Tuni007199.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:4167118-4172874[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00028 0.082 15.4 6.6 1 23 337 359 337 359 0.98 2 10 0.0024 0.69 12.5 4.4 2 23 365 386 364 386 0.97 3 10 0.00015 0.042 16.3 3.3 2 23 394 415 394 415 0.97 4 10 0.33 94 5.8 4.6 1 19 423 441 423 441 0.88 5 10 4.7e-05 0.013 17.9 2.0 1 23 454 476 454 476 0.98 6 10 3.7e-06 0.0011 21.3 2.4 2 23 482 503 481 503 0.97 7 10 7.8e-05 0.022 17.2 1.6 2 23 510 532 509 532 0.95 8 10 2.7e-06 0.00077 21.7 0.5 3 23 543 563 541 563 0.96 9 10 4e-06 0.0012 21.2 3.5 2 23 569 590 569 590 0.98 10 10 0.059 17 8.1 3.2 1 23 596 620 596 620 0.92
Sequence Information
- Coding Sequence
- ATGGATACTCTATGCCGAATTTGCATTGAAAAGGCGGAAAAATGGACCTCGCTAAGCTCTAAAATCGAAGAATCCTCAAACCTGTCGCTCTTTGATTTCCTTAATAAGTGCACAACTCTAAATGCACGTGAAGGTGATAAGCTGCCGCAATGCATTTGCTCAGTCTGTGATAATGCCatgaaaatgttttattcattCATGAAACGGGCTGAGAAATCTGATCTAATCTTGAGGGAAGGTTTAAAGAAGCTAGTTGCAGAAGGAGGACACAACGGCTGCAAAGAAACTCCTTGTGAGGAAAGTGcaaaaagaaagaagatatcGGAAGAACCATGCATATCCGAGGAGAGTACATCAATTGTTGCTGTGAAAAAAGCTGTAATTAATGAAAGCGAAGATTTTGAATCGAATCTTAATCATCCGGAAAAGAGCAACGAGGAACCTGATGACGTTTCATCACATAGACATCGTCGTATAACGGGCATTGATACGTCGGAGCTTACTGTTTCTGAGAATGGCGTTCCCACAAGTGCATTGAAAAGGATATTGGCTAAAAGTAAGGATGAGGCTAATTCTCAAAGAAACTCCTGCGAGGGAATAAGAAAAGAGACGATCGAGgCAGAGGAGTCTGAAGATTTCAACCAGGGCGACTCCTTTCATTGTCAGCCAAGTAAAAACTCAACTGGATCATTCCCTTATGTTCTGGATATTGTGAAGGAAGAGCCACGCGTATCCGAAAGTACATCAATTGTTGCTGTAAAAGATGCTGTGATTAATGAAAGTGAAAATTCGGAATCTAATCTAGATCATCCCAAGGAGAAGGCCGAGAAATTTGTTGATATTTTATCATGCAAAATTAGTAGTCCATCGAGCAGTGATGCAGAGCAAACCGATTCTGAGGATGACGTACCAATTGGTTTGTTGGAAAAGAGATTGGCTAAAAATGGGAATGAAACGGACTCTCAAAGAAATTCTTCCAAGGGAAAAACAAGAAAGAAGATGATTGCGCATGAATGCGAGACATGCGgtaaaaaatttcttaaaaaacaCAACCTCAAGAACCATCTCAAAACTCACAAGAAGAAAAGACTGAAATGCGAAAAGTGCGACCAGGAATTTGAGCACATCAAAAAGCTACACCGGCACATGGACTCGCACGCAGATCCGTTAAAGCCTGAACAATGCAAGCAATGTGGCAAGATATTAAAACACCGGCAAAGTCTACTCAGGCACATGCAATTGCACACAAATCCAAATCGGTACCCGTTTAAGTGTGAACACTGCAAAGAGTCATTCGCTAAAGAATCGAGCTGCCAGAATCATCCTTGTTATAAGCGCGTctataagaaaaagaaaaggttCGAATGCGAAATTTGCGGAAAACATTTTTCTAAAGACTATCTTAATAATGTTCATATGAAAAGTCACAAAGGGatcaaaattaaatgcaatcaGTGCGGCAAGGAATTTATGCACAGGGATAGCTTAAGCAGGCACATGAAATGGCACGATAATCCAGATGCGAGTAAGTGTGAAATCTGTGACAAGTCGCTTTCTAGTAAAGAGAGTTACGCTAGGCATATGGAGCTATGTCACCTAGAGCTATCGGAAAATTCGAAAATTAATTGCGAAAAATGCGATAAAAGTTTTAGTACAAAATATTACCTcgatcttcatatggaaatacACAACGGGATTACACGAAAATGCGATAAGTGCGGCCAGGAATTTAAGCACAAGGATAGTCTGAGTAGGCACATGAAGTGGCATAATAATCCAACCCCGTTTAAGTGTGAAAAATGTGAAGGGTTGTTTGATAGGAAATACAAATACAATAGCCATATCAAAATTTGTATACATGCAGGTAAACAGCAGCAATTGAAGACTGAATAG
- Protein Sequence
- MDTLCRICIEKAEKWTSLSSKIEESSNLSLFDFLNKCTTLNAREGDKLPQCICSVCDNAMKMFYSFMKRAEKSDLILREGLKKLVAEGGHNGCKETPCEESAKRKKISEEPCISEESTSIVAVKKAVINESEDFESNLNHPEKSNEEPDDVSSHRHRRITGIDTSELTVSENGVPTSALKRILAKSKDEANSQRNSCEGIRKETIEAEESEDFNQGDSFHCQPSKNSTGSFPYVLDIVKEEPRVSESTSIVAVKDAVINESENSESNLDHPKEKAEKFVDILSCKISSPSSSDAEQTDSEDDVPIGLLEKRLAKNGNETDSQRNSSKGKTRKKMIAHECETCGKKFLKKHNLKNHLKTHKKKRLKCEKCDQEFEHIKKLHRHMDSHADPLKPEQCKQCGKILKHRQSLLRHMQLHTNPNRYPFKCEHCKESFAKESSCQNHPCYKRVYKKKKRFECEICGKHFSKDYLNNVHMKSHKGIKIKCNQCGKEFMHRDSLSRHMKWHDNPDASKCEICDKSLSSKESYARHMELCHLELSENSKINCEKCDKSFSTKYYLDLHMEIHNGITRKCDKCGQEFKHKDSLSRHMKWHNNPTPFKCEKCEGLFDRKYKYNSHIKICIHAGKQQQLKTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -