Tpal014071.1
Basic Information
- Insect
- Thrips palmi
- Gene Symbol
- XBP1
- Assembly
- GCA_012932325.1
- Location
- NW:5126508-5128719[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-16 1.7e-13 50.0 12.3 2 63 46 107 45 116 0.91
Sequence Information
- Coding Sequence
- ATGGTGACGTCTCAAGCTTTCATCATCACCGTCCCAGCCCAGGCTGCTGGCGGTGACAGCGGGATCCAGCAATCACCAGCAATGATTGAACCCACGGTCTCCAACAGGAAGAGGCGGCTGGCGCACCTCACCTTGGAGGAGAAGCAGTACAGGAAGAAATTAAAAAATCGTGTTGCTGCACAAACATCAAGAGATCGTAAAAAGCAACGGATGGATGAATTGGAATCATCCATTGTACTAATGTCTCAGGAGCTTGAAGCCATGACTAAACAGAATGCAACATTGGCCACTGAAAACGCCTTACTAAAACAACAACTACACGATGCCCAGATGACCACTACAGCACTGCTTGAGACTTTACAATCAGAGAAGTGCTCATGTGGCAAGAGTCCTAAAGGCAATGCCCAGGCAACGCCTGCTGAACTCCCGTCCGTTTCGTCACGACCTGCTGAGTCGACTAGACACCCTCTGCTGAAGGGATTGGACGGGAAGCAAGTAGACAGCCTGAGCGTCTTGAGGATCTTGTTGATGACATTCCTTCTCTCCCGGAGCTCCTTGCAGACCTGGGATCTAGTGAAGATCTCCCAGACCTTGGAGACTTGGAGCGATTTGCGGAAAGCCTCCTCCAAGAAGCCTTTGCCAGTGAAGAGAATATCTCAAGCGTGGAACCAGTGGTGGGGAAGGCATCAGAAATCATGGAACCCTGTCGAAGAAGTGCCAGCGTAA
- Protein Sequence
- MVTSQAFIITVPAQAAGGDSGIQQSPAMIEPTVSNRKRRLAHLTLEEKQYRKKLKNRVAAQTSRDRKKQRMDELESSIVLMSQELEAMTKQNATLATENALLKQQLHDAQMTTTALLETLQSEKCSCGKSPKGNAQATPAELPSVSSRPAESTRHPLLKGLDGKQVDSLSVLRILLMTFLLSRSSLQTWDLVKISQTLETWSDLRKASSKKPLPVKRISQAWNQWWGRHQKSWNPVEEVPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -