Tpal000665.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- Jra
- Assembly
- GCA_012932325.1
- Location
- NW:6924607-6927241[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-14 3.4e-11 42.6 13.9 2 65 207 270 206 270 0.96
Sequence Information
- Coding Sequence
- ATGGTACGCACCCctgccaacaacaacatcgaCACCAGCAGGATGGACCACCACTACTTGAACATGGGAGggcccctgcagcagcaggcgggccaggcggacgCCAAGAAGAGGCCTCTCTTCCTGGACTTGAACAAGCCCATTGCCAAGAAGGGGCGCTTCGCTAACATTGGCCAGCCAGTGTTGTCGTCTCCAGACCTCCACAAGCTGAAGCTTGGATCACCTGATTTGGAGAAGTTTATCATGGGAAATGGTACTCTGACAACAGCGACACCAACCCCCAACACCGCTTCGATCCTCTTTCCGCAACAGCCTGTAACTGAAGAGCAGGAGTTGTTCGCCAAAGGTTTCGCAGTGGCCCTCAACGTTCTTCAGCATAGTGATTCGAGTCAAGGAGGAACCCACATGGACAACATGGATAGCATGGACAACATGGATGGTGGAGATACGAGATTTGAGAGCTCCTCCAGCAACGATTCCTCTGAAGACTTTGCCGGGGAGAATAGTCAAGGAGCTTCATACTCAGGCGGTTACGGGATGTTGAAAGAAGAACAGAGAGTGCCTAGTCTAGGAGGATCTTCACCACCTATGTCACCAATCAACATGGAATCTCAGGAGAAAATCAAGCTGGAACGTAAACGTCAAAGAAATCGTCTGGCTGCAAGCAAGTGCCGTAAAAGGAAGTTAGAGAGGATCGCGAAGCTGGAGGACAAGGTGAAGCTTTTGAAAGGTGAAAACACGGACCTTAGTGCACTGGTTAATAGGCTTAAGCAGCAGGTTTGCCACCTTAAGGAACAAGTAATTGAACATGCCCAACATGGTTGTGAAATTGGACCCGCCCAGTATGGTCTGCAATAA
- Protein Sequence
- MVRTPANNNIDTSRMDHHYLNMGGPLQQQAGQADAKKRPLFLDLNKPIAKKGRFANIGQPVLSSPDLHKLKLGSPDLEKFIMGNGTLTTATPTPNTASILFPQQPVTEEQELFAKGFAVALNVLQHSDSSQGGTHMDNMDSMDNMDGGDTRFESSSSNDSSEDFAGENSQGASYSGGYGMLKEEQRVPSLGGSSPPMSPINMESQEKIKLERKRQRNRLAASKCRKRKLERIAKLEDKVKLLKGENTDLSALVNRLKQQVCHLKEQVIEHAQHGCEIGPAQYGLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -