggcgccgcagaaCGGCCTCAAGGCCAGGTTCGACCCCGCCGGCATGCCGCTGGGCTACGGCGGcatccctcccttccccttctgGGGCCCTGGCtacgcgccgctgccgctggacTTCAGCGGCCAGACGCCCTTCAACTCCAACACCAAGCAGCTCTTCACCACGCAGATGATCCAGAGGCTACAGGAGGCCCAGGAGAACAGCCGGAACAGCTCGGCATcagggcccccgccgccgggggtgCCAGGTTCAGCGGggggccctcccggcccgggccctggccccggccccgggtcTGAAGCTGGTCTgaggccgggggtggggctgggcgccacgccggacgGCAGTCCCGTGTCCAGCAAGGCCGCAGCGCTGGCGCTCGGCCTCaagcggggccgcgacgtggAGGACGCCATGGACGACAGCTCCAGCGACAACAACACCCTGCTGGACGGCATCATCCGGTACGGCCTGGAGAAGGGCCTCTCCCGGCCGCCCAAGGAAGCCCTCGAGAAGATGGCCAACAACGCCTTACTAGACCAGCTGTGCCGCAgccgcctggacggccgcttggacggccgcctcgacggccacctggaCGCCTCGCGGATGCGGCAGCGGACGTCGAGCAGCTCCGAGGACGACGAAGTGCGGaggccgccgctgtcgctgctgcgcAGCAACGTGGTGCAcctgtcgccgtcgtcggacGGGTCGGTGGCGGACCGCGAGGAGAAGAACTCGCACTACGAACTCTCGGAGGACGGTGACGGTGACGGCGACCGCGAGGAGGACGATCGGTTACCCAGACCGCCAAGTCAAGCCACAAACAACGCCAAGCCATTCCATTTGAACCATTCCCCCACGCAGGACAGCGAACGGAGCGAGCGACTCGCCGGCAGTGTGCCCgcagtggctgcagtgccTGTGGCCATACGGCCCGCCCTCgacgcccgcctcggcgccatcAACGGACTAGAGGCCGCGaacgcgacggtggcgccgacggcgaggagcGAAGACTTGTCTGGACTCGTGAAAAGTGCCTGTGATAGTAAACTTAGAGTGGAGTCGAGAGCAGCGAGTGGGGCTGGACCTGACGGAGACGGAGCCAAAGACTCGAGCGAGGACCAAGGGCGGGAGGATACCAAAACTCAAGACATTTCCTGA
- Protein Sequence
- MGRRKWRQLGAIGTWDDHDSKACPADGPADPAEGPKGSKGPRGPTDSPQDFEPHQDLQCCFCDDPLDTSTQRVASDSEDDSGSVASEGSACTLLPLPATMTTLEAVTSMGATLAAVAAFKQGHANNSTPTATSTSSASPTAASGLYPLGHPGLLPAWYLSSPHAAAVAAVAAAAQQQQQQQQQQQQDSNRSTPLDTSSPGPGSGSPSVGASPSAFPPTASSPGTCSPSAASGAGGASPIDMPMPLDLSAKAAALAALAIESDSLRDSLKVPDSRNIFKARPRPNTALTHRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLTMERKCDPASLVMAGADPTRLSLSSLALPTEDDDGALSGGEDDLAEKMSKSPLDGPAGLGAGEESEEGASPPPSGLPAFPGADQWGMAGLDYHALAPYISKLLGAQQSLLARNVSGSSPGLGPTTPGSGGESPSAEGADFLPKFASPLLPDFLYRMMAEERAQGQPFHNGDGRDGRDGRDDDKRSTASPSLSRSEADDDRPTSPANVILKIPSFKPTSKNGGGDAGLFSRCGGSGESSQHSEHGAASSPGAPAPAVSPPSPAQILANKALAAKFPHLSRLGPISPIFDLKRPHYGSSAAHHAMAESVIKSMQQAATRAATTTTSTSSSSSSQASGKGTRPKRGKYRNYDRDALNEAVKAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDPKPQQPADDKPKQDAVGVGNVLRLSPGDKMPSLPGMSGLPSGLPSGLPGTSKPKPFIQPPLAAPQNGLKARFDPAGMPLGYGGIPPFPFWGPGYAPLPLDFSGQTPFNSNTKQLFTTQMIQRLQEAQENSRNSSASGPPPPGVPGSAGGPPGPGPGPGPGSEAGLRPGVGLGATPDGSPVSSKAAALALGLKRGRDVEDAMDDSSSDNNTLLDGIIRYGLEKGLSRPPKEALEKMANNALLDQLCRSRLDGRLDGRLDGHLDASRMRQRTSSSSEDDEVRRPPLSLLRSNVVHLSPSSDGSVADREEKNSHYELSEDGDGDGDREEDDRLPRPPSQATNNAKPFHLNHSPTQDSERSERLAGSVPAVAAVPVAIRPALDARLGAINGLEAANATVAPTARSEDLSGLVKSACDSKLRVESRAASGAGPDGDGAKDSSEDQGREDTKTQDIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -