Tpal005693.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- Arid5b
- Assembly
- GCA_012932325.1
- Location
- NW:7862944-7883313[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-24 1.1e-20 73.5 0.0 2 89 310 394 309 394 0.95 2 2 3.6 8.5e+03 -3.1 0.0 20 35 496 511 491 511 0.75
Sequence Information
- Coding Sequence
- ATGGATAACGGCAATATTGAGTTGGTCGGAGCGCCGTGCGGAACTCACGGACCGTACACTTTCTACAAAGCCTTCAAATACAACAAAAGtggaaaacaaaacattttaGCTTTAAACGAATTTGTGTTCATCAAATTGTGGAGTGATTCGGACCTAGTGAGCATCGGTGAACTGCAGCAACTGTGGGTGGATAAAAACAGTGAACAGACGCTCGCGAGCCTGCGCCTCTACATTCTTCCCGAAAATACCCCAGAAGGGAGGAGCGACATACATGGAGAGCATGAAGTCCTTGCCATCTCAGAACGAGTCGTCATTCGCTGTGAGGATTTGCTGACATGGCTGACGGAGGATGCATCTTGGAGCTGGGGCTTGCCAGCAGTTTGGGACAAAGACTGCTCTGGAACAAGGACAGGCAATGGGCCTCCAACTACTACTCGGTTGCAGGCTCTCAGTGATACATGTCTGGACTTCACCGATATTGAAGAAGAAAAGTTAAAACTAGATTCTTCAATATGGGACAGCTGTGGAGTTGTTGTTTTAAGCTTCCCACGATATTGTCGCTATCGTGCTCTTATGAAGAGGTTGGAAGGTGTGCATAACAAATGGCTCAGAAATTCATTGGCAAGCTTGGGAGGCTTTTCAGTTCCATGTCGTGACACTCGGGTGTTATTCTGCAAAGACACTTTTGATTATCCCGATCTTGAAGGACATGAACTCCTTTGCAATCACTTAGCccctaaaataaatttgagatccaagaaaaagaaaaagaccaATTCACCGGGAGAAACAGACTCTAATGAATCAGAATCGTCTCTGTCTACCATATCGTCTTCAACAAAGGAAAAGAAATCTAGAAGCAGCAGAAACGGTTTACACTATGACCTTACACAACCATCATATCGCCACAAGTCTGCAAGTCATGAGGAGAAGATGTTCCTGGATAGATTACATGACTTCATGAATGACAGGCAAACACCCATAGGCATGCCCTTAGTGGGGTATAAGGAAATGGACCTTTACCAATTCTTCTCTAAAGTTCAGCGTCTTGGCGGGTATGAAGGGGTGACTGCCAATCGTTTGTGGAAACCTATCCTGGATGAAATGGGAGGGGATCCGGCAAACACTAGTGCAGCTGCTCACTCCAGAAGACACTATGAAAGATTACTTTTACCATATGAAAGGAAGTTGCGCTCTGATGTTTTGAAACGAGCTGGATTTACTCAAGATTATGAAGCATGGATAGATGCTCTATCAAGTGCTGCAGAAATGAAGGATTGTAGTGATAGTGATAGAAGAAAAACTTCATCTTTGCGAAGTATTCGACTAAAACCAGAAAAATCATCAGATCTTTCTGGTAAAGAAAACATTCCTATGTCCATGTTCCGTGCTCTCTCAGAATTGGGGGACCCAACAAGAACTGTTCACTCTCCCGAGGTTATTGTGCTGGACTCTGAATCGGAAACACCTATTAAAAACGTTACTACGCCGATGGTTCCTGTtctcaaaaaaagaaaactggaTATGCTTAAAGAAGGGGGTCTGGAAGTAACCCCTATCGGCTCTCCTGGCTCATCAGGTTCCAGCCATGCTGATGGAAGATCTAGTGTTAAACCGTCTCCGAGTCCAGACACACCACCAGGCCAAGTGTCCATAATGGTGACTCCAGACTTGAGTCACATGCTTGGCTCTCCAAAAGCAGGCTCACCTGAAACCTGTGCTTCACCTCTGGAATCAACACAATCCCCAGCAAATTCAAGAACTGTAATCAATGTTCAAGATCTAAAAAATTCTCCTTTGTTAATGTATCCTGGTTTAGCTGCTAGCCAGAATGGGAGAAACGATCAACCTCCTCCAAAGGTCATCCAGTCTCGATCAATTTATGCATCTGGGGGAGTATGGTATGGAAACCCCAAAGATTACCCTCGTCCAGGCGGGTCTTCGGGCACAGCAAGCAACAATCAGACCCCACCTCCTGCAAGGTCTTTACAAGCAACGCTTAATATTACCCCCAAGTCAGGACCTAGCAGTGGGAGTGGTGTGGATGTGTTAGACTTACGGTGTAAAGGTGAAAAACCAGCTGTTGACATGGTCCGTGTTATGCCCAGTGTACCTCCACCCAGACATCCTCCCATCAGGGACTCAGGACGAGCCAACGTCCCTCAAGGAGCTACTCCACCAACCATTCCTCGTACCACAGTGGGGTCCAATTTAGAAATCACACTAGTGCAAAATCCGAAACTCGCGATAGCAAAACTACAGCAAGAGCAAAGAAATGTGTTATTACAACAAAGAAGGCAAGCCCAGCAGCAAGCCAAATCTGTTGCCCCTCTGAATCGCCCTTCCTCAAGATTGGACAATGGCAAGCCCCATACTTCCTCATCAGCCTCAACAACAAACAGCAGTAGAAGTCGACCACCATCTGTGAACAATGCTCCTTCTGGCGGTCTGGTCATCCCATCATCCCCTTATATGCTAGGAAATAACAGTAGTAGTAGCAGCACCAATAGTAGTGGCAGTAATAATAACAGTAAACGTCGAAATTCAAATGAGCAAAGATCCCGCGGAAGTTCTAGCACACCCGTGTCTTCTGCTGCCAGTAATCCTTACTTTTCTGGGGCTGCTGCTTCATTGTTTCCTAATTTGCTTCAGAACCTTCCTGCTGGATCGGCAGCCGCGGGGAAGAATGCATTTTTACCTCCAATTGATTTAATGTACTACCAGGCTCAGGCTCAGGCGTACAATCAGTTTTACAACCCTGCTGCAGCCTCTGCATTACCCATGTCATCATTACCAATGTCAACGCCACAACTGTTCATGCCAACCGAAGAGCAGTTCcaattttacaaaaatatCTTGAGTCAACAGTTAAAATCAAATCCTGCTCAAGCCAATGAAGACATTGCTAAATTGTTGCAGGACCAATCTACTTCCATCACGCTTGTTGGGAATTCAAAAACTCCAACATCTAAATGA
- Protein Sequence
- MDNGNIELVGAPCGTHGPYTFYKAFKYNKSGKQNILALNEFVFIKLWSDSDLVSIGELQQLWVDKNSEQTLASLRLYILPENTPEGRSDIHGEHEVLAISERVVIRCEDLLTWLTEDASWSWGLPAVWDKDCSGTRTGNGPPTTTRLQALSDTCLDFTDIEEEKLKLDSSIWDSCGVVVLSFPRYCRYRALMKRLEGVHNKWLRNSLASLGGFSVPCRDTRVLFCKDTFDYPDLEGHELLCNHLAPKINLRSKKKKKTNSPGETDSNESESSLSTISSSTKEKKSRSSRNGLHYDLTQPSYRHKSASHEEKMFLDRLHDFMNDRQTPIGMPLVGYKEMDLYQFFSKVQRLGGYEGVTANRLWKPILDEMGGDPANTSAAAHSRRHYERLLLPYERKLRSDVLKRAGFTQDYEAWIDALSSAAEMKDCSDSDRRKTSSLRSIRLKPEKSSDLSGKENIPMSMFRALSELGDPTRTVHSPEVIVLDSESETPIKNVTTPMVPVLKKRKLDMLKEGGLEVTPIGSPGSSGSSHADGRSSVKPSPSPDTPPGQVSIMVTPDLSHMLGSPKAGSPETCASPLESTQSPANSRTVINVQDLKNSPLLMYPGLAASQNGRNDQPPPKVIQSRSIYASGGVWYGNPKDYPRPGGSSGTASNNQTPPPARSLQATLNITPKSGPSSGSGVDVLDLRCKGEKPAVDMVRVMPSVPPPRHPPIRDSGRANVPQGATPPTIPRTTVGSNLEITLVQNPKLAIAKLQQEQRNVLLQQRRQAQQQAKSVAPLNRPSSRLDNGKPHTSSSASTTNSSRSRPPSVNNAPSGGLVIPSSPYMLGNNSSSSSTNSSGSNNNSKRRNSNEQRSRGSSSTPVSSAASNPYFSGAAASLFPNLLQNLPAGSAAAGKNAFLPPIDLMYYQAQAQAYNQFYNPAAASALPMSSLPMSTPQLFMPTEEQFQFYKNILSQQLKSNPAQANEDIAKLLQDQSTSITLVGNSKTPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -