Tuni026135.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- -
- Assembly
- GCA_949987705.1
- Location
- OX465281.1:194902968-194906240[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.001 0.29 13.7 0.1 2 23 404 426 403 426 0.96 2 10 1.9 5.5e+02 3.3 0.3 6 23 435 452 435 452 0.98 3 10 4e-07 0.00012 24.4 0.8 1 23 458 480 458 480 0.98 4 10 0.0033 0.95 12.0 0.6 1 23 488 510 488 510 0.95 5 10 6.8e-06 0.0019 20.5 1.8 1 23 518 541 518 541 0.97 6 10 0.00039 0.11 14.9 1.2 2 23 548 569 547 569 0.96 7 10 0.0017 0.49 12.9 1.5 2 23 578 599 577 599 0.97 8 10 4.8e-05 0.014 17.8 0.3 1 23 606 629 606 629 0.95 9 10 1.3e-06 0.00038 22.7 1.6 2 23 636 657 635 657 0.97 10 10 2.3e-06 0.00065 22.0 1.8 1 23 663 686 663 686 0.98
Sequence Information
- Coding Sequence
- ATGTCCAGTAATGAGAATTGTACGCCCCCAGAACTTATTGACTTAGCAAATAAGACGATACTAGAGTTACTACCTACCAAATCCAAGGAAGTATATCTACATTCTTACGAACAATTTATGGATTGGCGTAAAACCAAAAATACGAACTCTTTTTCGGAAAATGTTTTTCTCGCATATTTTACTGGATTATGTAATACAATGAAGTCTTCAACATTGTGGAAGGTGTACTCGATGTTACGTACAACATTCAATATTAAACATAATATTGATTTGTCACAATATGCAAAATTACGTGCATTCTTAAAAAAACAGGCGTCTGATTTCCaagcaaaaaaatcaaaaattttaacagCCGAACAAGTGAATAGCTTTATATTTGAAGCACCAGATATTTTATACCTTGGTACAAAGGTTGTGTTAATTGTAGGTGTCATGGGTGCCTGTAGAAAAATTGAGTTGTATCAAATGAAGATACAAAATATACAAGACCTGGGTACTGCTGTTCTTATAACTGTACcagatacaaaaacaaaaatttgcagaaaatttacaataacaggaaaattttatgaCCTGTTTAAAAAATATGCCAATCTCCGCCCCACTATAGCTGAcgtagataatttttttttaaattatcaaaaagGGCGTTGTACCAAGCAAGTGATGGGAATTAACAAAATGGGTGCTATCCCAAAACAAGTGGCAACGTTTTTAAAACTTCCAAATCCCGAGCTATACACAGGCCATTGTTTCAGAAGAACATCTGCCACAATGTTAGTTGATGCAGGCGGCGACATTACGACGTTAAAGCGTCATGGAGGTTGGAAGTCAACGGAAGTAGCAGAAGGCTATATTGATAATTCCTTAAATAACAGAATAAATATATCTGATAAACTACTTACACATATAACTGAACCTGAAACAACGCCAAACACATCCAAAGAATTGGAAGAAATGCCCAAGGATACAGCTAATGATGAAGACTTTGCCGAGAAACTGGTTCCACGTGCAGAAGATGAATTATTAAAAGTACAGAGTCGACGGGAGGGACGAAAATGTGCAAACCGAAAAGAAAGTGAGAATAGGAACAATAGCTCTCCAGAAGACACTTCAAGACAAAGTGATTTAAAGGAGAAAAATAGAGGTCCGAAAGACTTAAAAACATCCCAAGAATATGACGAAACAATAGCAAAGCATATGAAGTTAAAATGTGAAATTTGTGGTGAGGAATTTAGTGTATTTGCAGAAGTCACCGAACATTATCGAAGTGTGCATAAACGAAAAGGTTATGTGGTTTGCTGCAAGAAAAAACTACGCGATAGAGTCTCTATAATGGATCATATTAACAAACACCTTAATCCAGATTATTTTAAatgtaCAGAATGCAATAAAGTATTTTCGGATAGGCAAGGTCTTGCAACGCATATGCTTCGACATGTGTCTGAAGAAgctaaaatttataaatgtgaaaaatgtcCACGCAGATACGCTAAACAGTTTTTGCTTGATATACACAAAGTGATACATACACCGCAAGAAGAGAGGGAGTTTTTCTGCGACGACTGCGGGAAGGCATTTCCTACACATAACTTACTCATCATTCATCACCGTACTGTGCATGAAAATGCATATGGACAAACTTGTCATATCTGTGGAAAAGTTATCAGAGGAAAAGCATTGTTCAAGAAACATCAGCTAGAACATGAAGGTGTGGTTGAGCCAAAAGTACAATGTCAAAAATGTGGTGTATGGCTAAAGCATGCCTATAGCTTAAGGAGACATATGCGATATCATGTTGAAAAGCTAAGCACTCATATTTGTAGCATATGCGGTAAAACTGCTCCTTCAAAAAGTGCTTTGCGAGATCATGTTCGATATGTCCACGAACCAGAACGTTCATTACAATGCAGTGTTTGCGACAAAACTTTTAAAAGGCCAAAACGTCTTAGgGAACATATGACAACGCACACAGGTGAACCGTTATATACTTGTCCTTATTGTCCAAAAACTTTCAACTCAAGTGGAAATATGTACACGCATAGAAAAAAACTACATAGAAAAGAATGGGAAGAAAGCCGAAAGAGTCGTGGTTTACCAACTTCTGATACAAAATTAATTGATTCAGAAACAGATTAA
- Protein Sequence
- MSSNENCTPPELIDLANKTILELLPTKSKEVYLHSYEQFMDWRKTKNTNSFSENVFLAYFTGLCNTMKSSTLWKVYSMLRTTFNIKHNIDLSQYAKLRAFLKKQASDFQAKKSKILTAEQVNSFIFEAPDILYLGTKVVLIVGVMGACRKIELYQMKIQNIQDLGTAVLITVPDTKTKICRKFTITGKFYDLFKKYANLRPTIADVDNFFLNYQKGRCTKQVMGINKMGAIPKQVATFLKLPNPELYTGHCFRRTSATMLVDAGGDITTLKRHGGWKSTEVAEGYIDNSLNNRINISDKLLTHITEPETTPNTSKELEEMPKDTANDEDFAEKLVPRAEDELLKVQSRREGRKCANRKESENRNNSSPEDTSRQSDLKEKNRGPKDLKTSQEYDETIAKHMKLKCEICGEEFSVFAEVTEHYRSVHKRKGYVVCCKKKLRDRVSIMDHINKHLNPDYFKCTECNKVFSDRQGLATHMLRHVSEEAKIYKCEKCPRRYAKQFLLDIHKVIHTPQEEREFFCDDCGKAFPTHNLLIIHHRTVHENAYGQTCHICGKVIRGKALFKKHQLEHEGVVEPKVQCQKCGVWLKHAYSLRRHMRYHVEKLSTHICSICGKTAPSKSALRDHVRYVHEPERSLQCSVCDKTFKRPKRLREHMTTHTGEPLYTCPYCPKTFNSSGNMYTHRKKLHRKEWEESRKSRGLPTSDTKLIDSETD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -