Tpal003803.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thrips palmi
Gene Symbol
cnc
Assembly
GCA_012932325.1
Location
NW:2213115-2277157[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-17 8.3e-15 54.2 6.5 3 64 915 976 913 977 0.96

Sequence Information

Coding Sequence
ATGGCTTGGTGCAAGAAAGTGTGGCGAGAGGAGCTGCTCCAGTTGGCCCTCCTCCTCAGCCTGCTGGGTGTAGACAGGGACCTGTACCGGAGGAACTCGGAGTTCCACCCTGTGCGAATAGGCATTGACGATGTGGGTGGAGGTGTGCGATTTGAGAATGCGCAGTTTAACAACCCTTTCAACAACCGGATTGGACGGATGCATCCCAAGAGTCTGGATTCTGTGCTGCTGAATTATGAGAGGGACTTGATGGAAGATTTAAATGCCCTTGGGAGATACAACAGAATAGAGCCGCTAAACCACAACGTGACAGCTTATGTTTTGAATGTGGATGTGGGGAGCGTCAGGCTTGGAGCTCTCAGTTCTGCTGGAAACACAGAACCTGCTGATCCAGCACCAACTACAGCTTCTCCACCAGGATCGGAATTAACCCAAGAGGACATGGACCTGATCGAGGTCCTGTGGAAGCAGGACGTGGACTTGGGCTTCTCGCTCGAGTACTACAaccacaacaacaataacaacaacatcaacagtCCGGTCGCGGAGAAGCACTCGGCCTCCAATGACTCGTCGCCGGAGCCCTCGGCGTCGCAGAGCGGCACCAGCGACGAGCTCGAGAAGATCAAGATCCTGAACGAGCTGAACGCGCCGGAACCGGGCAAGGATGGCTGCCCCGCGGAGGTGGTGTGCAAGAAGGAGCGGCAGGACAGCGACGACGAGCTGGacccctgggccggcctgccctacACCGTGGACAGCGAGACAGGGGAGTACGTGGTCGCCGCCGGGTCGGACTCCGACGCTGACCCCCAGAGCTCCggggcgagggcctcgccgtcgtcgtcgacctCGTCGCTGGCCTcgttcggccgccggcgccatgACGACGCCACGGTGCCCGACCTCCACTacgacggcgacgtctcgGACCACAGCCGCCTGTCGTCGGCCaggtccacggcctcggcctcctcgtcgtccaaCGTCCAGGAGGACTTCCCGCTCGACGACGACCCGCTGCGGCTGTTTGAGCTGGAGGAGGACGCGTTTTCGCCCGACTTCAACCACGACGAGCTGGACCTGCTGACGCAGTTCGGCGGCTTCGGCGACCTCATGGACGAGGACGCAGACGACGAAGCGGAGGCGCGACCGCGGGCAGCGggccgcgcgccgtacGGTCGCGCCGTGAGCATGGAGCAGCGCTGGCAGGACTTGGCCAACTTGCtaagcctgccggccggccaacagCAGGAGATGCAGGCCCACgggcccgtgccgccgcaccaccatcaccaccaccatcaccaccaccaccacatccacggtggtgcggccggcgccgcgccgcagcccctgGGCGCGCACCACCCCCAGCACTACGGCTATgacggcgtccacgccggCGCGTCCCCCGCGCGCTCCGTGGTCCTGCACAACGccaccctggcgccgcccgtcGGCGACCTCAACAGCTCCAGCGTGTACTCCGGCCTGTCCATGGGCTCTGCGGTGGCGCAGTCCATGAACCTGACCAACAGCAGCGAGCCCATGGGCGACGGCTCGCCCACCAGCGCCTTCAAGATGGAGCCGCCCCACGACATGCTGTACTACCAAAACTCCTCGTCCGGCACCGAGATGGGCCAGCTGGCGCCgctcaacaccacgacggagGGCTTCTTGTCGTCCATCCTCAACGACGAGGACCTCCAGCTCATGGACATGATGAACGACAGCATGTACCCCCTGCGTATGCTGgacggggctgcgggggccgtgggcggaccgggcccgggggcggtgctgccgggggcggcgtcgggccTGATGGGCGCCACGCAGGTGTCGCAGGCGTCGCAggcgcagagcgacgagcggcTGGACGCGTCCAGCGACAGCGCCGTCAGCTCGATGGGCTccgagcgcgtcgcgtcgctgtcCGACGGCGGCGAGTGGATGGACGCGAGCTCGGACTCGGAGCACTACCAGATGGACGGCAAGTACCGCCCGGCCGGTAGCAGCCTGGCCAGCCACCACCCCAACGAGTACAGCGGGtactcgccgcaccgcgccgcgcccgccggcgtcgcgcagAAGAAGCACCAGATGTTCGGCAAGCGCTACCTCCAGGGCGAGCCTGCCACCGGAGGACTGCCGGTCGGTCCTGCTCCCGCCATGGCCACTCCGATGCCGCTCAAGTTGGActtcggcggcgaggcgtcgcggcccggcgccatgCCCGGCGCCATGCCCCAGCCTCAGGGCCCtcagggcggcgcgtcggcggcgccctcggccagcggcCTCGTCATGAACGGCTCCGTGGCCTCGGGGCTGGGCGTGTCCGCCATCGTGCCCTCCGGCGCCAGCGCCTTCAGCTCGCCGATGTCGCTGGACGAGGAGGAGCAGCGCGCCCACGACATCAAGTTCGGCTACTACGGCCACGAGTACCCCCGCCAGCACCATGCTCGGCCTCCAATGGAACCGGTGGCACACAACCACACCTACCATTTGCCACCACCTCCGGAGAGCTCGGGCTCAATTCAACGCCCCCTGCAAAGGGACAAGCCTTCCAAGTCACGCGACTCTCGCAGAAGCGACGATGCACACTTGTCGCGCGACGAGAAGCGTGCGCGAGCTCTGAACGTACCGATGGCTGTGGACGACATCATTAATTTACCCATGGACGAATTCAACGAACGGTTATCCAAGCATGACCTTAGTGAAGCGCAATTATCTCTTATCAGAGACATCCGTCGCCGTGGTAAAAACAAGGTGGCTGCCCAGAACTGCCGCAAGCGCAAGCTTGACCAAATTGTTTCTCTTGCCGATGAAGTTCAGCAAATGAGAAGTAGAAAGCAAAAGCTTCTTAGGGAACATGACTACCTCAACAGAGAAACTGCACTTGCCAAGGAAAAGTTCAGCCAATTTTACCGACATGTCTTCTCTGCCCTGCGAGATGCTGATGGCAACCCTTACTCTCCGTACGAGTacagcctgcagcagggccctGAGGGCAACGTAATGTTGGTGCCCTTGTCTTCCTccagccctgcaggggccAGCGGTCCCTCAGGCATGGCGCTCGACTCAGCCCACCAGCAGATGTCTCGCTCCATGTCACAGTCGCAGTCTCTGTCAGAGGCAGCAGTAGCCCCACAACCTCACCCCCACTACGTCAGGTTGTCCATGTCCTTGCCGCAGCATTCACTGCATCAACATGACCGACTTAAAGACCAACAAGCTCAGCACTCGCAGCAGCACCCCCATGCCCCCCACCctcacccccaccacccccacccccatcaccctcaccacccccaccacccccatcATCCGCACCACCCACACTCGGATCCCCATCACAAGGAGTGA
Protein Sequence
MAWCKKVWREELLQLALLLSLLGVDRDLYRRNSEFHPVRIGIDDVGGGVRFENAQFNNPFNNRIGRMHPKSLDSVLLNYERDLMEDLNALGRYNRIEPLNHNVTAYVLNVDVGSVRLGALSSAGNTEPADPAPTTASPPGSELTQEDMDLIEVLWKQDVDLGFSLEYYNHNNNNNNINSPVAEKHSASNDSSPEPSASQSGTSDELEKIKILNELNAPEPGKDGCPAEVVCKKERQDSDDELDPWAGLPYTVDSETGEYVVAAGSDSDADPQSSGARASPSSSTSSLASFGRRRHDDATVPDLHYDGDVSDHSRLSSARSTASASSSSNVQEDFPLDDDPLRLFELEEDAFSPDFNHDELDLLTQFGGFGDLMDEDADDEAEARPRAAGRAPYGRAVSMEQRWQDLANLLSLPAGQQQEMQAHGPVPPHHHHHHHHHHHHIHGGAAGAAPQPLGAHHPQHYGYDGVHAGASPARSVVLHNATLAPPVGDLNSSSVYSGLSMGSAVAQSMNLTNSSEPMGDGSPTSAFKMEPPHDMLYYQNSSSGTEMGQLAPLNTTTEGFLSSILNDEDLQLMDMMNDSMYPLRMLDGAAGAVGGPGPGAVLPGAASGLMGATQVSQASQAQSDERLDASSDSAVSSMGSERVASLSDGGEWMDASSDSEHYQMDGKYRPAGSSLASHHPNEYSGYSPHRAAPAGVAQKKHQMFGKRYLQGEPATGGLPVGPAPAMATPMPLKLDFGGEASRPGAMPGAMPQPQGPQGGASAAPSASGLVMNGSVASGLGVSAIVPSGASAFSSPMSLDEEEQRAHDIKFGYYGHEYPRQHHARPPMEPVAHNHTYHLPPPPESSGSIQRPLQRDKPSKSRDSRRSDDAHLSRDEKRARALNVPMAVDDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIVSLADEVQQMRSRKQKLLREHDYLNRETALAKEKFSQFYRHVFSALRDADGNPYSPYEYSLQQGPEGNVMLVPLSSSSPAGASGPSGMALDSAHQQMSRSMSQSQSLSEAAVAPQPHPHYVRLSMSLPQHSLHQHDRLKDQQAQHSQQHPHAPHPHPHHPHPHHPHHPHHPHHPHHPHSDPHHKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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