Ttri029256.2
Basic Information
- Insect
- Therioaphis trifolii
- Gene Symbol
- GATA-B
- Assembly
- GCA_027580255.1
- Location
- CM050407.1:37495345-37499351[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-18 1.3e-14 54.8 3.2 1 34 10 42 10 44 0.97 2 2 4.5e-19 3e-15 56.8 4.9 1 36 93 127 93 127 0.97
Sequence Information
- Coding Sequence
- ATGGAAATATTTTGCGAGGGTCGAGAGTGCGTGAATTGTGGAGCGATTTCCACGCCATTGTGGAGACGCGACGGCACCGGCCATTACTTGTGTAACGCTTGCGGACTTTACCACAAGATGAACGGAATGAACAGGCCCTTGGTGAAACAACCCAAACGGCTGGGTCCTCTGTATCATCATGTGCCCACGCCTTTCGCGAGGTCTTCCGGAGCCGGCGTACCCGAAGAGAAAACTACGAGAAGAATGTTAAATGCATCTAGACGTCAAGGGCTGCAGTGTACAAATTGCCAGACATCCAACACGTCGTTGTGGCGCAGAAATCAAGTGGGCGAACCCGTGTGTAACGCGTGCGGTCTGTACTATAAGTTGCACAATGTCAAGAGACCTCTTACAATGAAAAAGGACTCTATTCAGACGAGAAAGCGTAAACCAAAGAGTGGATCATCTAAAATGGAACCGGAACCTAAGAGAATAAAACGAGAAATGCCAGCTGAACATAACTACAGTGATTGTCACCGTACATCTGGCAGCATCTTAAATCACGGAAGTGCCAGTTCAGCTCTCGCGTATCCTAGCTTGTATCAGTCAGGCACACACATAACCCAGTACTATGACGTTATGAAAACCGAACCTTCCCAAGAGTCCATCAACAGCCCGCATATAGTTAGCCTTGCTTCTGCCAATAACAACAACAACAACAGTAACAAGAACAATAACAACAACAACACCAGCAACAAAGATAGACCCAGTGTCCTATCGATGTCAGTTATTTCCTAA
- Protein Sequence
- MEIFCEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPKRLGPLYHHVPTPFARSSGAGVPEEKTTRRMLNASRRQGLQCTNCQTSNTSLWRRNQVGEPVCNACGLYYKLHNVKRPLTMKKDSIQTRKRKPKSGSSKMEPEPKRIKREMPAEHNYSDCHRTSGSILNHGSASSALAYPSLYQSGTHITQYYDVMKTEPSQESINSPHIVSLASANNNNNNSNKNNNNNNTSNKDRPSVLSMSVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -