Tpal001533.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- Nfil3
- Assembly
- GCA_012932325.1
- Location
- NW:7357883-7393635[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-13 1.1e-10 41.0 1.8 2 54 185 237 184 245 0.93 2 2 0.0055 4 7.2 0.1 40 63 594 617 591 618 0.85
Sequence Information
- Coding Sequence
- ATGGTTGCCGAGCTGGTGTCCCGACAAGGGGGATCGCCCGTCAACGGCGAGACCCCCggcagctcgccgccgcgccagagcTCCGGGCCCGGACCCACCATCACCGTCAACAGCGCCCTGGCGCGCCCGCCCAGCGGCCTgttctgcgccgcgccgcccggcccgcccggaggACACCCCAACGGACTCCCTAACGGACTCCCCAACGGACACCCCAACGGACACCCCAACGGACACCCCAACGGACACCCCAGCGGACACCCCAACGGACACCCCAACGGACATCCCAATGGACACCAGAACGGACACCCTAACGGACACCCCAATGGACACCCCAACGGACACCCCAACGGACACCAGAACGGACACCCCAACGGGCTGAGCCAAGGCAGGATGTCCCCGCACTCCCAcatgccgccgtcgccgctgggcggccagcagatgcagcagctgcagcagatGCAgatgtcgccgccgtcgcgcagcCAGTCCCCCGACAACAGCGCGTACccgcagcgcaagcagcgcgagTTCATCCCGGACAACAAGAAGGACGACAGCTACTGGgacaggcggcggcggaacAACGAGGCGGCCAAGCGCTCCAGGGAGAAGCGGCGCTTCAACGACATGATcctggagcggcgcgtcgtggaGCTGTCCAAGGAGAACCACGTGCTCAAGGCGCAGCTCACGGCCATCAGGGAGAAGTACGGCATCAGCGGCGAGAGCGTGCTGAGCGTGGAGCAGGTGCTGGCGTCGCTGCCGTCCAGCGACCAGGTGCTGGGGCAGGCCAAGCGGCCCAAGCTgtcggtggcgccgcccctgtcgccgcactcggccggccagcacactgggcAGCACGCGGGGCCGCAACCCCCGCACGCCGTCAGCccccacccggccgggcccgggccgcaccccggcgtggccggcgtgccccaccccctgcacctacccgcgctgccgccgccgcaccagcccagcctgcccagcctgcccagcctgcccagccccATCCCCACGTCCGTCATCCACCAACCCGTGGggtcgcgctcgccgccgccgccactgcccctgctggggctgggccccctcgcccccgcggccaccggcggcggccctccggACGACCAGGACTTCCCCCCGTACCCGTACCCGCTGCCGACCCTgtaccccgccagcccggccggcgcggccgccgccctcaacctgtcccgcggcgccagggacgaccgcggcctggagcgcggcTTCGACCGCGCCAgcgaccgcggccacgacCTCGGCCACGACCGCAACCTCGACCGCAACCACGACCGCAACCACGAGCGCAACCACGAGCGCGGCCACGACCGCGTCCTGgagcgcgcgccgtcgccctaCGAGCACGAGCtgtcgggcggcagcggcgacgaggccacgctgcacgcgcgggacgcgagggacgcccgcgacgcgcccgccaacaacaacaactgccTGCCGCACAAGCTGCGCCACAAGTCGCACCTCGGCGAgaaggaggcggccggcgcgctgctgtcgctgcaggcgctgcaggccatcAAGAcggagggcgaggccggcggacaccacccgcaccaccacgaggcggactcggcgcgcgccagcccgccctggGACGCCGAGGGCTCCAGCGACGAGAGGGACTCGGGCATCTCCCTGGGCGACTGCGGCTACGGCGGCAACGACGCGCGCCacgggctcggcgcgctcggcctcggcccgctcggcgcgctcggccacgaGCCCCAGGACGACGCGCACCTCAAGAGCgagctggcgaggctggcctcCGAGGTGGCCACCCTCAAGAGCATGCTGCACAAGGGCACGCTgccgtcgctgtcgtcgctgccgccgctgcagcagccccacGTCGCCCTGCTCTga
- Protein Sequence
- MVAELVSRQGGSPVNGETPGSSPPRQSSGPGPTITVNSALARPPSGLFCAAPPGPPGGHPNGLPNGLPNGHPNGHPNGHPNGHPSGHPNGHPNGHPNGHQNGHPNGHPNGHPNGHPNGHQNGHPNGLSQGRMSPHSHMPPSPLGGQQMQQLQQMQMSPPSRSQSPDNSAYPQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMILERRVVELSKENHVLKAQLTAIREKYGISGESVLSVEQVLASLPSSDQVLGQAKRPKLSVAPPLSPHSAGQHTGQHAGPQPPHAVSPHPAGPGPHPGVAGVPHPLHLPALPPPHQPSLPSLPSLPSPIPTSVIHQPVGSRSPPPPLPLLGLGPLAPAATGGGPPDDQDFPPYPYPLPTLYPASPAGAAAALNLSRGARDDRGLERGFDRASDRGHDLGHDRNLDRNHDRNHERNHERGHDRVLERAPSPYEHELSGGSGDEATLHARDARDARDAPANNNNCLPHKLRHKSHLGEKEAAGALLSLQALQAIKTEGEAGGHHPHHHEADSARASPPWDAEGSSDERDSGISLGDCGYGGNDARHGLGALGLGPLGALGHEPQDDAHLKSELARLASEVATLKSMLHKGTLPSLSSLPPLQQPHVALL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -