Tuni052379.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465284.1:2661857-2664061[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.5 1.4e+02 5.2 1.5 2 23 73 94 73 94 0.96 2 13 0.002 0.58 12.7 0.3 2 23 145 167 145 167 0.96 3 13 0.13 36 7.1 3.4 1 20 173 192 173 194 0.91 4 13 0.18 52 6.6 0.9 1 23 205 227 205 227 0.92 5 13 0.00088 0.25 13.8 0.9 2 23 299 320 298 320 0.97 6 13 0.081 23 7.7 0.7 2 19 327 344 326 344 0.92 7 13 0.026 7.6 9.2 0.5 2 23 358 378 357 378 0.97 8 13 0.068 20 7.9 1.4 3 23 410 430 409 430 0.95 9 13 0.005 1.4 11.5 0.6 2 23 554 575 554 575 0.96 10 13 2.3 6.6e+02 3.1 2.7 1 19 581 599 581 602 0.93 11 13 7.2e-06 0.0021 20.4 3.9 1 23 627 649 627 649 0.98 12 13 0.0074 2.1 10.9 1.1 1 21 655 675 655 676 0.93 13 13 0.0001 0.03 16.8 2.1 2 23 687 708 686 708 0.97
Sequence Information
- Coding Sequence
- ATGGATGGAAATCAATTGATAAAAGGTCGTAAAAAGGAGGTGGTAGTAATTGAGAACTTACGAGTGGATGGAGAAGATCCAAAATCCTTCGTGTTAGTCGACACACAAACATTTACTATTGAATATCTAGATGAACCAGATGTAAATTTACCAGAATCATTAACAGAAGATGCAATTGGTGAAGATGGTGAAGTACCGCGAGGCACTTCTAGTGCAAAATGTGCTATATGCAGCCGATGCTATATATCGGTTATCGACAAGAAGAGGCATGAACTAAGCCATTTTGAAATTAAGCCGTATACATGTCAATTTTGTTCAAGATTATACATATTAAGCTCGAAGTATTATACTCATGTTTGCTTAAGACATCAGAAACATCGAATCCATCCAGGTTATAAGAATAATACAAAACAAATTGGGAATAATCAGGCTTATTGTCACATATGCGAGGAAATATTTGATAATGTTAGAGAGCTGCAGGAGCATGAAAGGATCTTGCACACAAGGGAGTTGCCGTATGATTGTAAAGTATGCCAGCAAAGATTTTCTACTAGCAATGAAAGAAACTATCATTATTGCAATATATCGATAGATCATAATAAAACAGACACGTTTCCATGTAAAAAAtgctctaaatattttttagattttgaagcATTAAATTCGCATTCTCTCGAGCATTTTATTGATGATGGTTGCGGCTTTCTCGGTGTTAATGATGCTATTATAAAAGAGCATTGGGAGAAGTTACAAGAACATTCAAAACAACAATTAGATGATCAACAATTAGATGATAATAACTTACTTATAGAAGATAGTAGTAATCCATTAAATAACTTAATAGAAATTGTTTCTGACAACGGCAGTATTATTGATGGTGATGATCCAACTGTAAAGTGCGATATTTgctataaaaattttcaaactgaGCTTGAATTGCGTCGGCATCAAGTTAAACATTTCACTTTTAAACCGAAAAAATGTGATAAATGCACAAAATCATTTGTTCTTACCTCAGATTTTGCTATGCAtgattgtatgaaaaattatattttaaggGATCCAAGAAAGAAATGCAATATTTGCTATACTAGTTTCCTTTTACCAAATCTTAAAGTTCACGAACGTATACATACTGGTGAAGTTTTATTTTCGAAATCCGGACTGTTTAGTGGAACACTAAGGAATGTTAAAGAGAACAACCAAGGTATTTATGAGAGAAATAACTGTTTTGTATGCCCGAAAGCATTTAATAGCTTAAGGCAGCGAGATATTCACATGCTGCATCACTATGTTGAGGATAAtacatatgagtatttgttAAAAGATACTTTAAATAGATTAATAAAGAATGACTATGATACTAATAAGGATGACTTAACACCTGCATTCACCAATAAAGAAGATTTAACCACCGAATTTATTATTCAAAACGATTTAACTACCACTGAATTGATTGAAATAGATGATTCCTCTGATGATGATTACACTGATACAAATAACTTATCTCAGGAATACATTGGAAACGATGATATAACTTCTACCAACTCAAACGATAGCTTTAGCGATAATTTAGACACATCAAGAGATGCCCAGTCACCCTTAAATCCATCCGCATTTCTTACAAGCATTGGCATAACACCAAATCACCCAGAAGAACAATGTGGTATTTGTTATAAAAGCTTTGGATATAAATCCGAGAGACAATTGCATCAATTAGATCATTTCGGCATAACTCCATATCGTTGTGAATTTTGCTCAGCATATTTTGCATTGAGCTCCCAATATTATAATCATAGTTGTTCAAAAGTGGCAAGAGGCGTTCGTAATCATCCCCGACCAAATGCTACtgtaacaaaatataaaaatatgcgCGGTTTTGTTTGTCATATTTGTTGGAAAACATTTCGAAGATTTGATACGCTTAGAAGACATGAAACTACCCATACGGGCGAGAGACCGTTTAAATGCAAAGCTTGTGGTAAATTATTCTCGCAATGGTCTGGAAAGGATCGGCATCTATGTATTAGaaataatgataaaaaattagtTGATACAACTTGCGGTAAATGTGggagaatatttaaaaattcgAAATATTTGGAAATACATGAACACACGCATTATTTTGTTGGGCAaactaattttaataatttacctGATTTATATTCAATGGATTTTGATAATGAAGctgaaattaattga
- Protein Sequence
- MDGNQLIKGRKKEVVVIENLRVDGEDPKSFVLVDTQTFTIEYLDEPDVNLPESLTEDAIGEDGEVPRGTSSAKCAICSRCYISVIDKKRHELSHFEIKPYTCQFCSRLYILSSKYYTHVCLRHQKHRIHPGYKNNTKQIGNNQAYCHICEEIFDNVRELQEHERILHTRELPYDCKVCQQRFSTSNERNYHYCNISIDHNKTDTFPCKKCSKYFLDFEALNSHSLEHFIDDGCGFLGVNDAIIKEHWEKLQEHSKQQLDDQQLDDNNLLIEDSSNPLNNLIEIVSDNGSIIDGDDPTVKCDICYKNFQTELELRRHQVKHFTFKPKKCDKCTKSFVLTSDFAMHDCMKNYILRDPRKKCNICYTSFLLPNLKVHERIHTGEVLFSKSGLFSGTLRNVKENNQGIYERNNCFVCPKAFNSLRQRDIHMLHHYVEDNTYEYLLKDTLNRLIKNDYDTNKDDLTPAFTNKEDLTTEFIIQNDLTTTELIEIDDSSDDDYTDTNNLSQEYIGNDDITSTNSNDSFSDNLDTSRDAQSPLNPSAFLTSIGITPNHPEEQCGICYKSFGYKSERQLHQLDHFGITPYRCEFCSAYFALSSQYYNHSCSKVARGVRNHPRPNATVTKYKNMRGFVCHICWKTFRRFDTLRRHETTHTGERPFKCKACGKLFSQWSGKDRHLCIRNNDKKLVDTTCGKCGRIFKNSKYLEIHEHTHYFVGQTNFNNLPDLYSMDFDNEAEIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431444;
- 90% Identity
- -
- 80% Identity
- -