Ttri024506.1
Basic Information
- Insect
- Therioaphis trifolii
- Gene Symbol
- JARID2
- Assembly
- GCA_027580255.1
- Location
- CM050411.1:13900829-13921829[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-20 2.5e-16 61.1 0.0 8 89 1565 1644 1559 1644 0.92 2 2 3.5 2.3e+04 -2.8 0.0 49 64 1658 1671 1654 1694 0.79
Sequence Information
- Coding Sequence
- ATGTCTTCGAATGGGTCAGACGCTAAGAAGCGAAAACTCGTGAACAATGAAGAAGCTATTCTTGAATCGAGTACAAAAAAAATCAAGGTACAAGCTCAGCGTAAATTTGCCCAAAATGCTGTGACACCCACCAGTACTCCTCAAAAACCTATTCAGACTCAAGTGGTGCCTACAAATGCAATTAAACCACCCATAAAACGACCAAATACTGAAGACTTCCTTACTTTCCTTTGTTTTAGAGGTACAAGTTTATTACCACCGCGGTTAGATTTCTTTAATAAACCTCAACGTTCTCCACAAGACATTGCTGCTGGAAAGAAAAGAAGAAAAAGCACTCCTGTACTGCCAGTGACAAATGTCAATAATGTAAATAATGAACAAAATGAAAAAAAAAATATAAGACCACTGACTAAGTTACCACAGACTAAATATTCAATATCTAAACTAGGACAAAAAGTTATTGGTCGAAATTTGGTACGGTCCAGTTCAAGATATACTGTTAGACAAGAAGCTATCACCCTACGCCAAATAGCTCTTCGTCATGGTTCTAAAATCAAATCAAATTCAAAAGTTCAAAAACCTCCAATTAAAGAAAATATTAAAAAAGAAACTAAGAAAAATGGAAAACAAGCATCATCTGATGGTAAACAAATACAGAAGTTGAAAGGCCGTATAACCAGATCTAATTCTTTACCGAGTTTATTTTGTCCTGCACTAAATCAGCTTCGAGATGACAAAGGTAAATGGTGTAAGGGTGGTAGTAAATCTTCTAAGACATCTGAAGACTCAAAGGATGTTGAAGAAGATAGACCATCGAGAAAAAAGACTGCAATAAAAAATTTAGATCATAGAAGTAACAGTCTCGGTAACTTGAAACAAAAAAATAGTGTTACTAAATGTAAAGTATCAAATAAAAATGGTAGAAAGACTAGAAGTTTAGCAAGTAAATATAAGAGCAGCGACCACGACAATTATGTTGTTCCTGATAAAAAGTGTGATAAGAATATGAAGACTGTATCAAAGAGTAACAAAGCAAACAGTTTAGTTGAAACAAAATGTTCGGTTGATGTGAAAAGAAGAACATCTTCAGTGGATAATATGAAAACCAGCCTGGAGAATAAAGATACAATCAGTACTACTCGTTCAAGGCCTCCTAGAAGAACAAAAGAAGCAGCTACTTTATTTATGGAAATGTTACGAAAAGATATGCGGTGTCCTGATGAGCAAGAAGAAGATGACACATCATCTGTCGAGAGTTTTCCTGAACTTCCTAACTCACGTATAAATGAACAACGTGAACGTGAATTGAAAGTTTTTTCCAAGAAAAATAATATTGAGAAACAACTTAATGAACAACAGCTACTTGAAAATAAAGATAATAACCGTTCATTGTCAGAGCTTGAGAATAAAAAGACTGGAGTTGACAAAAAGAAGGTTAAAGAAGAGAAAAAAGCTGAGGCAAAAACACTAGTAAAAAAAAAAATGAAAGAAGTGGTACCCACGATTGCTAATACTGAAAATGGTGGAACAACATCATTTAAAAGGAATCTGAGGCCTCGTCGTTCATCCACCATGCTAGATGATTATATCATGACTGATTCAGAAGAAGACAATGAGACTTGTGAACCTGTAACCAAGGAGAATAAATATGAAGCCCCTAAATCATTATCCAAAATTACTTTGATAGGGGATTCAAAAATGCAAAAAATTAAGTCAAGTGCTGAGGAATCTGATAAAAAAAATCTTAAAATGAATAAGACTGACTTGAAACCGAAAAAAGATTTGAATAAAATAGATTCTGAAGTAAAAAAGAGTCTTTCTGAAACTAAGTCAAAAAGTATTTTTTTTAAATGTTATAAAGAGCCTGAAATCAAGAATAGTAAAAATACTTCTGTTGATAAGAAAACCGAGAAATCATCAAAAAATAAGACTGAAATTATAGAAATTATTAAAGAACCAAAAAATATTATTGGTGGTTCTAAAAACACTGGAAAAAAAGTGCCACTCCCTAATAAACAGCCGTCGACAAAAGAAGAAATTGTATCGAACAAGAAAAAATCCAAATTAGATTTATATAACAATAATAAAAAAAAAGTAAAGTCTACGTCGTCGTCGTCGCCTGTGACATCTTCTATGTATAGCAGTATCACTAGTCAAACAAAAGATGGGCTTTTAGAGCACATGGCTGCAAATTTTGATGCCAAATCTACTGCCAGTGAGGATGTTGAAAAAGTTCCCAACAGCGTGATAGGAACTACAACTTCAGAAAACAATGCTATAACCACAGAAAAGAAGGCACAAAACAGTACAATGAAAAAAAAGGTAGAAAGCAGTACACCGGAAAGAAAAGTTGACAGCAATACGACAAAAAAAAATACAGAAAGTATTATGGTGGGAAAAAAATCAGAAAGCAGTTCGCTGAAAAAAAAATCAGAAAACACTACGATAAAAAAGAAAGTGGAAAATAGCATTATTGAAAAAAAGATGGAAACCAACTTGATAGAAAAAAATCTAGGAAATAGTTCTGTGGTAGAAAAAAAACTGGACACTAATGAAGCTAAAGCTGTTAGTAATAAATCGGTACAGTATAAACAAGAATTAAAAAAAGTGTCGAAAACAGAAAATGTTGTGGCTGTCACAAAAGAGGAAAACGTAACTTCAGGAAAAGTTGAAAATGATGTTAAGGTTATCGATAAGTTGGAGAAAATTGAGTCATTGGTACCATTGAATAAAGTGGAAAAAGTCGAAAATATCATGACCTTTGCCAAAGATTTGTTTATGGGTCAGCAGAAAGAGATAAAGATTACTATGCCTGAGTACTTTACTGGTAAAAACTTTCAGCTGCCAAATAGGTTTAAACAAGATGATGGTTTGTCTGTGTTGTCAGAGATCTGCAGTGCTTTACCGAGGTTCAATGAACCATTCGTATCTAACAGACTACTACTAAACAAGTTGCCATCGTCAAGTGAGAGTAGCTTTGTTAAATATGCGCCATTGTCTAGCAATGGCGATGAGAAGAAAGAAGAAAAATCTCAAACGCTGGTTCCACCATCTTTCGAAAGTCGTACCATGAAAATGGTTAACTTAGCACGAGGCAATAGTGCTGTTGCTGCAACAACCAATAAAAAGGATTTGACTGCGTCATGGAGACAGGCATTTAAAAATGTTAAGTTATCGAAAAACGGACTTGCTTCCACTGCTGTTTCAGTCAGTAACAATTTGATGGCATGGACAAAAAAGAAGCAAAATAATAGTCAATCTTTGACAGCTAAAACTGATAGTGTCGATAATGGTGTCTTAAAAGAAACTATTTTCAGCAATGATATTATGAACAATAGTAACCAGTCACCTTTGGTAAACGGTACCATAGAAAAAAAATCCGAATCTTATTTGTGCCAAAAAACTAGCGGTGAATCAAAATCCACTGAACTGCTCGAAGGCAAAAAAGTTGCCGCTGCTGCTTCTAATGCATCTTATTTGGCCAAGACAACTATACTAAATAGTACAAAATATGACCTGAAATTTGAAAAACGTTCCTCTTCTACATCAACAGCAGCAACAACCACAATTTCAAGCATAGAAAAACAACAGCAGCGTAAAGAAGTTGTTGGTGACATAGCATCTTCTGATGATCAAAGCCCAGAAAAGAAGATATTTCATCAGAGGCGACTGTCTACCAATCAGTCGTGTAGCGGAAATAGTTCTGATGCCTTTTCCCCTGATAATGAAACTAGCGTTTATGCTTTTCAACCTGACTTGCCGGTAGCGAGCACTCCTTTCCGCCGAAACAAACCACAATCGCCTGCTAAATCTAGGACTGTTTCGCCCAATACATCTATTGCTGTAAGTATAGAGAACGATTCGATGGAAGAAAAATCTCATCAATCTGCTGTTTCATCAATAACAGACATGGACAGTGAGGAAGGACGATTGTTCTACATTCCTTTGCCAGCTGGTGTTCAAGCTCAACCATTGATTCAGGGTGTCACAGTCAAATTGGGTACGGAAGGACCTCAAAATAAATTGGTGATGAGCGCTAAGTTGGTTACTAAACCCCCTGCGTCTACCATACCAGTTAGTTCCATATCGCCTAAACCTGAGCGAAAAATTAAGCCATTGTGCACGACCAAAATCACCAATAGTACAACCCCTGTCGGCACTGTACAACCAACCACTAGAACAGTTCAGCCTCCCAAGTGTACCCCCTCAACTTCGAAACAAGTGTTACCATTATTATTACAACCTCAAATCTCGGAAACTAAAGATGAAAAAAAACGGTTACATCAAATTACTTCTACTGCCATTACTACTAAGGAATCAAAAAAATCGTCAATATCATTTTCGTCTTCTGTTTCCGTAACTGATACTAAGAAATCAAAAAAGACTGAAAAACAAGTTAATAACAAGAGAAAATCTAGTGAAAAAGTGGCTTCCAAAAAGAAATCCTTGAAAGAGTGTGCTGACATTTTGGAAGCACCAACATTTTATCCGTCTGAAGAAGACTTCAAAGATCCATTGGAGTATTTTGAAATTGTAAAGCCCATTGCTCAAAAATACGGTATATGTAAGGTTGTGCCACCACCTAGTTTTAAGCCGGAATGTAAAGTCAGCGACGACATGAGGTTCACGGCTTATAATCAGTATGTGCACAAGATGATGAATCGGTGGGGTCCAAATGTTCGTGAAATGATAGCCATAAAGAAGTACTTGGAAACCCAATCTATTGTATTGTCTAATCCACCCCTTATTGGGGGTATGGAATTGGATTTACCAAGGCTATACCACACTGTACAAGAGCTTGGCGGACTGAAGGAAGTAATAGAGTTGGACAAGTGGTGTCGTGTTGCTGACTTAATGAAGATACCAAGAAGTGCCCAAGACCGCGTTAGTAAACTTGATGACATCTATTGCAAATATCTGTTGCCTTATGATACGCTATCACACGATGAACGGCAAAAGTTAATAGCTGAAGTGGACAAAGAGTGGAAACAGATATGTAAGAAAGGAGATGTGGAAGACGATTTATTTGAGGACGTGAACGATTGTATAACAAAGGGCCGTAGTATCGCGCTGAGTGCTTATTACCGGGTGGCGCGTAACACTGTCGCCATGTGGTTCAAAGaacagcaacagcaatcacacggcggcggcggtagtggcagcggcggcggcggcggaggaggcagtggAAACTCGTCCGCGTCGTCCAAGATGTGCACCGCGACTGTCCGGCCCGAAGACGTAGAGTCGTTCTACTGGAAGCAGGTGCTGGAGAAAAAGAACCACATATGCGTGCTGTCCGGGTCAATCGACTCGGGGGCCGAGGGTTACGGATTCCCGACCACCAAGACGGCTACGTTCACCAAACACCCGTGGAATCTAAAAGTGCTGACCAACAATCCGGTGTCGGTGCTCAAGTCGCTGGGCCCCGTGATGGGCATGACCGTACCCACCATCCACATGGGCATGGTGTTTTCGGCCTGCTGCTGGTACAAGGACCCTCACGGGCTGCCGTGGATCGAGTACCTGCACACGGGTGCGGACAAGGTGTGGTACGGCGTGCCGTCCGGCCAAAGCAACCGGTTCCGCGCGGCTATGAAGCGGCTGCTGCCGCGCGCCGTAGCCGAGGGCCGCAACCATCACACGTGGCTGGCCGCGGACAGTGGCATGGTGCCGCCCGACCGGTTGCTCGAGCATGGCGTCCCCGTCACGCGGACCGTGCAGAATCCCGGCCAGTTCCTGATCGTCATGCCACGCGCGTTCACATGCAACATATCGACCGGCTACGTGATCTCCGAGAGCGTTTACTTCACCCAGCCCGGCTGGCTGGACGACGCCGAGAAAATCTTCCAGGACTTGCAAAGAAACTGCGAACCAGCCGCGTTTTCATTAGAAAAGTTATTGATCAACATGTCAACAGATCCTCGTACACCGCAAAACCTACTTAAACAGCTGTTGAACATATTAAGCAACATGAGAGACTGTGAAGTGGCTCTCAGAAGTCAGCTAGTTGAGGATTTGGGCCTAAAGGCATCCGAACGCATTCGGCCCCCAAAATCAAATGAACAAAATGATGATTATGAGTGTGATATTTGCCATTCAATTCTTTACATATCAATGGTGAAAAACTCTCACGAAGACTGTGACTATTGTCTTAGACATGGCATTGAGATGTTATCGAAAAAACATAATCAACTCAAGTACTGCAAGTTTTTGTACATTTTTGATGAGACCGAATTGGATTTGATACTAGTAAAACTACGCGAGCGAATTGATTCGAAGAAAAAGAAGACGTCTACAAAATGTTGA
- Protein Sequence
- MSSNGSDAKKRKLVNNEEAILESSTKKIKVQAQRKFAQNAVTPTSTPQKPIQTQVVPTNAIKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSPQDIAAGKKRRKSTPVLPVTNVNNVNNEQNEKKNIRPLTKLPQTKYSISKLGQKVIGRNLVRSSSRYTVRQEAITLRQIALRHGSKIKSNSKVQKPPIKENIKKETKKNGKQASSDGKQIQKLKGRITRSNSLPSLFCPALNQLRDDKGKWCKGGSKSSKTSEDSKDVEEDRPSRKKTAIKNLDHRSNSLGNLKQKNSVTKCKVSNKNGRKTRSLASKYKSSDHDNYVVPDKKCDKNMKTVSKSNKANSLVETKCSVDVKRRTSSVDNMKTSLENKDTISTTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDDTSSVESFPELPNSRINEQRERELKVFSKKNNIEKQLNEQQLLENKDNNRSLSELENKKTGVDKKKVKEEKKAEAKTLVKKKMKEVVPTIANTENGGTTSFKRNLRPRRSSTMLDDYIMTDSEEDNETCEPVTKENKYEAPKSLSKITLIGDSKMQKIKSSAEESDKKNLKMNKTDLKPKKDLNKIDSEVKKSLSETKSKSIFFKCYKEPEIKNSKNTSVDKKTEKSSKNKTEIIEIIKEPKNIIGGSKNTGKKVPLPNKQPSTKEEIVSNKKKSKLDLYNNNKKKVKSTSSSSPVTSSMYSSITSQTKDGLLEHMAANFDAKSTASEDVEKVPNSVIGTTTSENNAITTEKKAQNSTMKKKVESSTPERKVDSNTTKKNTESIMVGKKSESSSLKKKSENTTIKKKVENSIIEKKMETNLIEKNLGNSSVVEKKLDTNEAKAVSNKSVQYKQELKKVSKTENVVAVTKEENVTSGKVENDVKVIDKLEKIESLVPLNKVEKVENIMTFAKDLFMGQQKEIKITMPEYFTGKNFQLPNRFKQDDGLSVLSEICSALPRFNEPFVSNRLLLNKLPSSSESSFVKYAPLSSNGDEKKEEKSQTLVPPSFESRTMKMVNLARGNSAVAATTNKKDLTASWRQAFKNVKLSKNGLASTAVSVSNNLMAWTKKKQNNSQSLTAKTDSVDNGVLKETIFSNDIMNNSNQSPLVNGTIEKKSESYLCQKTSGESKSTELLEGKKVAAAASNASYLAKTTILNSTKYDLKFEKRSSSTSTAATTTISSIEKQQQRKEVVGDIASSDDQSPEKKIFHQRRLSTNQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSAVSSITDMDSEEGRLFYIPLPAGVQAQPLIQGVTVKLGTEGPQNKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKITNSTTPVGTVQPTTRTVQPPKCTPSTSKQVLPLLLQPQISETKDEKKRLHQITSTAITTKESKKSSISFSSSVSVTDTKKSKKTEKQVNNKRKSSEKVASKKKSLKECADILEAPTFYPSEEDFKDPLEYFEIVKPIAQKYGICKVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMIAIKKYLETQSIVLSNPPLIGGMELDLPRLYHTVQELGGLKEVIELDKWCRVADLMKIPRSAQDRVSKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDVEDDLFEDVNDCITKGRSIALSAYYRVARNTVAMWFKEQQQQSHGGGGSGSGGGGGGGSGNSSASSKMCTATVRPEDVESFYWKQVLEKKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSGQSNRFRAAMKRLLPRAVAEGRNHHTWLAADSGMVPPDRLLEHGVPVTRTVQNPGQFLIVMPRAFTCNISTGYVISESVYFTQPGWLDDAEKIFQDLQRNCEPAAFSLEKLLINMSTDPRTPQNLLKQLLNILSNMRDCEVALRSQLVEDLGLKASERIRPPKSNEQNDDYECDICHSILYISMVKNSHEDCDYCLRHGIEMLSKKHNQLKYCKFLYIFDETELDLILVKLRERIDSKKKKTSTKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -