Basic Information

Insect: Therioaphis trifolii
Gene Symbol: TIGD6
Assembly: GCA_027580255.1
Location: CM050404.1:37764086-37766063[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-10 9.2e-08 33.0 0.1 1 38 14 52 14 55 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-10	9.2e-08	33.0	0.1	1	38	14	52	14	55	0.92

Sequence Information

Coding Sequence: ATGGGAAAGTATAAGAGAAAAACCAATAGGCAAAGCTGGTCTGAGGAATCGATGAAAAATGCAATTATGTCTGTCATAAACAAAGTTATGGGGTATAAAAAAGCATCAATGGCTTATGGTGTGCCTCAAACAACCTTAGAAAATAGAGTGAAAAAGTATAAGCAATGCGATTTTAAACTTGAAAAAGCTGTAGAAAAAACTTTGGGAAGTATTAAGCCAGTATTTACTATAGAGCAAGAAAAAGACTTGGTAAAACATATTTTGAAAATGGAAGAAGTACTATATGGGTTAACTATCAAAGATGTACGTTCTTTAGCATTTCAACTGGCTGAAAGTAATAAGTTACCAAACAACTTCAATCGAGTCAACCAATTAGCAGGGAAATCTTGGGTGTATAGTTTTTTTAAAAGACATCCTGAATTATCACTCCGTACACCTGAAAGAACATCAGCAGCTCGTGCTCAAGGATTTAACAAAATAACTGTTGGTAATTATTTTAATTTATTAAATAGTTTGTTTGAAAAATACCAGTTTTCACCTGATAAAATATTTAACGTTGATGAAACTGGTATTACAACTTGCCCAAAGAAAATGTCTAAAATTGTTGGCCAATGTGGTAAAAAACAAATTGGTGGTATAACATCTGGTGAACGTGGTGTACTAACAACTATAATTATGTGTATGAACGCAGCCGGAAATTATATGCCACCACATTTTATTATACCTCGACAAAGACCAGTGCCTGGTATCTTGGACGATGCTCCACCTGGATCCACAGTTTCTTTTCACCCTTCAGGATGGATTCAAACTTCTATATTTAATGATTGGTTTGATGAGTTTTTATTATTTTCCAAACCTTCAATAGATAAACCTGTGCTATTGTTATTGGATGGACATGCCACTCATGTCAAAAATATTGATTTAATTACAAAAGCAAGAGAAAATCATGTCCATTTGTTATGTTTCCCCCCACATACCACACACCGCCTTCAACCTCTTGATGTGTCTTTAATGTACCCGCTTAGTACATATTATTCAGAAGAAGTACGAAAATGGCATGTAAATCATCCTGGTAGAGTGGTTACTGTACATCAAATTCCTAAACTATTCAAACCATCATTTTTAAAAGCATGTTCAATGGAAACTGCAGTTAATGGATTTGAAAAAACAGGAATTTGTCCAATCAATCCGGATATATTTCCAGAGTGGATGTTTGCTCCAGCAGAAACCACAGACATTCCTAATGTACCTGATGTTCCTAATGCTGATGCTGATACTTCTGATAATACTGTTATTAAAGAACAATCATTACAGAATGAAGAAACATTGCCTTTAAAAATTTTAACAGTGTCCGGTCAATCTCAGAATAATGATTGTAATAAGTTGCTTGGTCATTCGGAATATGTAAATGAAAATAACTCTTCAATTTCTATTGGAGAAAATCCTGGAACAAGTGGAACTCAACAAAATGTATCAATTAATATTTCAGACTCTCTAAGCACACCATCTTCAGCAAAATCCAACAACTTTTTACAAAAGTCACCTAAAGATATAATTCCAATTCCAAAAATATCGGGAATAACCAAACGTGTATCAAAAAATAGAGGGAAAACTGCAATATTAACTGAATCTCCTTACAAGCGAGAACTAGAGAAAATGAAAAGTTTAAGTACTCCCAAGATTGTTTCAAAATTAAATTTTAACTCAAAATCAAAATCCAAAAGACTGCAACAGAAACCAAAGAAAAGACTGACAAAAAAATTAGATGATAATGATGATGCTATATGCCCGGCTTGTTCGGATCAAAATGTTGTTGATAGCTGGGTCAAGTGTAACGAGTGTAATGTTTGGTGGCATGAAAAATGTACCGCCTATATCCAAGGGGCATTTATCTGTGACTATTGTTAA
Protein Sequence: MGKYKRKTNRQSWSEESMKNAIMSVINKVMGYKKASMAYGVPQTTLENRVKKYKQCDFKLEKAVEKTLGSIKPVFTIEQEKDLVKHILKMEEVLYGLTIKDVRSLAFQLAESNKLPNNFNRVNQLAGKSWVYSFFKRHPELSLRTPERTSAARAQGFNKITVGNYFNLLNSLFEKYQFSPDKIFNVDETGITTCPKKMSKIVGQCGKKQIGGITSGERGVLTTIIMCMNAAGNYMPPHFIIPRQRPVPGILDDAPPGSTVSFHPSGWIQTSIFNDWFDEFLLFSKPSIDKPVLLLLDGHATHVKNIDLITKARENHVHLLCFPPHTTHRLQPLDVSLMYPLSTYYSEEVRKWHVNHPGRVVTVHQIPKLFKPSFLKACSMETAVNGFEKTGICPINPDIFPEWMFAPAETTDIPNVPDVPNADADTSDNTVIKEQSLQNEETLPLKILTVSGQSQNNDCNKLLGHSEYVNENNSSISIGENPGTSGTQQNVSINISDSLSTPSSAKSNNFLQKSPKDIIPIPKISGITKRVSKNRGKTAILTESPYKRELEKMKSLSTPKIVSKLNFNSKSKSKRLQQKPKKRLTKKLDDNDDAICPACSDQNVVDSWVKCNECNVWWHEKCTAYIQGAFICDYC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01432980;
90% Identity: iTF_01432980;
80% Identity: -