Tuni045255.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465283.1:63518176-63536193[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00025 0.072 15.6 3.0 1 23 253 275 253 275 0.96 2 11 0.00022 0.065 15.7 1.5 3 23 280 300 278 300 0.95 3 11 9.9e-05 0.029 16.8 0.2 1 23 307 329 307 329 0.97 4 11 6.1 1.7e+03 1.8 5.9 1 23 333 355 333 355 0.83 5 11 0.039 11 8.7 0.6 2 23 371 393 370 393 0.90 6 11 0.017 5 9.8 1.3 5 23 403 421 400 421 0.95 7 11 3e-06 0.00085 21.6 1.7 1 23 426 448 426 448 0.98 8 11 4.5e-06 0.0013 21.0 1.7 1 23 454 476 454 476 0.96 9 11 0.00016 0.047 16.1 1.7 1 23 482 504 482 504 0.99 10 11 4.2e-07 0.00012 24.3 2.6 1 23 510 533 510 533 0.98 11 11 0.33 95 5.7 0.0 2 19 535 552 535 553 0.93
Sequence Information
- Coding Sequence
- atggaTGAAATAACTAGAAATGGAGCGGTGTTTCTTCTTGAGGATCTAATAGAAACTGACCTAAATGATCTCTGTCGAATATGTGGAAGTACCTCTGGGGAGACCTTGGTGTCAATATTTGATAATTTGCCGACTCCAGATCTACCAGCAAAAATTATGAAGTATTTGCCGATAGAAGTCCATAAAAAGGATAATCTTCCGTTGAATGCTTGCGTAGATTGCGTGCATAGCATTTTTGAATGGCATCATTTCTATGAAAATTGTTCGGAAGCCAATGCAAAAATGCAGACCTTATTCCTAGATAGTAAACCATCTGAAGACATCGTTGTGCAGAACAATGGAGACGAAACATCTGCGGTATATATTGAAAACTCTAATCTTGAAGATGATCCGCATTACAGCCCCATGAATGAAGTTAATCAAGCGGAAGAATCATGCACATCCTTCAGCAATGCCGAAAATACGGATCCCATATGTGATGAAAAATCGGATAATGAAAATGAGATTCTAATAGAGGAAAATATAAAAGGCGAAGATATAGAGAACGTGTTTACTGAAGGCAGTGATTACCAAGTTGAAACTGAAGAATCTGATTACTCACAAAACATTTGCACACAAGAAGTAATTTACCAACCGTGTGGAACGGAAATAACAAGCTCCCCGGAAATACGTGATTACCATACAGAATTGATAAACGTTAAATGTGAGTTCTATAATACCACCTGTGATGAAAACTTTTCTAAAATAGAAGCAGAGCACGAATGCCAAATTTGTACAGAAAAATTCTTCAATAAAATGGACCTTCGCAGGCATATAACACAGCACAAAACAATTATATGCTATCTCTgtaataaaatgtttaaaaccTATACAAATCTACTAAGCCATAAAAAGCTTCATTTTGAACCCTCGCAAACATTTGACTGTCCAATCTGTGGTTGGAATATGAACCGAAGATTTAATCTGCAAATGCATATAAACTCGCATACCGCTGATCACCCATGTAAAATTTGCTGCAAGAGTTTTAATAGCGATCTGATTTTATCACACCACAGATTAACACATTCCAAGGAAGATCTTGAAAGTTATGAAATTATAAAGGCGTCTGTTAAATGTGACAGTTGTGAAGAGGAGTTCAGTTCGAAATTTAAGCTTTATATGCATAAAATAGCTCAGCATAGCGAAGATGGCCCAAGATATACTTGCCATTGCGGAAGAATATTCGAGACTGAAGTGATGCTTAAAAGTCACGAAAAAAGTCATATGGATGCGAATTTTGTTTGCGAAGTATGCaataagaaatttaagaaattacGTAACTTAGAGGAACATCGAAATACTCATTTAGAAAATCGACCCTTTAAATGTGATGTTTGtgataaacaatttaaatatagTAGCAACCTTTCGCAGCATAAGGCTTTACATAAGGGTGTTAAAAACTATAAGTGCATGTACTGCGAAAAGAAATTTCTGAGATCGAACACTCTTGCTGCACATTTAAAGACACATGAAAACTTGCGAAATTTTAAGTGTGAGCATTGTGGTATTTCATTTGTCCAATCGAGTACTCTGATGAAGCATAAGAAGACAATCCATCGCACTTGTGATTATTGTGGGGTAATGGTTGGTGATAAAAAGCAATGGCAAATTCATGTTTGGAAAAAATGTACAAATGCAAAAAATATAGAATTTAATAATAAGCTCAAGTCGTAA
- Protein Sequence
- MDEITRNGAVFLLEDLIETDLNDLCRICGSTSGETLVSIFDNLPTPDLPAKIMKYLPIEVHKKDNLPLNACVDCVHSIFEWHHFYENCSEANAKMQTLFLDSKPSEDIVVQNNGDETSAVYIENSNLEDDPHYSPMNEVNQAEESCTSFSNAENTDPICDEKSDNENEILIEENIKGEDIENVFTEGSDYQVETEESDYSQNICTQEVIYQPCGTEITSSPEIRDYHTELINVKCEFYNTTCDENFSKIEAEHECQICTEKFFNKMDLRRHITQHKTIICYLCNKMFKTYTNLLSHKKLHFEPSQTFDCPICGWNMNRRFNLQMHINSHTADHPCKICCKSFNSDLILSHHRLTHSKEDLESYEIIKASVKCDSCEEEFSSKFKLYMHKIAQHSEDGPRYTCHCGRIFETEVMLKSHEKSHMDANFVCEVCNKKFKKLRNLEEHRNTHLENRPFKCDVCDKQFKYSSNLSQHKALHKGVKNYKCMYCEKKFLRSNTLAAHLKTHENLRNFKCEHCGISFVQSSTLMKHKKTIHRTCDYCGVMVGDKKQWQIHVWKKCTNAKNIEFNNKLKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431325;
- 90% Identity
- iTF_01431325;
- 80% Identity
- -