Basic Information

Insect: Therioaphis trifolii
Gene Symbol: Znf219_1
Assembly: GCA_027580255.1
Location: CM050406.1:21914352-21920644[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.01 1.5 10.7 1.3 1 23 101 124 101 124 0.96

2 18 0.0026 0.39 12.6 1.8 2 23 136 158 135 158 0.94

3 18 0.0054 0.8 11.6 1.0 1 23 541 563 541 563 0.98

4 18 2.7 4.1e+02 3.1 0.9 1 23 569 591 569 591 0.88

5 18 0.049 7.3 8.6 0.2 3 23 669 689 667 689 0.96

6 18 0.71 1e+02 4.9 7.3 1 23 695 717 695 717 0.93

7 18 0.24 36 6.4 6.2 2 23 769 791 766 791 0.92

8 18 0.83 1.2e+02 4.7 7.5 1 21 870 890 870 892 0.92

9 18 0.00016 0.024 16.4 0.3 1 23 1038 1060 1038 1060 0.98

10 18 0.00023 0.035 15.9 3.6 1 23 1065 1087 1065 1087 0.96

11 18 0.089 13 7.8 0.7 2 21 1123 1142 1122 1143 0.94

12 18 0.0084 1.2 11.0 2.4 1 23 1173 1196 1173 1196 0.95

13 18 9.6e-06 0.0014 20.2 4.2 2 23 1246 1268 1245 1268 0.96

14 18 8.9e-05 0.013 17.2 4.0 3 23 1277 1298 1275 1298 0.96

15 18 0.002 0.3 12.9 0.6 1 23 1329 1351 1329 1351 0.96

16 18 0.42 63 5.6 0.0 1 19 1356 1374 1356 1377 0.80

17 18 0.01 1.5 10.7 1.2 2 23 1405 1426 1404 1426 0.97

18 18 2.8e-05 0.0041 18.8 2.5 1 23 1432 1454 1432 1454 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.01	1.5	10.7	1.3	1	23	101	124	101	124	0.96
2	18	0.0026	0.39	12.6	1.8	2	23	136	158	135	158	0.94
3	18	0.0054	0.8	11.6	1.0	1	23	541	563	541	563	0.98
4	18	2.7	4.1e+02	3.1	0.9	1	23	569	591	569	591	0.88
5	18	0.049	7.3	8.6	0.2	3	23	669	689	667	689	0.96
6	18	0.71	1e+02	4.9	7.3	1	23	695	717	695	717	0.93
7	18	0.24	36	6.4	6.2	2	23	769	791	766	791	0.92
8	18	0.83	1.2e+02	4.7	7.5	1	21	870	890	870	892	0.92
9	18	0.00016	0.024	16.4	0.3	1	23	1038	1060	1038	1060	0.98
10	18	0.00023	0.035	15.9	3.6	1	23	1065	1087	1065	1087	0.96
11	18	0.089	13	7.8	0.7	2	21	1123	1142	1122	1143	0.94
12	18	0.0084	1.2	11.0	2.4	1	23	1173	1196	1173	1196	0.95
13	18	9.6e-06	0.0014	20.2	4.2	2	23	1246	1268	1245	1268	0.96
14	18	8.9e-05	0.013	17.2	4.0	3	23	1277	1298	1275	1298	0.96
15	18	0.002	0.3	12.9	0.6	1	23	1329	1351	1329	1351	0.96
16	18	0.42	63	5.6	0.0	1	19	1356	1374	1356	1377	0.80
17	18	0.01	1.5	10.7	1.2	2	23	1405	1426	1404	1426	0.97
18	18	2.8e-05	0.0041	18.8	2.5	1	23	1432	1454	1432	1454	0.99

Sequence Information

Coding Sequence: ATGGAAGGCTCAAATAGCATAGATGTTGCCTATGACTTCCGTGTTCAAGATACCAGTAATAAACCTATATGGCATTCAGAACTAGATAATTATGTACCTTTGACTACGGAAGATAATGAAAGAGTTATTAAAGTTGAACCACTTGATACTGGCTCTTTTGATGAATGTACGTCGGAAAGTAGAATTGATATTACAAAAGATAATGACCATCAAAATAGTACAGAAGTTCCTTTAACTAATCAGAATGTGCCTGAAAATAATCCAGACTTGAATGGTGACTACACAAATCATAACCAAACATTTTCTTGCGATATCTGTAAAAGTGAATTTGCTCTGCATGATCAATTAAAGACGCACATAGAAAAACAGCATAAAAAACCAACTCAATTAAATTTGAATGCTAATCAATGCAAATTTTGTGGGAAACAGTTCAAGTTAAAGTTTGTTTTGAATAGACACATTGAACAAAATCACTCAAACAAGATTGAATGTGAAATTTGCAAATCTATTGTTGAAAGATCCGTTTTTAATCAACATATACAAACCCATGAATGTGATTCTGATACAAAAATTAATTCTATACCGAATTTAAAACTCTGCAAATTAAATGGTGTTTGGAAAAGTAAACATAGCATTAACAAGTGCAAAATTTGTTTTCAAAAAAATTGCGTGTGTACAAATGTTATTAGAAGAAATAGTCCTGACATCATAGATATTGGTTCAGCAAACAGTAACCAATCAACTGTTCAAACTGTATCCTGTGTTTTAACGGCAAATAATAGCGGTATAAATGTAAGTTACGAAAATAGCCAGGGCACAAATGTCACAATAATTAATAATTCTGATCAAACAGAAACAGACACAGTGAGCAGCATTGAATCAGTTCAAAGTGTATTGCAAAACTCATCGGTAAATAATTTCATTATGAATATAAAAAAAGAAAAAGGCTTATGTTCAAATACTGCAGCAAGAAGTAGTTTCAATCAAATAGATGCAACTAACAGCAATAGATCAATCGTACAAAGTGTATCACCACATAATTCAGTAGTTAACGGTTTTGATGTGAATATGAAAAAAGAAAAAAACTCTTGTACGATTACCTCAGGAATAAATAATTTTGATCAATTACATACAGCCAATAACAGTGAATCTATTGCACAAACAATGAACACTTTTTCTTTAAATATAAAGAAAGAAAAAATCTTGAGCATGGAAAATAGTACGTCAAGTAATGGTTTAGAATATTTTGATGAAACTGATGAAACTGGCAGTGTTGATTCAACAGTACTAATTACATCCAGGAATCCAATTATGAATATCCGTCCTTTGAACATAAAAAAAGAAAAATGTTTACTCCAAAATGTGAATGAAAATAATAGTTCAGATCTACTAGATATTGTACCTCACAGAATTCATGAATTAAATGTACAAACTGTACCAGAAGTAAACATGGTAAGTAATATAAGGATAAAAAGAGAACCTGAAGATAATCATGATAGTATTTGTACAGTTAAGGAAGCCAAATATTTCTCCATAAAAAAATTGCCTAGTAATCAAAATATTTCTTTTAATTTTACCACCACTCAAAATCTTAGACAAACGTCTGACTGTAACATTATATATGTTTGTACTATTTGTAAAACGTCATCTGTAGATCTACATTCTTTTGCATTACACATGAGCTCTCATTTAGAATGCAGTATGCACGAATGTGTTGTGTGTGATCAAACATTTTTGACTGTACTTCTCTGGAAAAACCATATGACTTTTCATCAACATCAGGTAGATTTGAATTTATTGAATCCTGAAATTAATTCTCTAGATGTTGAACCTTATACCAATATCACTTCTGATTTGGAAAGCATGGAACCTGTAGCGCATTCTTCAACCTTAAGAAATAAAGAAAACAATTTTCCTGAATTAAATATTGACTTTAGAGACTCACCGACTTCAAACATTAATACAGTTAATAAACGTGTTCAAAAATACAAAAAATCATATGGCTGTGATATATGTAACATTATATTTCCTTCTAAACTTACATTTATGACTCATCAAACTCTTCATAATGAATCAAGACAATTTTGCTGTAAATACTGTGATAGAAAATTTTCCTCTAGAGGCCCATGTACAAATCATGAAAAGTCACATGACCCCAATGGGTATAAAAATGCAGTCAAAGGTATCAATCAATCAATTGAAACCCAAAACAACATAACAATAGAAAATAATCATATCATTAATGCTAATCCGATTTTGGCTACACGTAAGAAAAAGAAAGCATTATTGAAATCAAAATGTAATGTTTGTTATATTTGTCGAAAAAGATTTGCTAAGACTTGTTACTTAACAAACCACTTGAAATTACGACATCGTGTTAATCCAAAAACATCTAAAGAACATGTCGCTAATTCAAGAAATTCAAATGCAATCAATAATATAAATGGTAATAAGTCACTCAATGAATGTAAGAAAATGGAGTTACCTACAGTACTTGATACAAATTCATTCTTATTTGTGGATAGGATTTCTAATAACACTATTAGTGAAATCCCTTGTCAACAGAATAGTGTAACGAGTCCCATGACTTCTTATGTCAATAAAATTTATACATGCCAATATTGTAGTAAACAATTTAATCAGAAAAGTTCTCACTCAAATCACATCAAATGTCATCAGAATATAAGGGAAAAAAATAAAAGCATTAACAAAGCAAATACAGTTAAAGTGAAAATAGAAAGAAATGAAGAACATCAACAACAAAAAAACGGCAATAATTCTGAGTTTGATAATAGTTCATTTATTGAACCAAGTATTCCAAATTCAACAATGACTGCTGCTCTAACAGATCATGTAACTACTCATTCAAATCATGGACTCCACAAATGTAGATTTTGTAATAGAACATTTCTGAAGAAAAGCTCTCACTCTAATCACATCAAAACTCATAGTCATAAAAAATTTAAGCGTGTTAAACGTAAAAACTTAAATGTAATAAATATAGAAACAAATGGAGGACATCAACAAGAAGAAAACTTAAACGTTTCTGACTTTAATTGTTCATTAATTGAGCCAAATATTCCAATTTTAGCAAAGAAAAACCGTTTGTGGTTTCCTTGTGACGCATGTGAGAAAAAATTCTCTACTCCATTCCTCTTAGTTGTACACCGAAGGTCACATTGTATTGAACCTTATTTATGCAAAATTTGTAACAAGTCCTATACTGTGAGACATCAATGGAACAGACACTTAAAATCGCACTACTGGAGGAACATACTTAAAAATAAAAGTAATAATCAAACTAATGCCTCAGAATCAGCTACTAATGCATTACAACCTAAACCTGTACAACAGCAAAACCAGTTAAAATGTGGATATTGTAAAAATAAATACTACTCAATATCTCAATGGAAAAAACACATGTCGCTGAACAGGGAATGTCGTCGTCATTGTAAAAGTAGCCTTCCAAAGTTTACTACGAATCAAGCCAGAGAAAATTTTTCAAGATGTACGCGATTTGAATGTCATATTTGTAAGAATACATATAGTACTTTGTACAACCGAAAAGTACATCTCTTAAATGTTCATAATTTTTCAAATGTAGATTTGGAAACTAGTACAAGTACTGATGTCGTTAAACAAAAAAATATAATAAAGACAGAAAATATTCAACAGGATTCAAAATCGGTAAATAAAAAAAAAAGACGACTATTGATTTCTAGCGATAACAGCAATCAATGTCATATATGTGGTAAATGTTACAGCAACAGAGGTAATTTATATCGACATCAAACTGTTAGTCATTCAATGGAGGCTAATGTTGTAAATTGCAGCATTTGTAATAGGTCATTCAAACATAAATATTCATACCGAGAACATTTAAGATCTAAACACAGTCATTTATTAGAAAAAAATACGAGGAATACAGCAAAAGATGGAAAAAAAAGTAGACCATTGATGAAAAACAAAAATGACATCGCCCAATACTTGTGTAAAATTTGTAAAGTGGAGTTTTGTGACGATGTTGCACTACAGAATCATATAAAAATCCATACCCGTAATCAATATGCGTGTGTTGACTGTGGTCAGAAATTTGAGACAAATGCTATTTTGGGTGAACACATTTTAAATAGCAATTGTGCCAGTACTAAACTAAATGGTATCAATTTAACTGGAGTTAAAAAAACATCACGACCAATTAATGATAATTTGCAGTGTAAAATTTGTTTCAAAGTCGTAAAATGTGCTTGGTATTTAAAAGTTCACATGAGAATACACTCTGGTGCCAAACCATTTAAATGTGATATGTGTGACATGACCTTTAGGTTTAGACCGAATTTGAGGATACACAAGAGAAAACATAACCGACCTAAACCATCATCCTAA
Protein Sequence: MEGSNSIDVAYDFRVQDTSNKPIWHSELDNYVPLTTEDNERVIKVEPLDTGSFDECTSESRIDITKDNDHQNSTEVPLTNQNVPENNPDLNGDYTNHNQTFSCDICKSEFALHDQLKTHIEKQHKKPTQLNLNANQCKFCGKQFKLKFVLNRHIEQNHSNKIECEICKSIVERSVFNQHIQTHECDSDTKINSIPNLKLCKLNGVWKSKHSINKCKICFQKNCVCTNVIRRNSPDIIDIGSANSNQSTVQTVSCVLTANNSGINVSYENSQGTNVTIINNSDQTETDTVSSIESVQSVLQNSSVNNFIMNIKKEKGLCSNTAARSSFNQIDATNSNRSIVQSVSPHNSVVNGFDVNMKKEKNSCTITSGINNFDQLHTANNSESIAQTMNTFSLNIKKEKILSMENSTSSNGLEYFDETDETGSVDSTVLITSRNPIMNIRPLNIKKEKCLLQNVNENNSSDLLDIVPHRIHELNVQTVPEVNMVSNIRIKREPEDNHDSICTVKEAKYFSIKKLPSNQNISFNFTTTQNLRQTSDCNIIYVCTICKTSSVDLHSFALHMSSHLECSMHECVVCDQTFLTVLLWKNHMTFHQHQVDLNLLNPEINSLDVEPYTNITSDLESMEPVAHSSTLRNKENNFPELNIDFRDSPTSNINTVNKRVQKYKKSYGCDICNIIFPSKLTFMTHQTLHNESRQFCCKYCDRKFSSRGPCTNHEKSHDPNGYKNAVKGINQSIETQNNITIENNHIINANPILATRKKKKALLKSKCNVCYICRKRFAKTCYLTNHLKLRHRVNPKTSKEHVANSRNSNAINNINGNKSLNECKKMELPTVLDTNSFLFVDRISNNTISEIPCQQNSVTSPMTSYVNKIYTCQYCSKQFNQKSSHSNHIKCHQNIREKNKSINKANTVKVKIERNEEHQQQKNGNNSEFDNSSFIEPSIPNSTMTAALTDHVTTHSNHGLHKCRFCNRTFLKKSSHSNHIKTHSHKKFKRVKRKNLNVINIETNGGHQQEENLNVSDFNCSLIEPNIPILAKKNRLWFPCDACEKKFSTPFLLVVHRRSHCIEPYLCKICNKSYTVRHQWNRHLKSHYWRNILKNKSNNQTNASESATNALQPKPVQQQNQLKCGYCKNKYYSISQWKKHMSLNRECRRHCKSSLPKFTTNQARENFSRCTRFECHICKNTYSTLYNRKVHLLNVHNFSNVDLETSTSTDVVKQKNIIKTENIQQDSKSVNKKKRRLLISSDNSNQCHICGKCYSNRGNLYRHQTVSHSMEANVVNCSICNRSFKHKYSYREHLRSKHSHLLEKNTRNTAKDGKKSRPLMKNKNDIAQYLCKICKVEFCDDVALQNHIKIHTRNQYACVDCGQKFETNAILGEHILNSNCASTKLNGINLTGVKKTSRPINDNLQCKICFKVVKCAWYLKVHMRIHSGAKPFKCDMCDMTFRFRPNLRIHKRKHNRPKPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01434341;
90% Identity: -
80% Identity: -