Basic Information

Insect: Thereva unica
Gene Symbol: grau
Assembly: GCA_949987705.1
Location: OX465281.1:194880979-194889751[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00034 0.098 15.1 0.6 2 23 258 280 257 280 0.95

2 9 5.3 1.5e+03 1.9 0.1 6 23 289 306 289 306 0.96

3 9 8.9e-05 0.025 17.0 1.5 1 23 312 335 312 335 0.95

4 9 0.00055 0.16 14.5 3.6 1 23 343 365 343 365 0.95

5 9 0.13 38 7.0 0.4 3 23 375 396 373 396 0.91

6 9 0.012 3.4 10.3 1.0 1 23 402 424 402 424 0.95

7 9 0.00084 0.24 13.9 0.3 2 23 437 459 437 459 0.96

8 9 3e-05 0.0085 18.5 1.4 1 23 465 487 465 487 0.97

9 9 0.00012 0.034 16.6 3.7 1 23 493 516 493 516 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00034	0.098	15.1	0.6	2	23	258	280	257	280	0.95
2	9	5.3	1.5e+03	1.9	0.1	6	23	289	306	289	306	0.96
3	9	8.9e-05	0.025	17.0	1.5	1	23	312	335	312	335	0.95
4	9	0.00055	0.16	14.5	3.6	1	23	343	365	343	365	0.95
5	9	0.13	38	7.0	0.4	3	23	375	396	373	396	0.91
6	9	0.012	3.4	10.3	1.0	1	23	402	424	402	424	0.95
7	9	0.00084	0.24	13.9	0.3	2	23	437	459	437	459	0.96
8	9	3e-05	0.0085	18.5	1.4	1	23	465	487	465	487	0.97
9	9	0.00012	0.034	16.6	3.7	1	23	493	516	493	516	0.94

Sequence Information

Coding Sequence: atgacTTGTGGTGTGTGCTTGCGAGAGGATGTTGATGTTATTAACATATTTGGCGAGGAAGGAACAGAGCTACAAATATCGGCGATTATCAGACAGCATTTTTGGTTCGAGCCAATTGAAGATGATCAAATACTAAGCAGAATATGCAGCAGTTGCTGGGAGCAAATCGctaattttcatgttttttataCAAATGTAAAGACTGCGCACAAGAAGTTGACAGAACGTTACTATGCCAATGATCAGTACACCGGAGATGGATATGATCAGTATCAGCAAGGTGAATCTTCCAGTGGATATCAGGGCTGCAGCTACGGCTATGCTGATGCTAGCGAATCTTTCTTACAAGacaacaaaatcAAAGAAAGTGATAATTCCTGCTATAATGAAGATCACACCAACGATGAAGAAGGATCAAGTCTCTTTGATGCATCAAATAAAAACTCTATAAATGTCTATGATGAAAATTACGAagATCAAGACGTAACTGTATATGAAGGTGGTGAGGACGATGACGATTGTTTGTTGGAACAGGCGACATTtaAACCGGCTGAGGATTTTGATGAGAATACGAATCCATataattatggaaaaaaaataaagcaaaacagtacaaaaagtaaaaagaaacAACATGAAACAACAGATGAAATACAAATTATTGATCGTGATAGTTTAAGCTATAAAAAAGACCCAAGAAATCAATTAAAAGTAAGAGATGAAGCGCGTATTAAATTAGAAGATCAAGTTATTGCCAAATATGTTAAATTAGAGTGTGAAGAATGCCAGTCAAAATTCAATAGGTTTAGTGATCTCGTCAGGCATTATAATTCAGTCCATAACATGAGTGGATACGTAAGATGTTGTAACAGAAAACTTCCTAGTCGAGCATATGTTCTTGATCATATAAATAAACATAGGAATCCTGAAAGTTATAGaTGTAAGATTTGTCATAAGATGTTTGGTACACAGTATGCCATTAAAAATCATGTGGCTATTAAGCACCCACCAGAAGCAGAAAAGATATTTTCTTGTGATTTCTGTCCAGAAAAGTTCACAAATCAACATGCACTTAATCAGCATGCTTCTCATCACATTTCAGAAGATGAGAGACGAACTTATTGTATAGAATGTCGAAAATCattcCAAACCGTAGTAGCTTTACAAATGCATAAGAATGTTTATCACGGCCAATTGCAAGGTCACATTTGCCATGTTTGTGGCAAAATAATAAGGGGAAAATCCGTCTTCGCTAAACACGTAAATGAACATGCTGCAGAATTGGGACCAGTGGCCATCAACGATCCTGTGTGTCCAATCTGTGGCAAGCTTTCAGCTTCAATTAAAACTTTAAGACATCACATCAGATATGTGCATTCGTcacatcgtccacataaatGTGAAGTATGTGGGAAGGCCTTTAAAATTCGGCAAAAACTTAagGAACACATGGGTTCTCATGCTGTAGGAAATCCATTCCCGTGTCCTTATTGTCCAAAGCGATTTAGGAGTAAACTCCACCTATATTCTCATAAGTACCGTATGCATAAGGACGATTATGAGGAAGAGAAGCTTGTTCGTTTTAATTTGACGACTGAGACATTTAGTGGCAGCATGGAGTATAATTACGAGCATATGGATGAAAACGAAACCCAGCAATATGACGACAGTAGTATCGTTCTAAGTGAGGATAGTTCCCAGGATGACTGTTATGTTGTGGCCTAA
Protein Sequence: MTCGVCLREDVDVINIFGEEGTELQISAIIRQHFWFEPIEDDQILSRICSSCWEQIANFHVFYTNVKTAHKKLTERYYANDQYTGDGYDQYQQGESSSGYQGCSYGYADASESFLQDNKIKESDNSCYNEDHTNDEEGSSLFDASNKNSINVYDENYEDQDVTVYEGGEDDDDCLLEQATFKPAEDFDENTNPYNYGKKIKQNSTKSKKKQHETTDEIQIIDRDSLSYKKDPRNQLKVRDEARIKLEDQVIAKYVKLECEECQSKFNRFSDLVRHYNSVHNMSGYVRCCNRKLPSRAYVLDHINKHRNPESYRCKICHKMFGTQYAIKNHVAIKHPPEAEKIFSCDFCPEKFTNQHALNQHASHHISEDERRTYCIECRKSFQTVVALQMHKNVYHGQLQGHICHVCGKIIRGKSVFAKHVNEHAAELGPVAINDPVCPICGKLSASIKTLRHHIRYVHSSHRPHKCEVCGKAFKIRQKLKEHMGSHAVGNPFPCPYCPKRFRSKLHLYSHKYRMHKDDYEEEKLVRFNLTTETFSGSMEYNYEHMDENETQQYDDSSIVLSEDSSQDDCYVVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -