Tpal011500.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- grh
- Assembly
- GCA_012932325.1
- Location
- NW:14373250-14483344[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-64 2.5e-60 203.2 0.0 21 221 579 775 568 777 0.95
Sequence Information
- Coding Sequence
- aTGACGCGCCGAGCCGTGATGGACGACCGGCCCTCCTCCCGGGGCACCCCGGGCACGCCCCCCTCATCggtgccgtcggcggcgtccccgcccggcgccgcgccctcgcccggccgccaggccacgcccgcaccgccgcccgcgcccacgccgccgctcaTGCTCGCCACCATGACCCCCGTGAACGTGGACGGCTACCTGTACgagcaccaccacgccgtcacCTCGGAGCACCACGTgcaccaccacccccaccagcCGCCCGTCATCTACAgcacggccggcctcggcgacggcctccccctccccgtgcccgtcggcgccgtggggGTGTCCGACGACGGCCTCATGGACGGCACCGTGTCCGTCGTGTACCAGCAGCAGGTGCCCAGCAACACCGTCGTCATCATGTCGGAGCTCGTCGACGACATGTCCCCCGTGCTGCAGCTCAGGACCCGGCGGAaggacgcggtggacggcggCTCCCCCGGCGACCCCGAcgtggacgcgccgccgccgagccaccccgcggccgaggcggacggCGGCTGGCGGAGCTCCCTGGAGCACCCcctgaccgccgccacctcggccatgCTCAACATCaacgcccaggacgccgaggacgccgccaacggcggccacgccaaccCGCCCATGACGTTCAACGTGTACGAGTACAAGACGGACAAGCTGGGCGAGCTCTGGCCGGCCACGTCCGCGGCTAGCGCCTTGGCTAGCGCCTCTCCCGGCGCCGGAGGGGGGGTCCTGCAGCTCAAGGCAGCCaatggggccgccggggcggggctcacCGGGGCGACGCTGGACGGCGACCTGCATGGCCTCTTcctgcagccgcagcagcaacagtTGCTCGTCAAGCGGGAGCCCGAGGACCTGAGTCACCGCAAGCAGCAGCCGTCGCCGGGACTGGCAGGagggcgcagcagcagcggggccagcAACGGGACCAAGCTGGTGCTCGCCAACGGAGGCGGTGCCcaggaccaccaggaccaccCTGGCGACGTGGTGGACGTGATCAAGGACGAGTATAAGACGATGGCGTACTCGACGCAGATGTTTGGCGGGCAGCCCACGCCGCAGGGCCACCACGGCAGTGGCActccctcccccgggccgTACAACGACCTGGCGTacggcgcgccccccgcgcccggcgccccccAGCAGCCCGTCTACATGCCCAACCtgcggacggccgcgccgccgccgcccacctcCACGGGCTTCACCACCGTCTCGGAGCGCTACTACTCGGACTACTTCCCGCCAGTACCTGACCAGGGCTACGCGCCCCTGCGGCAGCAAATACCCACCTACAtggacggcgccgaggcggcgggcggccccgcctccgTGTCCACCGCCGACCTGGTGCAGCGGTACGTGCGCCAGACCAACGCCTACCACACCACCAACAAGGGCGTcatcgcggccgccaccgccgcggggctcaCAGTGGACCTGCCCTCGCCGGACAGCGGCATCGGCGCGGAGGCCATCACCCCCCGGGACCAGACCGCCATCCAGCAGTCGTTCGACTACACGGACctgtgcggcggccaggcggtgctGGACCCCCTGGTGCGGGCCCCGCAGGGGCAGAGCCCCGGGCCCCAGTCcgcgccggggcagccgggacAGCCGCAGCCCGCGAGAAGCCGGCCGTGGCACGACTTCGGCAGGCAGAACGACGCGGACAAGATCCAAGTACCTAAAGTATACTCCAACTACGGCTTCAAGTACACGCTGGAGACCCCCATCTCGACGTCGCAGAGAAGAGAGGACGACCGCGTGACGTACATCAACAAGGGCCAGTTCTACGGCATCACCATGGAGTACATCCCGGACCCCGACGCGCCCATGCTCAAGAACCACACGGTCAAGAGCGTGGTGATGCTGATGTTCCGCGAGGAGAAGAGCCCCGAGGACGAGATCAAGGCGTGGCAGTTCtggcacggcaggcagcacAGCGTCAAGCAGCGGATACTGGACGCCGACACCAAGAACAGCATGGGGCTCGTGGGGTGCATCGAGGAGGTGGCGCACAACGCCATCGCCGTCTACTGGAACCCGCTGGAAAGCCCGGCTAAGATCAACGTGGCGGTCCAGTGCTTAAGTACCGACTTCAGCAGCCAAAAGGGCGTGAAGGGCTTGCCGCTTCACATCCAGGTCGATACCTACGAGGACCCGAGAGACGGCCCCGTCTACCACCGGGGCTACTGCCAAATAAAGGTCTTCTGCGATAAGggcgcggagcggaaAACCAGGGACGaggagcggcgggccgccaagcGGAAGATGACCGCGACGGGCCGCAAGAAGCTGGACGAGCTGTACCACCCCGCGCAGGAGCGGTCCGAGTTCTACTGCATGGCGGACCTGCACAAACCCCCCGTCCTGTTCACGCCCAGTGAAGAGCTGACGTCAATGGAGTTACAAGGCTTTTACGGCCACGACACGGACAACTCCAGcGTGTCGAACGGTGAGGGCGGCCTCAAGACGGCCGGGACCTCCCCTTTCCTGCTGCACCCCACCAAACCCCTCGCGCACCAGACCCTCAAGTTTCACAATCACTTTCCACCAGATGCGCCCGGCATCAAGAAGGAGCACTCCTTGGAGCCGGAGCCGCTGTCGACGGACGGCGGCCTGTTCAGCTCGCCCGCGCTCAAGAGGCCGCGGCTGGTGGGCCCGCCGGGGACGACcgtcggcgtgggcgtgggccagcccgccgcgacccAGCTGTCGCACCACGGCAACcacgggctgggcggcgccccgcacgtCGCGCACTCGCCGCACTTGCCGCACTCACCGCACGCCACCCACCACGCGCCCCTCATGGCCCACGGCCAcgtctcgccgccgcccctcaccGAGCGCGTCATGCTGTACGTGCGCCAGGAGAGCGAGGAGTACTACACGCCCCTGCACATGGTGCCGCCGTCCACGCAAGGCCTCCTCAACGCGATTGAGAATAAGTACAAAATTTCCCCTTCAAGCATAAGTAACTTGTatcgaaaaaacaaaaaaggGATTACGGTCAAAATTGATGATGAAATGTTAAAACATTACGTGAATGAAGATCTCTTCATTTTAGAGGTCAAACGTGATACTCATGCAGATGAAGAAGAATTATATGAAGTCACTCTCATAGAGCAACTTAGTCCATGA
- Protein Sequence
- MTRRAVMDDRPSSRGTPGTPPSSVPSAASPPGAAPSPGRQATPAPPPAPTPPLMLATMTPVNVDGYLYEHHHAVTSEHHVHHHPHQPPVIYSTAGLGDGLPLPVPVGAVGVSDDGLMDGTVSVVYQQQVPSNTVVIMSELVDDMSPVLQLRTRRKDAVDGGSPGDPDVDAPPPSHPAAEADGGWRSSLEHPLTAATSAMLNINAQDAEDAANGGHANPPMTFNVYEYKTDKLGELWPATSAASALASASPGAGGGVLQLKAANGAAGAGLTGATLDGDLHGLFLQPQQQQLLVKREPEDLSHRKQQPSPGLAGGRSSSGASNGTKLVLANGGGAQDHQDHPGDVVDVIKDEYKTMAYSTQMFGGQPTPQGHHGSGTPSPGPYNDLAYGAPPAPGAPQQPVYMPNLRTAAPPPPTSTGFTTVSERYYSDYFPPVPDQGYAPLRQQIPTYMDGAEAAGGPASVSTADLVQRYVRQTNAYHTTNKGVIAAATAAGLTVDLPSPDSGIGAEAITPRDQTAIQQSFDYTDLCGGQAVLDPLVRAPQGQSPGPQSAPGQPGQPQPARSRPWHDFGRQNDADKIQVPKVYSNYGFKYTLETPISTSQRREDDRVTYINKGQFYGITMEYIPDPDAPMLKNHTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSMGLVGCIEEVAHNAIAVYWNPLESPAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEDPRDGPVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPAQERSEFYCMADLHKPPVLFTPSEELTSMELQGFYGHDTDNSSVSNGEGGLKTAGTSPFLLHPTKPLAHQTLKFHNHFPPDAPGIKKEHSLEPEPLSTDGGLFSSPALKRPRLVGPPGTTVGVGVGQPAATQLSHHGNHGLGGAPHVAHSPHLPHSPHATHHAPLMAHGHVSPPPLTERVMLYVRQESEEYYTPLHMVPPSTQGLLNAIENKYKISPSSISNLYRKNKKGITVKIDDEMLKHYVNEDLFILEVKRDTHADEEELYEVTLIEQLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732422; iTF_00966410;
- 90% Identity
- -
- 80% Identity
- -